ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CSP_PLACB (P08672) Circumsporozoite protein precursor (CS) 33 0.31
2NGN2_HUMAN (Q9H2A3) Neurogenin 2 33 0.41
3ISPDF_LEIXX (Q6ADI0) IspD/ispF bifunctional enzyme [Includes: 2-... 32 0.53
4Y1261_METTH (O27329) Hypothetical UPF0104 protein MTH1261 32 0.91
5CLIC6_RAT (Q811Q2) Chloride intracellular channel 6 32 0.91
6JIP3_DROME (Q9GQF1) JNK-interacting protein 3 (Protein sunday dr... 31 1.2
7GLGA_FRATT (Q5NHN2) Glycogen synthase (EC 2.4.1.21) (Starch [bac... 31 1.2
8SYK_MYCGA (Q7NC34) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--t... 31 1.2
9CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor 31 1.6
10BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like... 30 2.0
11CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments) 30 2.0
12CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor 30 2.7
13FOXH1_BRARE (Q9I9E1) Forkhead box protein H1 (Forkhead activin s... 30 2.7
14CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor 30 2.7
15PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs) 30 2.7
16ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disinteg... 30 3.5
17BTBD2_HUMAN (Q9BX70) BTB/POZ domain-containing protein 2 30 3.5
18PDE3B_HUMAN (Q13370) cGMP-inhibited 3',5'-cyclic phosphodiestera... 30 3.5
19TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-d... 30 3.5
20PLIN_HUMAN (O60240) Perilipin (PERI) (Lipid droplet-associated p... 30 3.5
21PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7... 30 3.5
22CLIC6_MOUSE (Q8BHB9) Chloride intracellular channel 6 29 4.5
23MYOD_DICDI (P34109) Myosin ID heavy chain 29 4.5
24CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor 29 4.5
25CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor 29 4.5
26CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor 29 5.9
2741_DROME (Q9V8R9) Protein 4.1 homolog (Protein coracle) 29 5.9
28ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegri... 29 5.9
29TAF10_HUMAN (Q12962) Transcription initiation factor TFIID subun... 29 5.9
30SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sem... 29 5.9
31SYI_THEFY (Q47QV9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 28 7.7
32TTDN1_MOUSE (Q9D011) TTD nonphotosensitive 1 protein homolog 28 7.7
33RASL1_MOUSE (Q9Z268) RasGAP-activating-like protein 1 28 7.7
34PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-b... 28 7.7
35COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor 28 7.7
36ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Aden... 28 7.7
37SYI_ACIAD (Q6FG02) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 28 7.7
38PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-b... 28 7.7

>CSP_PLACB (P08672) Circumsporozoite protein precursor (CS)|
          Length = 378

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAGQEERGGMIPA--HAVGSPARGS*QGSKLFFSARASRGGESPKAPP 86
           AP  +G+P+  R+ GQ   GG       A G PA G  Q        + + GG      P
Sbjct: 183 APAGDGAPAGNRAGGQPAAGGNQAGGNRAGGQPAAGGNQAGGNRAGGQPAAGGNQAGGQP 242

Query: 85  APGXXXXXXXXXXXXXXEQEGG 20
           A G               Q GG
Sbjct: 243 AAGGNQAGAQAGGNQAGAQAGG 264



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>NGN2_HUMAN (Q9H2A3) Neurogenin 2|
          Length = 272

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -2

Query: 349 VLLNSANPLHSLLNSLIVQVDEQRQ*KNFEAPGYEGSPSHRR--SAGQEERGGMIPAHAV 176
           VLL SA+P  + L  L    DE+ +    E PG  G    +R   AGQ  RGG+      
Sbjct: 18  VLLGSASPALAALTPLSSSADEEEE----EEPGASGGARRQRGAEAGQGARGGVAAGAEG 73

Query: 175 GSPAR 161
             PAR
Sbjct: 74  CRPAR 78



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>ISPDF_LEIXX (Q6ADI0) IspD/ispF bifunctional enzyme [Includes:|
           2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
           (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol
           synthase) (MEP cytidylyltransferase) (MCT);
           2-C-methyl-D-erythritol 2,4-cyclod
          Length = 386

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 22/63 (34%), Positives = 26/63 (41%)
 Frame = +3

Query: 75  IPGAGGAFGDSPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS*PADLRWDGEPSYP 254
           IPG   AF  + P   R  ++ L     PR G  T      P      A LRW+GEP   
Sbjct: 205 IPGDARAFKITTPWDLRRAEELLAGLAAPRIGFGTDTHAFDPSAELWLAGLRWEGEPGLA 264

Query: 255 GAS 263
           G S
Sbjct: 265 GHS 267



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>Y1261_METTH (O27329) Hypothetical UPF0104 protein MTH1261|
          Length = 338

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 269 FSLALFVYLDYKAVQKRVQWVSAVKKHAIWAKTHERNARRVLNLMIELE 415
           F LAL+V +D  A ++   W+  V K   + K HER  RRV + + E +
Sbjct: 165 FFLALYVSVDRDAGERITGWILGVVKR-FYRKNHERLERRVRSALHEFQ 212



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>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6|
          Length = 612

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = -2

Query: 298 VQVDEQRQ*KNFEAPGYEGSPSHRRSAGQEERGGMIPAHAVGSPARGS*QGSKLFFSARA 119
           VQ  + R     E PG  G+P    +A  +  G +IP  + G   R   QG+     A+ 
Sbjct: 75  VQAQDPRPGPGTETPGTSGAPGEAEAAECDSEGALIP-QSGGGAKRQQVQGTSSGLDAQ- 132

Query: 118 SRGGESPKAP 89
              GE+P+ P
Sbjct: 133 ---GEAPEVP 139



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>JIP3_DROME (Q9GQF1) JNK-interacting protein 3 (Protein sunday driver)|
          Length = 1227

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAGQEERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKAPPAP 80
           A G  G P  R +      GG  PAH+ GSP+RGS  G     +  A   G+ P  P + 
Sbjct: 524 ADGLGGGPMFRHT------GGGSPAHSHGSPSRGSGGGD----NRLALTSGQPPVHPASA 573

Query: 79  G 77
           G
Sbjct: 574 G 574



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>GLGA_FRATT (Q5NHN2) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase)
          Length = 489

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 49  WLFSRARAGSPAPGGPSAIHPHDWRGQRRKAYCPARSLEQG 171
           W+ +R   G  A   P  +H HDW      AY  A  L  G
Sbjct: 119 WVAARISEGLDAKWKPEIVHSHDWHAGLVPAYIKASELASG 159



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>SYK_MYCGA (Q7NC34) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 496

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 293 LDYKAVQKRVQWVSAVKKHAIWAKTHERNARRVLNLMIE 409
           +D+  V+K  Q +   KKH +  K HE+    ++NL  E
Sbjct: 331 IDFTQVKKIDQALDLAKKHKVHVKEHEKTIGHIINLFFE 369



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>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAG----QEERGGMIPAHAVGSPARGS*QGSKLFF------SARASRG 110
           APG +G P  R +AG    + +RG   P  A GSP +   +G            A   +G
Sbjct: 712 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDKG 771

Query: 109 GESPKAPPAP 80
              P  PP P
Sbjct: 772 EAGPSGPPGP 781



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>BRD1_HUMAN (O95696) Bromodomain-containing protein 1 (BR140-like protein)|
          Length = 1058

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
 Frame = +3

Query: 105 SPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS*PADLRWDGEPSYPGASKFFHWRC 284
           S  ++ +  KK+     EP A LPT CA  IPP+      L            K F  R 
Sbjct: 422 STSKVRKKAKKAKKALAEPCAVLPTVCAPYIPPQR-----LNRIANQVAIQRKKQFVERA 476

Query: 285 SSTWTI-RLFRRECSGLALLRSTLYGQR 365
            S W + RL R     L  L+S+L  QR
Sbjct: 477 HSYWLLKRLSRNGAPLLRRLQSSLQSQR 504



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>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAGQE-ERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKAPPA 83
           APG EGSP    S G + +RG   PA A G P      G          RG   P  P  
Sbjct: 579 APGAEGSPGRDGSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETGPAGPIG 638

Query: 82  P 80
           P
Sbjct: 639 P 639



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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -2

Query: 259  APGYEGSPSHRRSAGQE-ERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKAPPA 83
            APG EG+P    +AG + +RG   PA   G+P      G          RG   P  P  
Sbjct: 1006 APGAEGAPGRDGAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065

Query: 82   P 80
            P
Sbjct: 1066 P 1066



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>FOXH1_BRARE (Q9I9E1) Forkhead box protein H1 (Forkhead activin signal|
           transducer 1) (Fast-1) (Schmalspur protein)
          Length = 472

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +3

Query: 93  AFGDSPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS*PADLRWDGEPSYP 254
           A+ DS P   ++ K+   P  E    LPT+ A   PP +  P  +R++G P  P
Sbjct: 335 AYSDSCPPPNKSSKRGNTPPWE----LPTSYAKYTPPNAVAPPSMRFNGNPFMP 384



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>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
 Frame = -2

Query: 259  APGYEGSPSHRRSAGQE-ERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKAPPA 83
            APG EGSP    S G + +RG   PA   G+P      G          RG   P  P  
Sbjct: 1017 APGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076

Query: 82   P 80
            P
Sbjct: 1077 P 1077



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAG----QEERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKA 92
           APG +G P  R +AG    + +RG   P  A GSP +               RG   P  
Sbjct: 723 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKD------------GVRGLTGPIG 770

Query: 91  PPAP 80
           PP P
Sbjct: 771 PPGP 774



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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = +1

Query: 76  SPAPGGPSAIHPHDWRGQRRKA---YCPARSLEQGCPRRVPESSLLAPPDQLTSDGMGNP 246
           SP  GGP+  +P   +G          P  SL  G P   P  S L PP   +  G GNP
Sbjct: 262 SPMGGGPNGPNPRAMQGSPMGGPGQNSPMNSLPMGSPMGNPIGSPLGPP---SGPGPGNP 318



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>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (AD56)
          Length = 864

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +3

Query: 171 LPTACAGIIPPRSS*PADLRW-DGEPSYPGASKFFHWRCSSTWTIRLFRRECSGL 332
           LP  C G     S  P+D+R  DGEP   G +   H RC+S      + R+C  L
Sbjct: 490 LPEFCPG---DSSQCPSDIRLGDGEPCASGEAVCMHGRCAS------YARQCQSL 535



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>BTBD2_HUMAN (Q9BX70) BTB/POZ domain-containing protein 2|
          Length = 525

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 187 AHAVGSPARGS*QGSKLFFSARASRGGESPKAPPAPG 77
           A+A  +PA G+   +    +A A+  G +P APP PG
Sbjct: 30  ANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPPGPG 66



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>PDE3B_HUMAN (Q13370) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1) (CGIP1)
          Length = 1112

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 27  SCSLFFLLAILSRTRRIPGAGGAFG 101
           +C+ FFL   L+RT+R PG G + G
Sbjct: 126 ACAFFFLTCFLTRTKRGPGPGRSCG 150



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>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +3

Query: 63   RTRRIPGAGGAFGD---SPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS*PADLRW 233
            R+ R+P +  A  +   SP   + + ++S  P  + R G+P       PPR   PA  + 
Sbjct: 1231 RSPRLPASTSAARNASASPRSQSLSRRESPSPSHQARPGVP-------PPRGVPPARAQP 1283

Query: 234  DGEPSYPGASK 266
            DG PS PG SK
Sbjct: 1284 DGTPS-PGGSK 1293



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>PLIN_HUMAN (O60240) Perilipin (PERI) (Lipid droplet-associated protein)|
          Length = 522

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 181 AVGSPARGS*QGSKLFFSARASRGGESPKAPPAPG 77
           A G+P+ G     +L    R+ R  +SP APP PG
Sbjct: 435 ASGAPSAGPEPAPRLAQPRRSLRSAQSPGAPPGPG 469



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>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)|
          Length = 543

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 16/82 (19%)
 Frame = +1

Query: 73  GSPAPGGPSAIHPHDWRGQRRKAYCPARSLE-------QGCPRRVPESSLLAPPDQ---- 219
           G+P  GGP    PH W+ Q R A       +       Q   RR P+  +  PP Q    
Sbjct: 362 GAPGQGGPE--DPHPWQNQLRAARDRNEQTQVQYLDPNQDPLRRRPQRQVSRPPQQPRQA 419

Query: 220 -----LTSDGMGNPHIQAPQSF 270
                    G G P  Q PQ +
Sbjct: 420 PQGPPPQQPGYGYPQQQQPQRY 441



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>CLIC6_MOUSE (Q8BHB9) Chloride intracellular channel 6|
          Length = 596

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 26/96 (27%), Positives = 36/96 (37%)
 Frame = -2

Query: 295 QVDEQRQ*KNFEAPGYEGSPSHRRSAGQEERGGMIPAHAVGSPARGS*QGSKLFFSARAS 116
           Q  + R     E PG  G+P    +A ++  G  IP  A  +P+    QG     S   S
Sbjct: 76  QAQDPRTGPEAETPGASGAPGEAEAAERDPEGA-IPQGAEEAPSAQQVQGMS---SGLDS 131

Query: 115 RGGESPKAPPAPGXXXXXXXXXXXXXXEQEGGLGQE 8
           +G    +AP  PG               +E   GQE
Sbjct: 132 QG----EAPEVPGDSRREPEDPTASEAGEEAESGQE 163



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>MYOD_DICDI (P34109) Myosin ID heavy chain|
          Length = 1109

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -2

Query: 253  GYEGSPSHRRSAGQEERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKAPPAP 80
            G   +PS R +A    RGGM P    GS A  S +G        A RGG +P+   AP
Sbjct: 1052 GPSTAPSGRGAAPPSSRGGMAPRG--GSVAPPSSRGGIAPRGGIAPRGGMAPRGGMAP 1107



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>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAG----QEERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKA 92
           APG +G P  R +AG    + +RG   P  A GSP +               RG   P  
Sbjct: 712 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKD------------GVRGLTGPIG 759

Query: 91  PPAP 80
           PP P
Sbjct: 760 PPGP 763



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>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAG----QEERGGMIPAHAVGSPARGS*QGSKLFFSARASRGGESPKA 92
           APG +G P  R +AG    + +RG   P  A GSP +               RG   P  
Sbjct: 719 APGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKD------------GVRGLTGPIG 766

Query: 91  PPAP 80
           PP P
Sbjct: 767 PPGP 770



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>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor|
          Length = 1712

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = +1

Query: 1   RKTPAPNRLPAL----SFFFWLF-SRARAGSPA-PGGPSAIHPHDWRGQRRKAYC 147
           R  P P  LP       F F L  ++ RAG P  PG P A  P  W+G   +  C
Sbjct: 431 RGPPGPPGLPGPPGPDGFLFGLKGAKGRAGFPGLPGSPGARGPKGWKGDAGECRC 485



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>41_DROME (Q9V8R9) Protein 4.1 homolog (Protein coracle)|
          Length = 1698

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +3

Query: 54  ILSRTRRIPGAGGAFGDSPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS*PADL-- 227
           +LS T R    G A   +   L+ ++K+S  P   P+ G  +   G   P S   AD   
Sbjct: 657 LLSPTTRAKLQGSAVDAAAVPLSDSQKRSYSPTKGPQ-GYSSGAPGSYKPISDPTADFLE 715

Query: 228 --RWDGEPSYPGASK 266
             R++ EP Y G SK
Sbjct: 716 SQRYNKEPGYVGPSK 730



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>ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (CRII-7)
          Length = 816

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 171 LPTACAGIIPPRSS*PADLRW-DGEPSYPGASKFFHWRCSSTWTIRLFRRECSGL 332
           LP  C G     S  P D+R  DGEP   G +   H RC+S      + R+C  L
Sbjct: 491 LPEFCLG---DSSQCPPDIRLGDGEPCASGEAVCMHGRCAS------YTRQCQSL 536



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>TAF10_HUMAN (Q12962) Transcription initiation factor TFIID subunit 10|
           (Transcription initiation factor TFIID 30 kDa subunit)
           (TAF(II)30) (TAFII-30) (TAFII30) (STAF28)
          Length = 218

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 78  PGAGGAFGDSPPRLARAEKKSLLPC*EPRAGLPTACAGIIPPRSS 212
           PGAG A G + P  ARA + +     E R   P +  G  PP  +
Sbjct: 52  PGAGAAAGGTGPLAARAGEPA-----ERRGAAPVSAGGAAPPEGA 91



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>SEM6C_HUMAN (Q9H3T2) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 930

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 19/84 (22%)
 Frame = +1

Query: 52   LFSRARAGSPAP---GGPSAIHPHDWRG--------QRRKAYCPARS--------LEQGC 174
            L SRA    PAP   GGPS   PH+           + R A  PAR         L  G 
Sbjct: 790  LTSRALPPEPAPALLGGPSP-RPHECASPLRLDVPPEGRCASAPARPALSAPAPRLGVGG 848

Query: 175  PRRVPESSLLAPPDQLTSDGMGNP 246
             RR+P S   APP  LT    G P
Sbjct: 849  GRRLPFSGHRAPPALLTRVPSGGP 872



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>SYI_THEFY (Q47QV9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1060

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/39 (46%), Positives = 19/39 (48%)
 Frame = -1

Query: 212 GGARRDDSGTRRGQPCSRLLAGQ*AFLLCPRQSWG*IAE 96
           G A R DSG R  QP +R L G   F   P Q    IAE
Sbjct: 829 GRAARVDSGQRVRQPLARALVGAPGFAELPEQLRAQIAE 867



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>TTDN1_MOUSE (Q9D011) TTD nonphotosensitive 1 protein homolog|
          Length = 178

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +1

Query: 55  FSRARAGSPAPGG-PSAIHPHDWRGQRRKAYCPA--RSLEQGCPR 180
           FS AR GSP+PGG P +        Q +  Y P   ++  QG PR
Sbjct: 72  FSGARFGSPSPGGYPGSYSRSPAGSQHQFGYSPGQQQTYPQGSPR 116



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>RASL1_MOUSE (Q9Z268) RasGAP-activating-like protein 1|
          Length = 799

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +1

Query: 49  WLFSRARAGSPAPGGPSAIHPHDWRGQRRKAYCPARSLEQGCPR 180
           WL +  +A +P PG   A HP  +R  R      A     GC R
Sbjct: 663 WLSALRKASAPNPGKLVACHPGAFRSGRWTCCLQAERSAAGCSR 706



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>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144)
          Length = 344

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 4   KTPAPNRLPALSFFFWLFSRARAGSPAPGGPSAIHP 111
           K P+P  LPA S      +    GSP+  GP A HP
Sbjct: 262 KAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHP 297



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>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
 Frame = -2

Query: 253  GYEGSPSHRRSAGQEERGGMI-------PAHAVGSPARGS*QGSKLFFSARASRGGESPK 95
            G +G+P  +   G   R G+        PA   GSP     +G       + S+GG+   
Sbjct: 1087 GEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGGKGEN 1146

Query: 94   APPAP 80
             PP P
Sbjct: 1147 GPPGP 1151



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>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1264

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 259 APGYEGSPSHRRSAGQEERGGMIPAHAVGSPARGS 155
           AP   G P HR + G+ +       HA G  ARGS
Sbjct: 19  APASRGGPEHRSAWGEADSRANGYPHAPGGSARGS 53



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>SYI_ACIAD (Q6FG02) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 945

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = -2

Query: 400 QVENTTSIALVRLCPYSVLLNSANPLHSLLNSLIVQVDEQRQ*KNF 263
           +V++ T I +    P+++  N A  LH+ ++  +VQV   R  +NF
Sbjct: 238 EVQDPTDIVIWTTTPWTLPANQAVALHAEIDYQLVQVQSDRGTQNF 283



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>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144) (Zfp-144)
          Length = 342

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 4   KTPAPNRLPALSFFFWLFSRARAGSPAPGGPSAIHP 111
           K P+P  LPA S      +    GSP+  GP A HP
Sbjct: 262 KAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHP 297


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,290,656
Number of Sequences: 219361
Number of extensions: 1588663
Number of successful extensions: 5098
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5096
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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