>NIPA_PONPY (Q5R8V9) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (Zinc finger
           C3HC-type protein 1)
          Length = 502

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +1

Query: 277 SLSTNAVGAAMDFSQPSCRPWERGDLLHRLATFKPSTWASKPKAASSLACAQRGWV 444
           S ++ +V  +    QPS     +     R+ TF    WA KP   S L CA+ GWV
Sbjct: 53  SATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPPELSPLVCAKYGWV 108

>NIPA_HUMAN (Q86WB0) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (hNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 502

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +1

Query: 277 SLSTNAVGAAMDFSQPSCRPWERGDLLHRLATFKPSTWASKPKAASSLACAQRGWV 444
           S ++ +V  +    QPS     +     R+ TF    WA KP   S L CA+ GWV
Sbjct: 53  SATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWV 108

>NIPA_MOUSE (Q80YV2) Nuclear-interacting partner of ALK (Nuclear-interacting|
           partner of anaplastic lymphoma kinase) (mNIPA) (Zinc
           finger C3HC-type protein 1)
          Length = 501

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +1

Query: 358 HRLATFKPSTWASKPKAASSLACAQRGWV 444
           HR+ TF    WA KP   S L CA+ GWV
Sbjct: 80  HRVETFSSLKWAGKPPELSPLICAKYGWV 108

>TILS_PROMM (Q7V987) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 343

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 4   IPTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 117
           I  R+ L   WL+ +  PS PA++ E  S S AP  PP
Sbjct: 282 ITARTTLLAYWLKRSGAPSLPAVQLEQISQSIAPGKPP 319

>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 317 HNHHVDHGNEEIYFIDWPHLSLQHGLLNQRLLVH 418
           H+HH  H  ++ Y   + H + Q  +L Q+ L+H
Sbjct: 488 HHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMH 521

>AKR1_ASHGO (Q755Y0) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 724

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/67 (22%), Positives = 27/67 (40%)
 Frame = -1

Query: 440 QPL*AQASELAAFGLEAHVEGLNVASR*SKSPRSHGLHDGCEKSIAAPTALVLREG*AAC 261
           QP+ +        G E H+ G ++A    K P     H  C++        ++  G    
Sbjct: 23  QPIVSDVPAAEDVGDEDHISGASIAENRPKDPTLVKYHAACQRGDLKTVKDMIEAGVIDV 82

Query: 260 EATWDDD 240
           +A WD++
Sbjct: 83  KADWDEE 89

>NIPA_XENTR (Q5M8S7) NIPA-like protein (Zinc finger C3HC-type protein 1-like)|
          Length = 478

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 361 RLATFKPSTWASKPKAASSLACAQRGW 441
           R+ +F    WA KP     L CA+ GW
Sbjct: 72  RVESFSSLKWAGKPSELCPLICAKYGW 98

>D1IP_HUMAN (Q9NYX4) D1 dopamine receptor-interacting protein calcyon|
          Length = 217

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 7   PTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 117
           PT++       EP  +PSA A +E  R ++ + A PP
Sbjct: 179 PTQAGAAAAATEPPGKPSAKAEKEAARKAAGSAAPPP 215

>NIPA_XENLA (Q6P7H4) NIPA-like protein (Zinc finger C3HC-type protein 1-like)|
          Length = 477

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 361 RLATFKPSTWASKPKAASSLACAQRGW 441
           R+ +F    WA KP     L CA+ GW
Sbjct: 74  RVESFSSLKWAGKPPELCPLICAKYGW 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.125    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,064,375
Number of Sequences: 219361
Number of extensions: 820061
Number of successful extensions: 2176
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2173
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)