ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467437.1| Oryza sativa (japonica cultivar-group), mRNA 101 8e-19
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 8e-19
3dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 101 8e-19
4dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 8e-19
5ref|XM_743362.1| Aspergillus fumigatus Af293 hypothetical protei... 42 0.63
6ref|NM_187895.1| Oryza sativa (japonica cultivar-group), Ozsa833... 40 2.5
7ref|XM_463372.1| Oryza sativa (japonica cultivar-group), predic... 40 2.5
8gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 40 2.5
9dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
11gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 o... 40 2.5
12dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
13dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
14dbj|AK107371.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
15ref|XM_482065.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.8
16ref|XM_507704.1| PREDICTED: Pan troglodytes similar to myosin II... 38 9.8
17ref|NM_017433.3| Homo sapiens myosin IIIA (MYO3A), mRNA 38 9.8
18gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosom... 38 9.8
19ref|XM_959008.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.8
20ref|XM_329296.1| Neurospora crassa OR74A hypothetical protein (N... 38 9.8
21ref|XM_756594.1| Ustilago maydis 521 hypothetical protein (UM055... 38 9.8
22emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 38 9.8
23gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence 38 9.8
24gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 ma... 38 9.8
25emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chr... 38 9.8
26emb|AL512330.13| Human DNA sequence from clone RP11-334N17 on ch... 38 9.8
27emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on ch... 38 9.8
28emb|AL353618.11| Human DNA sequence from clone RP11-550K21 on ch... 38 9.8
29gb|AY436326.1| Homo sapiens angiotensin I converting enzyme (pep... 38 9.8
30emb|AJ006985.1|SGAJ6985 Streptomyces glaucescens GLA.0 gene clus... 38 9.8
31gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of... 38 9.8
32gb|AY101367.1| Homo sapiens myosin IIIA (MYO3A) mRNA, complete cds 38 9.8
33dbj|AB229438.1| Aspergillus oryzae cDNA, contig sequence: AoEST6318 38 9.8
34dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 38 9.8
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
36emb|Y08764.1|SGY08764 Streptomyces glaucescens strO gene for N-a... 38 9.8
37dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 9.8
38gb|AF229172.1|AF229172 Homo sapiens class III myosin (MYO3A) mRN... 38 9.8
39dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 9.8
40dbj|AB114903.1| Mus musculus Lmbr1 gene for LMBR1L, partial cds 38 9.8
41dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.8
42ref|XM_317626.2| Anopheles gambiae str. PEST ENSANGP00000019120 ... 38 9.8
43gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 38 9.8
44gb|AY109523.1| Zea mays CL765_1 mRNA sequence 38 9.8
45gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequ... 38 9.8
46emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbos... 38 9.8
47gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 38 9.8
48gb|AE017221.1| Thermus thermophilus HB27, complete genome 38 9.8
49gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome... 38 9.8 
>ref|XM_467437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score =  101 bits (51), Expect = 8e-19
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 122 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 181
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                          
Query: 182 gcgtcacggcggagg 196
            ||||||||||||||
Sbjct: 298 ccgtcacggcggagg 312
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 8e-19
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                            
Query: 122      cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 181
                ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 29513959 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 29513900

                               
Query: 182      gcgtcacggcggagg 196
                 ||||||||||||||
Sbjct: 29513899 ccgtcacggcggagg 29513885
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>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1038_A06
          Length = 147836

 Score =  101 bits (51), Expect = 8e-19
 Identities = 69/75 (92%)
 Strand = Plus / Minus

                                                                          
Query: 122    cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 181
              ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 108989 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 108930

                             
Query: 182    gcgtcacggcggagg 196
               ||||||||||||||
Sbjct: 108929 ccgtcacggcggagg 108915
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>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full
           insert sequence
          Length = 3793

 Score =  101 bits (51), Expect = 8e-19
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 122 cgatggagagccccgtgaaggaggaggtcggcggggagctggcgatggagatcgagtcga 181
           ||||||||||||||| |||||||||||  || |||||||||||||||||||||||||| |
Sbjct: 238 cgatggagagccccgcgaaggaggaggcgggaggggagctggcgatggagatcgagtcca 297

                          
Query: 182 gcgtcacggcggagg 196
            ||||||||||||||
Sbjct: 298 ccgtcacggcggagg 312
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>ref|XM_743362.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g01340)
           partial mRNA
          Length = 441

 Score = 42.1 bits (21), Expect = 0.63
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 154 ggggagctggcgatggagatc 174
           |||||||||||||||||||||
Sbjct: 343 ggggagctggcgatggagatc 363
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>ref|NM_187895.1| Oryza sativa (japonica cultivar-group), Ozsa8337 predicted mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 144 ggaggtcggcggggagctgg 163
           ||||||||||||||||||||
Sbjct: 45  ggaggtcggcggggagctgg 64
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>ref|XM_463372.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 ggaggaggtcggcggggagc 160
           ||||||||||||||||||||
Sbjct: 604 ggaggaggtcggcggggagc 585
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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctctaaaccctagcggcatc 85
            ||||||||||||||||||||
Sbjct: 6518 ctctaaaccctagcggcatc 6537
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ggaggtcggcggggagctgg 163
             ||||||||||||||||||||
Sbjct: 46047 ggaggtcggcggggagctgg 46028
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 141      ggaggaggtcggcggggagc 160
                ||||||||||||||||||||
Sbjct: 23405412 ggaggaggtcggcggggagc 23405393



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ggaggtcggcggggagctgg 163
               ||||||||||||||||||||
Sbjct: 8470894 ggaggtcggcggggagctgg 8470875
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>gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 of the complete
            genome
          Length = 11578

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  tcggcggggagctggcgatg 168
            ||||||||||||||||||||
Sbjct: 9444 tcggcggggagctggcgatg 9463
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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ggaggtcggcggggagctgg 163
             ||||||||||||||||||||
Sbjct: 85849 ggaggtcggcggggagctgg 85830
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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1103C09
          Length = 163996

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    ggaggaggtcggcggggagc 160
              ||||||||||||||||||||
Sbjct: 131110 ggaggaggtcggcggggagc 131091
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>dbj|AK107371.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B04, full
           insert sequence
          Length = 1894

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 ggaggaggtcggcggggagc 160
           ||||||||||||||||||||
Sbjct: 679 ggaggaggtcggcggggagc 660
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>ref|XM_482065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1035

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 146 aggtcggcggggagctggc 164
           |||||||||||||||||||
Sbjct: 665 aggtcggcggggagctggc 647
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>ref|XM_507704.1| PREDICTED: Pan troglodytes similar to myosin IIIA; deafness,
           autosomal recessive 30 (LOC450360), mRNA
          Length = 894

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 126 ggagagccccgtgaaggaggagg 148
           ||||||||||| |||||||||||
Sbjct: 203 ggagagccccgagaaggaggagg 225
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>ref|NM_017433.3| Homo sapiens myosin IIIA (MYO3A), mRNA
          Length = 5597

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 126  ggagagccccgtgaaggaggagg 148
            ||||||||||| |||||||||||
Sbjct: 4909 ggagagccccgagaaggaggagg 4931
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>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence
          Length = 212172

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 127    gagagccccgtgaaggaggaggt 149
              |||||||||||||| ||||||||
Sbjct: 177696 gagagccccgtgaaagaggaggt 177718
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>ref|XM_959008.1| Neurospora crassa OR74A hypothetical protein (NCU02107.1) partial
           mRNA
          Length = 1734

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 135 cgtgaaggaggaggtcggcgggg 157
           ||||||||||| |||||||||||
Sbjct: 616 cgtgaaggaggtggtcggcgggg 594
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>ref|XM_329296.1| Neurospora crassa OR74A hypothetical protein (NCU02107.1) partial
           mRNA
          Length = 1734

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 135 cgtgaaggaggaggtcggcgggg 157
           ||||||||||| |||||||||||
Sbjct: 616 cgtgaaggaggtggtcggcgggg 594
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>ref|XM_756594.1| Ustilago maydis 521 hypothetical protein (UM05540.1) partial mRNA
          Length = 6357

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 135 cgtgaaggaggaggtcggc 153
           |||||||||||||||||||
Sbjct: 634 cgtgaaggaggaggtcggc 616
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 107   gccagatcgccgccgcgat 125
             |||||||||||||||||||
Sbjct: 35456 gccagatcgccgccgcgat 35438
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>gb|AC091001.3| Papio anubis clone RP41-36M16, complete sequence
          Length = 177066

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 144   ggaggtcggcggggagctg 162
             |||||||||||||||||||
Sbjct: 43136 ggaggtcggcggggagctg 43118
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>gb|AC058788.89| Mus musculus strain C57BL/6J clone rp23-284a9 map 5, complete sequence
          Length = 200015

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 127    gagagccccgtgaaggaggaggt 149
              |||||||||||||| ||||||||
Sbjct: 104258 gagagccccgtgaaagaggaggt 104280
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>emb|AL590128.11| Human DNA sequence from clone RP11-312B8 on chromosome 1 Contains a novel
              gene, the 5' end of the CAMTA1 gene for calmodulin binding
              transcription activator 1, a ribosomal protein L37 (RPL37)
              pseudogene and a CpG island, complete sequence
          Length = 204394

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     ggggctcctctctctggcc 57
              |||||||||||||||||||
Sbjct: 203689 ggggctcctctctctggcc 203707
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>emb|AL512330.13| Human DNA sequence from clone RP11-334N17 on chromosome 1 Contains a
            novel gene, complete sequence
          Length = 61505

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   ggggctcctctctctggcc 57
            |||||||||||||||||||
Sbjct: 1295 ggggctcctctctctggcc 1313
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>emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on chromosome 10 Contains the
             GAD2 gene for glutamate decarboxylase 2 (pancreatic islets
             and brain 65kDa), the 3' end of the MYO3A gene for myosin
             IIIA and two CpG islands, complete sequence
          Length = 175594

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 126   ggagagccccgtgaaggaggagg 148
             ||||||||||| |||||||||||
Sbjct: 41821 ggagagccccgagaaggaggagg 41843
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>emb|AL353618.11| Human DNA sequence from clone RP11-550K21 on chromosome 6, complete
             sequence
          Length = 32451

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    ggggctcctctctctggcc 57
             |||||||||||||||||||
Sbjct: 23256 ggggctcctctctctggcc 23238
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>gb|AY436326.1| Homo sapiens angiotensin I converting enzyme (peptidyl-dipeptidase A) 1
             (ACE) gene, complete cds
          Length = 23424

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    ggcagggaggcccgccggg 104
             |||||||||||||||||||
Sbjct: 16351 ggcagggaggcccgccggg 16369
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>emb|AJ006985.1|SGAJ6985 Streptomyces glaucescens GLA.0 gene cluster for 5'-hydroxystreptomycin
             biosynthesis
          Length = 25459

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 144   ggaggtcggcggggagctg 162
             |||||||||||||||||||
Sbjct: 24961 ggaggtcggcggggagctg 24979
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>gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of the complete genome
          Length = 11211

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 105  gagccagatcgccgccgcg 123
            |||||||||||||||||||
Sbjct: 3413 gagccagatcgccgccgcg 3431
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>gb|AY101367.1| Homo sapiens myosin IIIA (MYO3A) mRNA, complete cds
          Length = 5593

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 126  ggagagccccgtgaaggaggagg 148
            ||||||||||| |||||||||||
Sbjct: 4921 ggagagccccgagaaggaggagg 4943
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>dbj|AB229438.1| Aspergillus oryzae cDNA, contig sequence: AoEST6318
          Length = 516

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 80  ggcatcggcagggaggcccgccg 102
           ||||| |||||||||||||||||
Sbjct: 456 ggcattggcagggaggcccgccg 434
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>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103
          Length = 1282697

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 80    ggcatcggcagggaggcccgccg 102
             ||||| |||||||||||||||||
Sbjct: 86718 ggcattggcagggaggcccgccg 86740
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 146      aggtcggcggggagctggc 164
                |||||||||||||||||||
Sbjct: 17531559 aggtcggcggggagctggc 17531577
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>emb|Y08764.1|SGY08764 Streptomyces glaucescens strO gene for
           N-amidino-scyllo-inosamine-4-phosphate phosphatase
          Length = 933

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 144 ggaggtcggcggggagctg 162
           |||||||||||||||||||
Sbjct: 435 ggaggtcggcggggagctg 453
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 110     agatcgccgccgcgatggagagc 132
               |||||||||||||| ||||||||
Sbjct: 7219355 agatcgccgccgcggtggagagc 7219333
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>gb|AF229172.1|AF229172 Homo sapiens class III myosin (MYO3A) mRNA, complete cds,
            alternatively spliced
          Length = 5035

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 126  ggagagccccgtgaaggaggagg 148
            ||||||||||| |||||||||||
Sbjct: 4918 ggagagccccgagaaggaggagg 4940
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 141     ggaggaggtcggcggggag 159
               |||||||||||||||||||
Sbjct: 1349376 ggaggaggtcggcggggag 1349394
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>dbj|AB114903.1| Mus musculus Lmbr1 gene for LMBR1L, partial cds
          Length = 104485

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 127   gagagccccgtgaaggaggaggt 149
             |||||||||||||| ||||||||
Sbjct: 28336 gagagccccgtgaaagaggaggt 28358
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>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0436B06
          Length = 148947

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  aggtcggcggggagctggc 164
            |||||||||||||||||||
Sbjct: 8209 aggtcggcggggagctggc 8227
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>ref|XM_317626.2| Anopheles gambiae str. PEST ENSANGP00000019120 (ENSANGG00000016631),
            partial mRNA
          Length = 1782

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 131  gccccgtgaaggaggaggt 149
            |||||||||||||||||||
Sbjct: 1364 gccccgtgaaggaggaggt 1382
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 111     gatcgccgccgcgatggag 129
               |||||||||||||||||||
Sbjct: 2171534 gatcgccgccgcgatggag 2171516
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>gb|AY109523.1| Zea mays CL765_1 mRNA sequence
          Length = 1412

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 129 gagccccgtgaaggaggaggtcg 151
           |||||||||||| ||||||||||
Sbjct: 314 gagccccgtgaaagaggaggtcg 292
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>gb|AC151487.3| Aotus nancymaae clone CH258-321B24, complete sequence
          Length = 167396

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     actggggctcctctctctg 54
              |||||||||||||||||||
Sbjct: 118284 actggggctcctctctctg 118302
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>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster,
            strain SE50/110
          Length = 41323

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 147  ggtcggcggggagctggcg 165
            |||||||||||||||||||
Sbjct: 4793 ggtcggcggggagctggcg 4811
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 142     gaggaggtcggcggggagc 160
               |||||||||||||||||||
Sbjct: 2685706 gaggaggtcggcggggagc 2685724



 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 141     ggaggaggtcggcggggag 159
               |||||||||||||||||||
Sbjct: 1763588 ggaggaggtcggcggggag 1763570
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 141     ggaggaggtcggcggggag 159
               |||||||||||||||||||
Sbjct: 1025818 ggaggaggtcggcggggag 1025836
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>gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome 5, complete sequence
          Length = 185497

 Score = 38.2 bits (19), Expect = 9.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 127    gagagccccgtgaaggaggaggt 149
              |||||||||||||| ||||||||
Sbjct: 108258 gagagccccgtgaaagaggaggt 108236


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,290,384
Number of Sequences: 3902068
Number of extensions: 1290384
Number of successful extensions: 100813
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99641
Number of HSP's gapped (non-prelim): 1172
length of query: 197
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 175
effective length of database: 17,147,199,772
effective search space: 3000759960100
effective search space used: 3000759960100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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