ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl16b12 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 131 bits (330), Expect = 8e-31 Identities = 53/87 (60%), Positives = 75/87 (86%) Frame = +2 Query: 212 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHET 391 + V+YDH++++++G+R++LIS SIHYPRS P MWP L+ +AKEGG D I+TYVFWNGHE Sbjct: 22 ASVSYDHKAIIVNGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHEP 81 Query: 392 APGKYYFEDRFDLVQFARVVKDAGLFL 472 GKYYFE+R+DLV+F +VV++AGL++ Sbjct: 82 EEGKYYFEERYDLVKFIKVVQEAGLYV 108
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 131 bits (330), Expect = 8e-31 Identities = 55/86 (63%), Positives = 73/86 (84%) Frame = +2 Query: 212 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHET 391 + VTYDH+S++I+G+RR+LIS SIHYPRS P MWP L+ +AK+GG D I+TYVFWNGHE Sbjct: 25 ASVTYDHKSVIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 84 Query: 392 APGKYYFEDRFDLVQFARVVKDAGLF 469 +PG+YYF R+DLV+F ++VK AGL+ Sbjct: 85 SPGQYYFGGRYDLVRFLKLVKQAGLY 110
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 129 bits (325), Expect = 3e-30 Identities = 52/87 (59%), Positives = 74/87 (85%) Frame = +2 Query: 212 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHET 391 + V+YDH++++I+G++R+LIS SIHYPRS P MWP L+ +AK+GG D I+TYVFWNGHE Sbjct: 24 ASVSYDHKAIIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEP 83 Query: 392 APGKYYFEDRFDLVQFARVVKDAGLFL 472 +PG YYFE+R+DLV+F ++V+ GLF+ Sbjct: 84 SPGNYYFEERYDLVKFIKLVQQEGLFV 110
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 115 bits (287), Expect = 7e-26 Identities = 48/85 (56%), Positives = 67/85 (78%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 V YD+R++ I+ +RR+L+S SIHYPRS P MWP ++ +AK+ D I+TYVFWNGHE + Sbjct: 31 VWYDYRAIKINDQRRILLSGSIHYPRSTPEMWPDIIEKAKDSQLDVIQTYVFWNGHEPSE 90 Query: 398 GKYYFEDRFDLVQFARVVKDAGLFL 472 GKYYFE R+DLV+F +++ AGLF+ Sbjct: 91 GKYYFEGRYDLVKFIKLIHQAGLFV 115
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 103 bits (258), Expect = 2e-22 Identities = 44/84 (52%), Positives = 62/84 (73%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 V++D R++ I G+RR+L+S SIHYPRS MWP L+++AK+GG D IETYVFWN HE + Sbjct: 27 VSHDERAITIDGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIETYVFWNAHEPSR 86 Query: 398 GKYYFEDRFDLVQFARVVKDAGLF 469 +Y F DLV+F + ++ AGL+ Sbjct: 87 RQYDFSGNLDLVRFIKTIQSAGLY 110
>BGAL_CANFA (Q9TRY9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 668 Score = 59.7 bits (143), Expect = 4e-09 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 + Y H + G+ IS SIHY R W + + K G + I+TYV WN HE P Sbjct: 35 IDYSHNRFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPQP 94 Query: 398 GKYYFEDRFDLVQFARVVKDAGLFL 472 G+Y F D+ F ++ + GL + Sbjct: 95 GQYQFSGEQDVEYFIKLAHELGLLV 119
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 59.3 bits (142), Expect = 5e-09 Identities = 30/85 (35%), Positives = 43/85 (50%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 + Y S + G+ IS SIHY R W + + K G + I+TYV WN HE P Sbjct: 34 IDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWP 93 Query: 398 GKYYFEDRFDLVQFARVVKDAGLFL 472 G+Y F + D+ F R+ + GL + Sbjct: 94 GQYQFSEDHDVEYFLRLAHELGLLV 118
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 58.9 bits (141), Expect = 6e-09 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 + Y H + G+ IS SIHY R W + + K G + I+TYV WN HE P Sbjct: 35 IDYGHNRFLKDGQPFRYISGSIHYFRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPQP 94 Query: 398 GKYYFEDRFDLVQFARVVKDAGLFL 472 G+Y F D+ F ++ + GL + Sbjct: 95 GQYQFSGEHDVEYFLKLAHELGLLV 119
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/85 (34%), Positives = 42/85 (49%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAP 397 + Y + G+ IS SIHY R W + + K G + I+TYV WN HE P Sbjct: 34 IAYSQDRFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNTIQTYVPWNFHEPWP 93 Query: 398 GKYYFEDRFDLVQFARVVKDAGLFL 472 G+Y F + D+ F R+ + GL + Sbjct: 94 GQYQFSEDHDVEYFLRLAHELGLLV 118
>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 647 Score = 50.4 bits (119), Expect = 2e-06 Identities = 27/83 (32%), Positives = 39/83 (46%) Frame = +2 Query: 224 YDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAPGK 403 Y + G+ IS SIHY R W + + K G + I+ YV WN HE PG+ Sbjct: 37 YSRDRFLKDGQPFRYISGSIHYFRIPRFYWEDRLLKMKMAGLNAIQMYVPWNFHEPQPGQ 96 Query: 404 YYFEDRFDLVQFARVVKDAGLFL 472 Y F D+ F ++ + GL + Sbjct: 97 YEFSGDRDVEHFIQLAHELGLLV 119
>BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| (Tilactase) (Lactase-N) Length = 1006 Score = 49.7 bits (117), Expect = 4e-06 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%) Frame = +2 Query: 218 VTYDHRSLVISGRRRLLISASIH-YPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETA 394 VT+D +SL I+G R ++ S H + V + + + K G +C+ YV W E Sbjct: 46 VTWDDKSLFINGERIMIFSGEFHPFRLPVKELQLDIFQKVKALGFNCVSFYVDWALVEGK 105 Query: 395 PGKYYFEDRFDLVQFARVVKDAGLFL 472 PG+Y + FDL F +AG++L Sbjct: 106 PGEYRADGIFDLEPFFDAASEAGIYL 131
>BGAL_XANMN (P48982) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 598 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/75 (33%), Positives = 38/75 (50%) Frame = +2 Query: 242 VISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAPGKYYFEDR 421 V G+ L+S +IH+ R A W + +A+ G + +ETYVFWN E G++ F Sbjct: 38 VRDGKPYQLLSGAIHFQRIPRAYWKDRLQKARALGLNTVETYVFWNLVEPQQGQFDFSGN 97 Query: 422 FDLVQFARVVKDAGL 466 D+ F + GL Sbjct: 98 NDVAAFVKEAAAQGL 112
>7LESS_DROME (P13368) Protein sevenless (EC 2.7.10.1)| Length = 2554 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Frame = +2 Query: 245 ISGRRRLL-----ISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHETAPGKYY 409 I G +RLL + H P S PA ++ AE D I+ V+W + + Sbjct: 1438 IEGEQRLLWVNEHVELLTHVPGSAPAKLARMRAEVLALAVDWIQRIVYWAELDATAPQAA 1497 Query: 410 FEDRFDLVQF 439 R DL F Sbjct: 1498 IIYRLDLCNF 1507 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,941,633 Number of Sequences: 219361 Number of extensions: 316109 Number of successful extensions: 1042 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1042 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
