Clone Name | bastl16d10 |
---|---|
Clone Library Name | barley_pub |
>CEFE_NOCLA (Q03047) Deacetoxycephalosporin C synthetase (EC 1.14.20.1) (DAOCS)| (Expandase) Length = 314 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 Query: 229 QIQEDGK*VEYSSMISVGTSDALEPFCQLRTTW 327 QI GK +YS S+GT+D L P + W Sbjct: 89 QITNTGKYTDYSMSYSMGTADNLFPSAEFEKAW 121
>DEAF1_MOUSE (Q9Z1T5) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 566 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -1 Query: 165 KTSLGSRGRRRCLNLDGAWXXXXXRDGTAEAASPLGWTR 49 K+ LGS GR RC+ W + A AS W R Sbjct: 217 KSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKR 255
>DEAF1_RAT (O88450) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) Length = 565 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -1 Query: 165 KTSLGSRGRRRCLNLDGAWXXXXXRDGTAEAASPLGWTR 49 K+ LGS GR RC+ W + A AS W R Sbjct: 216 KSRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKR 254
>DEAF1_PANTR (O77562) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 565 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 165 KTSLGSRGRRRCLNLDGAWXXXXXRDGTAEAASPLGWTR 49 K LGS GR RC+ W + A AS W R Sbjct: 216 KNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKR 254
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/39 (35%), Positives = 16/39 (41%) Frame = -1 Query: 165 KTSLGSRGRRRCLNLDGAWXXXXXRDGTAEAASPLGWTR 49 K LGS GR RC+ W + A AS W R Sbjct: 216 KNRLGSGGRGRCIKQGENWYSPTEFEAMAGRASSKDWKR 254
>OR1M1_HUMAN (Q8NGA1) Olfactory receptor 1M1 (Olfactory receptor 19-6) (OR19-6)| Length = 313 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/30 (36%), Positives = 21/30 (70%) Frame = -2 Query: 335 TVPQVVLS*QNGSRASDVPTEIIELYSTYF 246 T+P++++S Q GS+A P +I++Y +F Sbjct: 77 TIPKMLVSLQTGSKAISYPCCLIQMYFFHF 106
>VIT_ONCMY (Q92093) Vitellogenin precursor (VTG) [Contains: Lipovitellin I| (LVI); Phosvitin (PV); Lipovitellin II (LVII)] Length = 1659 Score = 27.3 bits (59), Expect = 9.7 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 14/72 (19%) Frame = +2 Query: 134 RRRPREPSDVFLALFVNPAAHPAQAVLP-VTVFRSK-------------KMENKLNIVQ* 271 +R PR +V + LF++ A HP +L + +F +K K E + + Sbjct: 527 KREPRMVQEVAVQLFMDKALHPELRMLACIVLFETKPPMGLVITLASILKTEKNMQVAS- 585 Query: 272 FLLGHQMLLSRS 307 F H M L+RS Sbjct: 586 FTYSHMMSLTRS 597
>PG20_MYCTU (O53416) Hypothetical PE-PGRS family protein PE_PGRS20| Length = 463 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/57 (28%), Positives = 20/57 (35%) Frame = -1 Query: 228 KTVTGRTAWAGCAAGLTKRARKTSLGSRGRRRCLNLDGAWXXXXXRDGTAEAASPLG 58 +T G T G +AGL G G +G W +G A A P G Sbjct: 145 QTTAGLTGGTGGSAGLIGNGGNGGAGGAGANGGAGGNGGWLYGSGGNGGAGGAGPAG 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,669,502 Number of Sequences: 219361 Number of extensions: 533352 Number of successful extensions: 1194 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1194 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)