ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl16c01 |
|---|---|
| Clone Library Name | barley_pub |
>MA2B1_CAVPO (Q8VHC8) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1007 Score = 148 bits (374), Expect = 5e-36 Identities = 70/124 (56%), Positives = 87/124 (70%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T G+LNV LV H+HDDVGWLKTVDQYY G +N +Q A V LDSV+ AL + Sbjct: 50 YETCPMVQPGMLNVHLVAHTHDDVGWLKTVDQYYWGIHNDLQQAGVQYILDSVISALLAE 109 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+FV E AFF RWW +++ + Q +V +LV G+LEF NGGW M+DEAATHY ++DQ Sbjct: 110 PTRRFVYVEMAFFSRWWHQQTNETQEVVRRLVRQGRLEFANGGWVMNDEAATHYGAIVDQ 169 Query: 441 TTLG 452 TLG Sbjct: 170 MTLG 173
>MA2B1_MOUSE (O09159) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1013 Score = 148 bits (373), Expect = 7e-36 Identities = 69/124 (55%), Positives = 85/124 (68%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T T G+LNV L+PH+HDDVGWLKTVDQYY G + +Q A V LDSVV +L Sbjct: 52 YKTCPPTKPGMLNVHLLPHTHDDVGWLKTVDQYYYGILSDVQHASVQYILDSVVSSLLEK 111 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+F+ E AFF RWW +++ Q V LV G+LEF+NGGW M+DEAATHY ++DQ Sbjct: 112 PTRRFIYVEMAFFSRWWKQQTSATQDAVRNLVRQGRLEFVNGGWVMNDEAATHYGAIVDQ 171 Query: 441 TTLG 452 TLG Sbjct: 172 MTLG 175
>MA2B1_MACFA (Q60HE9) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1012 Score = 146 bits (369), Expect = 2e-35 Identities = 69/124 (55%), Positives = 85/124 (68%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T +LNV LVPH+HDDVGWLKTVDQY+ G N IQ A V LDSV+ AL D Sbjct: 53 YETCPTVQPNILNVHLVPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISALLAD 112 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+F+ E AFF RWW +++ ++ +V LV G+LEF NGGW M+DEAATHY ++DQ Sbjct: 113 PTRRFIYVEIAFFSRWWHQQTNAMREVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQ 172 Query: 441 TTLG 452 TLG Sbjct: 173 MTLG 176
>MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 1010 Score = 146 bits (368), Expect = 3e-35 Identities = 69/124 (55%), Positives = 84/124 (67%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T +LNV L+PH+HDDVGWLKTVDQY+ G N IQ A V LDSV+ AL D Sbjct: 51 YETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISALLAD 110 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+F+ E AFF RWW +++ Q +V LV G+LEF NGGW M+DEAATHY ++DQ Sbjct: 111 PTRRFIYVEIAFFSRWWHQQTNATQEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQ 170 Query: 441 TTLG 452 TLG Sbjct: 171 MTLG 174
>MANA_DICDI (P34098) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Alpha-D-mannoside mannohydrolase) (Laman) [Contains: Alpha-mannosidase 60 kDa subunit; Alpha-mannosidase 58 kDa subunit] Length = 1005 Score = 142 bits (357), Expect = 5e-34 Identities = 69/114 (60%), Positives = 82/114 (71%) Frame = +3 Query: 111 LLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQ 290 LLNV +V H+HDDVGWLKTVD+YY GSN SI A V TLD+ + L +P RKF+ E Sbjct: 41 LLNVHIVAHTHDDVGWLKTVDEYYYGSNMSIAFAGVQYTLDTAITCLLANPERKFIYVEI 100 Query: 291 AFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 AFFQRWW E+S +Q IV LV +EFINGG+CM+DEA T+Y D IDQ TLG Sbjct: 101 AFFQRWWDEQSTTMQNIVKGLVGKWSIEFINGGYCMNDEATTYYDDTIDQMTLG 154
>MA2B1_BOVIN (Q29451) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 999 Score = 141 bits (355), Expect = 9e-34 Identities = 68/123 (55%), Positives = 84/123 (68%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T +LNV LVPH+HDDVGWLKTVDQY+ G N+IQ A V LDSV+ +L + Sbjct: 53 YKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLAN 112 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+F+ E AFF RWW +++ Q IV +LV G+LEF NGGW M+DEA THY +IDQ Sbjct: 113 PTRRFIYVEIAFFSRWWRQQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQ 172 Query: 441 TTL 449 TL Sbjct: 173 MTL 175
>MA2B1_FELCA (O46432) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) Length = 1007 Score = 140 bits (352), Expect = 2e-33 Identities = 67/124 (54%), Positives = 84/124 (67%) Frame = +3 Query: 81 YNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARD 260 Y T +LNV LV H+HDDVGWLKTVDQY+ G +N +Q A V LDSV+ +L + Sbjct: 53 YETCPMVHPDMLNVHLVAHTHDDVGWLKTVDQYFYGIHNDVQHAGVQYILDSVISSLLVE 112 Query: 261 PGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQ 440 P R+F+ E AFF RWW +++ Q +V LV G+LEF NGGW M+DEAATHY +IDQ Sbjct: 113 PTRRFIYVEIAFFSRWWHQQTNATQEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIIDQ 172 Query: 441 TTLG 452 TLG Sbjct: 173 MTLG 176
>MA2A2_HUMAN (P49641) Alpha-mannosidase IIx (EC 3.2.1.114)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN IIx) (Mannosidase alpha class 2A member 2) Length = 1139 Score = 101 bits (252), Expect = 8e-22 Identities = 51/113 (45%), Positives = 68/113 (60%) Frame = +3 Query: 114 LNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQA 293 L V +VPHSH+D GW+KT D+YY I L+S+V L DP R+F+ AE + Sbjct: 166 LQVFVVPHSHNDPGWIKTFDKYYTEQTQHI--------LNSMVSKLQEDPRRRFLWAEVS 217 Query: 294 FFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 FF +WW + + +A V +LV +GQLE GGW M DEA +HY +IDQ G Sbjct: 218 FFAKWWDNINVQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALIDQLIEG 270
>MA2B2_PONPY (Q5RDJ3) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 88.6 bits (218), Expect = 7e-18 Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 1/118 (0%) Frame = +3 Query: 102 AAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVV 281 +AG + +VPHSH DVGW+ TV + S+Q A + SVV+ LAR R+F+ Sbjct: 23 SAGPIRAFVVPHSHMDVGWVYTVQE-------SMQ-AYAANVYTSVVEELARGQQRRFIA 74 Query: 282 AEQAFFQRWWVE-KSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 EQ FF+ WW S + + VH+L++ G+LEF+ GG MHDEA TH D I Q T G Sbjct: 75 VEQEFFRLWWGGVASDQQKHQVHQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEG 132
>MA2A1_RAT (P28494) Alpha-mannosidase 2 (EC 3.2.1.114) (Alpha-mannosidase II)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1) (Fragment) Length = 489 Score = 88.2 bits (217), Expect = 9e-18 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 1/114 (0%) Frame = +3 Query: 114 LNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQA 293 L V +VPHSH+D GWLKT + Y+ I +++V L D RKF+ +E + Sbjct: 132 LQVFVVPHSHNDPGWLKTFNDYFRDKTQYI--------FNNMVLKLKEDSSRKFIWSEIS 183 Query: 294 FFQRWW-VEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 + +WW + +PK +A V L+ +GQLE + GGW M DEA THY +IDQ G Sbjct: 184 YLAKWWDIIDNPKKEA-VKSLLQNGQLEIVTGGWVMADEATTHYFALIDQLIEG 236
>MA2B2_PIG (Q28949) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) (AMAN) Length = 995 Score = 85.5 bits (210), Expect = 6e-17 Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +3 Query: 114 LNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQA 293 + V +VPHSH DVGWL TV + S+Q V D +SVV+AL R R+F+ EQ Sbjct: 27 VKVFVVPHSHMDVGWLHTVQE-------SMQ-VYVPDVYNSVVEALTRGKRRRFIAVEQE 78 Query: 294 FFQRWWVE-KSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 +F+ WW S K + V +L+ +LEF+ GG MHDEA TH+ D I Q T G Sbjct: 79 YFRLWWDGFASAKRKQQVRQLLAEQRLEFVLGGQVMHDEAVTHFDDQILQLTEG 132
>MA2B2_HUMAN (Q9Y2E5) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1009 Score = 84.7 bits (208), Expect = 1e-16 Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = +3 Query: 102 AAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVV 281 +AG + +VPHSH DVGW+ TV + A + SVV+ LAR R+F+ Sbjct: 23 SAGPIRAFVVPHSHMDVGWVYTVQES--------MRAYAANVYTSVVEELARGQQRRFIA 74 Query: 282 AEQAFFQRWWVEKSPKIQAI-VHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 EQ FF+ WW + Q V +L++ G+LEF+ GG MHDEA TH D I Q T G Sbjct: 75 VEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEG 132
>MA2A1_HUMAN (Q16706) Alpha-mannosidase 2 (EC 3.2.1.114) (Alpha-mannosidase II)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1) Length = 1144 Score = 84.3 bits (207), Expect = 1e-16 Identities = 43/113 (38%), Positives = 62/113 (54%) Frame = +3 Query: 114 LNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQA 293 L V +VPHSH+D GWLKT + Y+ I +++V L D RKF+ +E + Sbjct: 166 LQVFVVPHSHNDPGWLKTFNDYFRDKTQYI--------FNNMVLKLKEDSRRKFIWSEIS 217 Query: 294 FFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 + +WW + + V L+++GQLE + GGW M DEA HY +IDQ G Sbjct: 218 YLSKWWDIIDIQKKDAVKSLIENGQLEIVTGGWVMPDEATPHYFALIDQLIEG 270
>MA2A1_MOUSE (P27046) Alpha-mannosidase 2 (EC 3.2.1.114) (Alpha-mannosidase II)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (Mannosidase alpha class 2A member 1) (AMAN II) Length = 1150 Score = 84.0 bits (206), Expect = 2e-16 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Frame = +3 Query: 114 LNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRKFVVAEQA 293 L V +VPHSH+D GWLKT + Y+ I +++V L D RKF+ +E + Sbjct: 165 LQVFVVPHSHNDPGWLKTFNDYFRDKTQYI--------FNNMVLKLKEDSSRKFMWSEIS 216 Query: 294 FFQRWW-VEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTLG 452 + +WW + PK +A V L+ +GQLE + GGW M DEA HY +IDQ G Sbjct: 217 YLAKWWDIIDIPKKEA-VKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEG 269
>MA2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1018 Score = 79.0 bits (193), Expect = 5e-15 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 1/121 (0%) Frame = +3 Query: 93 AGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALARDPGRK 272 A AG + +VPHSH DVGW+ TV + A + +VV L R R+ Sbjct: 20 AAQPAGPIRAFVVPHSHMDVGWVFTVQES--------MRAYAANVYTTVVAELVRGGQRR 71 Query: 273 FVVAEQAFFQRWWVEKSPKIQAI-VHKLVDSGQLEFINGGWCMHDEAATHYIDMIDQTTL 449 F+ EQ FF+ WW + + Q V +L+ G+LEF+ GG MHDEA TH D I Q T Sbjct: 72 FIAVEQEFFRLWWDGVASEQQKQQVRQLLHEGRLEFVLGGQVMHDEAVTHLDDQILQLTE 131 Query: 450 G 452 G Sbjct: 132 G 132
>MAN2_DROME (Q24451) Alpha-mannosidase 2 (EC 3.2.1.114) (Alpha-mannosidase II)| (Mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase) (MAN II) (Golgi alpha-mannosidase II) (AMAN II) Length = 1108 Score = 77.4 bits (189), Expect = 2e-14 Identities = 42/126 (33%), Positives = 69/126 (54%) Frame = +3 Query: 75 VAYNTSAGTAAGLLNVRLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVMDTLDSVVDALA 254 + Y+ A L V +VPHSH+D GW++T ++YY I L + + L Sbjct: 131 IKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQHDTKHI--------LSNALRHLH 182 Query: 255 RDPGRKFVVAEQAFFQRWWVEKSPKIQAIVHKLVDSGQLEFINGGWCMHDEAATHYIDMI 434 +P KF+ AE ++F R++ + + + +V +GQLEF+ GGW M DEA +H+ +++ Sbjct: 183 DNPEMKFIWAEISYFARFYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVL 242 Query: 435 DQTTLG 452 Q T G Sbjct: 243 LQLTEG 248
>TMC8_HUMAN (Q8IU68) Transmembrane channel-like protein 8 (Epidermodysplasia| verruciformis protein 2) Length = 726 Score = 31.6 bits (70), Expect = 0.97 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -1 Query: 166 VLSQPTSSWECGTRRTFSSP-AAVPALVLYATYPCASLLARFLGASVRNGPL 14 V+S SSW+CG +S+P VP LV P +LG+ + PL Sbjct: 552 VVSSIHSSWDCGLFTNYSAPWQVVPELVALGLPPIGQRALHYLGSHAFSFPL 603
>DPOL_ADE40 (P48311) DNA polymerase (EC 2.7.7.7)| Length = 1188 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 15 SGPFRTEAPRKRARREAHGYVAYNTSAGTAAGLLNVRLVPHS 140 + P T APR+RA + G T++G NV L P+S Sbjct: 35 AAPTATRAPRRRAATASPGEPPSTTASGRPPAANNVSLTPNS 76
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 28.5 bits (62), Expect = 8.2 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%) Frame = -1 Query: 376 NSS*PESTSLCTM-AWIFGLFSTHHLWKKACSATTNLRP------------GSLASASTT 236 N+S S+SL + A L S+ L + ++TT+ P SLAS+STT Sbjct: 66 NTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTT 125 Query: 235 ESSVSITHAPWMELLEPT*YWSTVLSQPTSSWECGTRRTFSSPAAVP 95 SS++ + L + S++ S T+S + T S+ +A P Sbjct: 126 SSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATP 172
>XYLT_DROME (Q7KVA1) Xylosyltransferase oxt (EC 2.4.2.26) (Peptide| O-xylosyltransferase) (Imaginal disk type I) Length = 876 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 4/37 (10%) Frame = +3 Query: 225 TLDSVVDALARDPGRKFVVAE----QAFFQRWWVEKS 323 TLD +VD L+ +PGR FV Q F Q+ ++K+ Sbjct: 352 TLDKLVDFLSANPGRNFVKGHGRETQKFIQKQGLDKT 388 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,847,394 Number of Sequences: 219361 Number of extensions: 884076 Number of successful extensions: 2924 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2802 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2887 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
