>VPS41_LYCES (P93231) Vacuolar assembly protein VPS41 homolog|
          Length = 960

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +2

Query: 275 RLKYQRLGGSVPXXXXXXXXXXXXXXXXXXXLGTHDGTLHILDFQGN 415
           RLKYQR+G SVP                   LGTH G +HILDF GN
Sbjct: 37  RLKYQRMGASVPSLLSADAATCIAVAERMIALGTHGGAVHILDFLGN 83

>VPS41_ARATH (P93043) Vacuolar assembly protein VPS41 homolog|
          Length = 976

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +2

Query: 275 RLKYQRLGGSVPXXXXXXXXXXXXXXXXXXXLGTHD 382
           RLKYQR+GG+VP                   LGTHD
Sbjct: 43  RLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHD 78

>VPS41_HUMAN (P49754) Vacuolar assembly protein VPS41 homolog (S53)|
          Length = 854

 Score = 32.7 bits (73), Expect = 0.35
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +2

Query: 275 RLKYQRLGGSVPXXXXXXXXXXXXXXXXXXXLGTHDGTLHILDFQGN 415
           +LKY+RL   V                    LGTH G +++LD QGN
Sbjct: 29  KLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGN 75

>KIRR2_HUMAN (Q6UWL6) Kin of IRRE-like protein 2 precursor (Kin of irregular|
           chiasm-like protein 2) (Nephrin-like protein 3)
          Length = 708

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 43  TFYGFNPHISRIPPWGRDLAAVAVISLLSPRS 138
           TFY FNPH+  +PP     A    ++   PR+
Sbjct: 638 TFYDFNPHLGMVPPCRLYRARAGYLTTPHPRA 669


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,628,083
Number of Sequences: 219361
Number of extensions: 403682
Number of successful extensions: 1207
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)