ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468232.1| Oryza sativa (japonica cultivar-group), mRNA 381 e-102
2dbj|AK072317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 373 e-100
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 289 3e-75
4dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic D... 289 3e-75
5dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic D... 289 3e-75
6ref|NM_204433.1| Gallus gallus cyclin-dependent kinase inhibitor... 46 0.081
7ref|NM_204434.1| Gallus gallus ARF tumor suppressor (LOC395077),... 46 0.081
8gb|AY138247.1| Gallus gallus p15INK4b tumor suppressor mRNA, com... 46 0.081
9gb|AY138246.1| Gallus gallus p15INK4b tumor suppressor and ARF t... 46 0.081
10gb|AY138245.1| Gallus gallus ARF tumor suppressor mRNA, complete... 46 0.081
11ref|XM_531991.2| PREDICTED: Canis familiaris similar to bile aci... 44 0.32
12gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 44 0.32
13ref|XM_231705.3| PREDICTED: Rattus norvegicus similar to Ezh2 pr... 44 0.32
14gb|DQ399904.1| Nocardiopsis sp. 90127 plasmid pSQ10, complete se... 42 1.3
15gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.3
16ref|XM_479829.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
17ref|XM_507104.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.0
18ref|NM_189939.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
19ref|XM_526073.1| PREDICTED: Pan troglodytes similar to SOCS box ... 40 5.0
20ref|NM_185176.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.0
21gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.0
22gb|AY022960.1| Oryza sativa microsatellite MRG5285 containing (C... 40 5.0
23ref|XM_868407.1| PREDICTED: Bos taurus similar to SWI/SNF-relate... 40 5.0
24gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, co... 40 5.0
25gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.0
26gb|AF370429.1| Homo sapiens PP7706 mRNA, complete cds 40 5.0
27ref|XM_750818.1| Aspergillus fumigatus Af293 poly(A)+RNA transpo... 40 5.0
28emb|AJ699059.1| Hordeum vulgare mRNA for putative translation in... 40 5.0
29gb|BC021585.1| Homo sapiens high-mobility group 20B, mRNA (cDNA ... 40 5.0
30gb|BC002552.2| Homo sapiens high-mobility group 20B, mRNA (cDNA ... 40 5.0
31emb|Z12616.2|TAIF4FP26 Triticum aestivum mRNA for eukaryotic ini... 40 5.0
32emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Enceph... 40 5.0
33emb|AL355709.1|IRO532078 Homo sapiens mRNA full length insert cD... 40 5.0
34emb|Z12612.1|XLU3BG X.laevis U3B gene for U3 small nuclear RNA 40 5.0
35gb|AF072165.1| Homo sapiens high-mobility group 20B (HMG20B) mRN... 40 5.0
36dbj|AB110181.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 5.0
37gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 5.0
38emb|CR623751.1| full-length cDNA clone CS0DI030YE03 of Placenta ... 40 5.0
39gb|AF288679.1| Homo sapiens smarce1-related protein mRNA, comple... 40 5.0
40gb|AF146223.1| Homo sapiens HMG domain protein HMGX2 (HMGX2) mRN... 40 5.0
41dbj|AK090733.1| Homo sapiens cDNA FLJ33414 fis, clone BRACE20196... 40 5.0
42dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.0
43ref|NM_143359.1| Drosophila melanogaster CG14065-RA (CG14065), mRNA 40 5.0
44dbj|AK145460.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN fu... 40 5.0
45gb|AC093864.3| Homo sapiens BAC clone RP11-557J10 from 4, comple... 40 5.0
46gb|AF318366.1|AF318366 Homo sapiens pp8857 mRNA, complete cds 40 5.0
47emb|CR456754.1| Homo sapiens full open reading frame cDNA clone ... 40 5.0
48gb|BC109740.1| Bos taurus cDNA clone MGC:134468 IMAGE:8064240, c... 40 5.0
49gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ... 40 5.0
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
51dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
54gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, r... 40 5.0
55gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.0
56gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, r... 40 5.0
57gb|AF331191.1|AF331191 Homo sapiens structural DNA-binding prote... 40 5.0
58dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
59gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, comple... 40 5.0
60gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 40 5.0
61gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 40 5.0
62dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
63ref|NM_001034869.1| Mus musculus similar to double homeobox, 4 (... 40 5.0
64dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
65dbj|AK119382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
66dbj|AK129638.1| Homo sapiens cDNA FLJ26127 fis, clone TMS02495 40 5.0
67dbj|AK109173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
68dbj|AK106880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
69dbj|AK105776.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
70dbj|AK104952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
71dbj|AK103174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
72dbj|AK100210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
73dbj|AK069887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
74dbj|AK068201.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
75gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 10... 40 5.0
76emb|AL355691.1|IROEST079 Homo sapiens EST from clone 267627, ful... 40 5.0
77emb|AL355703.1|IROEST080 Homo sapiens EST from clone 994668, ful... 40 5.0
78gb|BC003505.1| Homo sapiens high-mobility group 20B, mRNA (cDNA ... 40 5.0
79gb|BC004408.1| Homo sapiens high-mobility group 20B, mRNA (cDNA ... 40 5.0
80gb|AC005786.1|AC005786 Homo sapiens chromosome 19, cosmid R31109... 40 5.0
81gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.0
82ref|NM_001038054.1| Bos taurus similar to SWI/SNF-related matrix... 40 5.0
83ref|NM_006339.2| Homo sapiens high-mobility group 20B (HMG20B), ... 40 5.0
84gb|AF072836.1|AF072836 Homo sapiens Sox-like transcriptional fac... 40 5.0
85gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosom... 40 5.0 
>ref|XM_468232.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2701

 Score =  381 bits (192), Expect = e-102
 Identities = 255/276 (92%)
 Strand = Plus / Plus

                                                                       
Query: 96  gaggagcgcctcgacgtgctcaccgccgccggcgacaagacgggcgtctccaagcccagg 155
           ||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||| |||||
Sbjct: 83  gaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccagg 142

                                                                       
Query: 156 tcggaggtgcaccgggacggggactaccaccgcgcggtgcacgtgtggatctactgcgag 215
           |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||
Sbjct: 143 tcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacagcgag 202

                                                                       
Query: 216 agcaccggggagctgctgctgcagcgccgcgccgactgcaaggactcgtggcccggccag 275
           |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 203 agcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccggccag 262

                                                                       
Query: 276 tgggacatctccagcgccggccacgtctccgccggggactcctccctctcctccgcgcgg 335
           |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |
Sbjct: 263 tgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgcgcag 322

                                               
Query: 336 agggagctccaggaagaactaggcatcgagcttcca 371
            |||||||| | ||||||||||||||| | ||||||
Sbjct: 323 cgggagctcgatgaagaactaggcatcaaacttcca 358
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>dbj|AK072317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G15, full
           insert sequence
          Length = 2701

 Score =  373 bits (188), Expect = e-100
 Identities = 254/276 (92%)
 Strand = Plus / Plus

                                                                       
Query: 96  gaggagcgcctcgacgtgctcaccgccgccggcgacaagacgggcgtctccaagcccagg 155
           ||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||| |||||
Sbjct: 83  gaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccagg 142

                                                                       
Query: 156 tcggaggtgcaccgggacggggactaccaccgcgcggtgcacgtgtggatctactgcgag 215
           |||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||| |||||
Sbjct: 143 tcggaggtgcacagggacggcgactaccaccgggcggtgcgcgtgtggatctacagcgag 202

                                                                       
Query: 216 agcaccggggagctgctgctgcagcgccgcgccgactgcaaggactcgtggcccggccag 275
           |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 203 agcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccggccag 262

                                                                       
Query: 276 tgggacatctccagcgccggccacgtctccgccggggactcctccctctcctccgcgcgg 335
           |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |
Sbjct: 263 tgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgcgcag 322

                                               
Query: 336 agggagctccaggaagaactaggcatcgagcttcca 371
            |||||||| | ||||||||||||||| | ||||||
Sbjct: 323 cgggagctcgatgaagaactaggcatcaaacttcca 358
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  289 bits (146), Expect = 3e-75
 Identities = 173/182 (95%)
 Strand = Plus / Plus

                                                                            
Query: 152      caggtcggaggtgcaccgggacggggactaccaccgcgcggtgcacgtgtggatctactg 211
                |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 33728811 caggtcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacag 33728870

                                                                            
Query: 212      cgagagcaccggggagctgctgctgcagcgccgcgccgactgcaaggactcgtggcccgg 271
                |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 33728871 cgagagcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccgg 33728930

                                                                            
Query: 272      ccagtgggacatctccagcgccggccacgtctccgccggggactcctccctctcctccgc 331
                |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 33728931 ccagtgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgc 33728990

                  
Query: 332      gc 333
                ||
Sbjct: 33728991 gc 33728992



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                            
Query: 96       gaggagcgcctcgacgtgctcaccgccgccggcgacaagacgggcgtctccaagcccagg 155
                ||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||| |||||
Sbjct: 33728638 gaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccagg 33728697
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>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1249_F12
          Length = 133205

 Score =  289 bits (146), Expect = 3e-75
 Identities = 173/182 (95%)
 Strand = Plus / Plus

                                                                         
Query: 152   caggtcggaggtgcaccgggacggggactaccaccgcgcggtgcacgtgtggatctactg 211
             |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 97218 caggtcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacag 97277

                                                                         
Query: 212   cgagagcaccggggagctgctgctgcagcgccgcgccgactgcaaggactcgtggcccgg 271
             |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 97278 cgagagcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccgg 97337

                                                                         
Query: 272   ccagtgggacatctccagcgccggccacgtctccgccggggactcctccctctcctccgc 331
             |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 97338 ccagtgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgc 97397

               
Query: 332   gc 333
             ||
Sbjct: 97398 gc 97399



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 96    gaggagcgcctcgacgtgctcaccgccgccggcgacaagacgggcgtctccaagcccagg 155
             ||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||| |||||
Sbjct: 97045 gaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccagg 97104
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>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0700F06
          Length = 139277

 Score =  289 bits (146), Expect = 3e-75
 Identities = 173/182 (95%)
 Strand = Plus / Plus

                                                                         
Query: 152   caggtcggaggtgcaccgggacggggactaccaccgcgcggtgcacgtgtggatctactg 211
             |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 59678 caggtcggaggtgcacagggacggcgactaccaccgggcggtgcacgtgtggatctacag 59737

                                                                         
Query: 212   cgagagcaccggggagctgctgctgcagcgccgcgccgactgcaaggactcgtggcccgg 271
             |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 59738 cgagagcaccggggagctgctgctgcagcgccgcgcggactgcaaggacacgtggcccgg 59797

                                                                         
Query: 272   ccagtgggacatctccagcgccggccacgtctccgccggggactcctccctctcctccgc 331
             |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 59798 ccagtgggacatctccagcgccggccacatctccgccggcgactcctctctctcctccgc 59857

               
Query: 332   gc 333
             ||
Sbjct: 59858 gc 59859



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 96    gaggagcgcctcgacgtgctcaccgccgccggcgacaagacgggcgtctccaagcccagg 155
             ||||||||||||||||| |||||||||| |||||| ||||| |||| ||||||| |||||
Sbjct: 59505 gaggagcgcctcgacgtcctcaccgccggcggcgagaagacaggcgcctccaaggccagg 59564
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>ref|NM_204433.1| Gallus gallus cyclin-dependent kinase inhibitor 2A (melanoma, p16,
           inhibits CDK4) (CDKN2A), mRNA
          Length = 1917

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 225 gagctgctgctgcagcgccgcgccgac 251
           |||||||||||||||||| ||||||||
Sbjct: 362 gagctgctgctgcagcgcggcgccgac 388
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>ref|NM_204434.1| Gallus gallus ARF tumor suppressor (LOC395077), mRNA
          Length = 1546

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 225 gagctgctgctgcagcgccgcgccgac 251
           |||||||||||||||||| ||||||||
Sbjct: 356 gagctgctgctgcagcgcggcgccgac 382
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>gb|AY138247.1| Gallus gallus p15INK4b tumor suppressor mRNA, complete cds
          Length = 1917

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 225 gagctgctgctgcagcgccgcgccgac 251
           |||||||||||||||||| ||||||||
Sbjct: 362 gagctgctgctgcagcgcggcgccgac 388
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>gb|AY138246.1| Gallus gallus p15INK4b tumor suppressor and ARF tumor suppressor genes,
             complete cds
          Length = 18365

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 225   gagctgctgctgcagcgccgcgccgac 251
             |||||||||||||||||| ||||||||
Sbjct: 15991 gagctgctgctgcagcgcggcgccgac 16017



 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 225  gagctgctgctgcagcgccgcgccgac 251
            |||||||||||||||||| ||||||||
Sbjct: 3883 gagctgctgctgcagcgcggcgccgac 3909
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>gb|AY138245.1| Gallus gallus ARF tumor suppressor mRNA, complete cds
          Length = 1546

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 225 gagctgctgctgcagcgccgcgccgac 251
           |||||||||||||||||| ||||||||
Sbjct: 356 gagctgctgctgcagcgcggcgccgac 382
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>ref|XM_531991.2| PREDICTED: Canis familiaris similar to bile acid beta-glucosidase
           (LOC474760), mRNA
          Length = 4325

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 220 ccggggagctgctgctgcagcg 241
           ||||||||||||||||||||||
Sbjct: 489 ccggggagctgctgctgcagcg 468
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>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186968

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 218   caccggggagctgctgctgcag 239
             ||||||||||||||||||||||
Sbjct: 80875 caccggggagctgctgctgcag 80896
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>ref|XM_231705.3| PREDICTED: Rattus norvegicus similar to Ezh2 protein (LOC312299),
           mRNA
          Length = 2586

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 214 agagcaccggggagctgctgct 235
           ||||||||||||||||||||||
Sbjct: 831 agagcaccggggagctgctgct 810
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>gb|DQ399904.1| Nocardiopsis sp. 90127 plasmid pSQ10, complete sequence
          Length = 18219

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 96    gaggagcgcctcgacgtgctcaccg 120
             ||||||||||| |||||||||||||
Sbjct: 15501 gaggagcgcctggacgtgctcaccg 15477
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 102     cgcctcgacgtgctcaccgccgccg 126
               ||||||||||||||||||| |||||
Sbjct: 1628928 cgcctcgacgtgctcaccggcgccg 1628952
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>ref|XM_479829.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 tcgacgtgctcaccgccgccggcg 129
           ||||||||||| ||||||||||||
Sbjct: 364 tcgacgtgctcgccgccgccggcg 387
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>ref|XM_507104.1| PREDICTED Oryza sativa (japonica cultivar-group), B1203H11.11 mRNA
          Length = 1406

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 tcgacgtgctcaccgccgccggcg 129
           ||||||||||| ||||||||||||
Sbjct: 363 tcgacgtgctcgccgccgccggcg 386
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>ref|NM_189939.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ccgccgccggcgacaagacg 137
           ||||||||||||||||||||
Sbjct: 479 ccgccgccggcgacaagacg 498
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>ref|XM_526073.1| PREDICTED: Pan troglodytes similar to SOCS box protein ASB-18
            (LOC470690), mRNA
          Length = 3060

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 228  ctgctgctgcagcgccgcgccgac 251
            ||||||||||||| ||||||||||
Sbjct: 1057 ctgctgctgcagcaccgcgccgac 1080
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>ref|NM_185176.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 834

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 tgctcaccgccgccggcgac 131
           ||||||||||||||||||||
Sbjct: 53  tgctcaccgccgccggcgac 72
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>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0066E19, complete sequence
          Length = 145575

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    agctgctgctgcagcgccgc 245
              ||||||||||||||||||||
Sbjct: 101797 agctgctgctgcagcgccgc 101816
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>gb|AY022960.1| Oryza sativa microsatellite MRG5285 containing (CTG)X8, closest to
           marker S10526, genomic sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 118 ccgccgccggcgacaagacg 137
           ||||||||||||||||||||
Sbjct: 90  ccgccgccggcgacaagacg 71
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>ref|XM_868407.1| PREDICTED: Bos taurus similar to SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily E member
            1-related (SMARCE1-related protein) (HMG domain protein
            HMG20B) (Structural DNA-binding protein BRAF35)
            (BRCA2-associated factor 35) (Sox-like tr... (LOC533921),
            mRNA
          Length = 1691

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  ggagctgctgctgcagcgcc 243
            ||||||||||||||||||||
Sbjct: 1061 ggagctgctgctgcagcgcc 1042
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>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence
          Length = 121683

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    agctccaggaagaactaggc 359
              ||||||||||||||||||||
Sbjct: 107001 agctccaggaagaactaggc 107020
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      tgctcaccgccgccggcgac 131
                ||||||||||||||||||||
Sbjct: 35468307 tgctcaccgccgccggcgac 35468288
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>gb|AF370429.1| Homo sapiens PP7706 mRNA, complete cds
          Length = 2929

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  ggagctgctgctgcagcgcc 243
            ||||||||||||||||||||
Sbjct: 2151 ggagctgctgctgcagcgcc 2132
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>ref|XM_750818.1| Aspergillus fumigatus Af293 poly(A)+RNA transport protein UbaA
            (Afu2g15760) partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  tctccaagcccaggtcggag 161
            ||||||||||||||||||||
Sbjct: 2866 tctccaagcccaggtcggag 2847
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>emb|AJ699059.1| Hordeum vulgare mRNA for putative translation initiation factor 4E
           (eIF4E gene)
          Length = 1040

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 ctcctccctctcctccgcgc 333
           ||||||||||||||||||||
Sbjct: 161 ctcctccctctcctccgcgc 142
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>gb|BC021585.1| Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:32098
           IMAGE:4873122), complete cds
          Length = 1503

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 727 ggagctgctgctgcagcgcc 708
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>gb|BC002552.2| Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:1965
           IMAGE:3138919), complete cds
          Length = 1376

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 815 ggagctgctgctgcagcgcc 796
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>emb|Z12616.2|TAIF4FP26 Triticum aestivum mRNA for eukaryotic initiation factor 4E p26
           subunit (eIF4E gene)
          Length = 894

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 ctcctccctctcctccgcgc 333
           ||||||||||||||||||||
Sbjct: 57  ctcctccctctcctccgcgc 38
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>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 226576

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    gcgagagcaccggggagctg 230
              ||||||||||||||||||||
Sbjct: 100823 gcgagagcaccggggagctg 100842
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>emb|AL355709.1|IRO532078 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 532078
          Length = 1544

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 767 ggagctgctgctgcagcgcc 748
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>emb|Z12612.1|XLU3BG X.laevis U3B gene for U3 small nuclear RNA
          Length = 999

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 ctcctccctctcctccgcgc 333
           ||||||||||||||||||||
Sbjct: 162 ctcctccctctcctccgcgc 143
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>gb|AF072165.1| Homo sapiens high-mobility group 20B (HMG20B) mRNA, complete cds
          Length = 1520

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 731 ggagctgctgctgcagcgcc 712
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>dbj|AB110181.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, partial cds, clone: 13YPR054
          Length = 1092

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 tgctcaccgccgccggcgac 131
           ||||||||||||||||||||
Sbjct: 64  tgctcaccgccgccggcgac 83
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    ggggagctgctgctgcagcg 241
              ||||||||||||||||||||
Sbjct: 561784 ggggagctgctgctgcagcg 561765
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>emb|CR623751.1| full-length cDNA clone CS0DI030YE03 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 976

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 217 ggagctgctgctgcagcgcc 198
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>gb|AF288679.1| Homo sapiens smarce1-related protein mRNA, complete cds
          Length = 1108

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 757 ggagctgctgctgcagcgcc 738
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>gb|AF146223.1| Homo sapiens HMG domain protein HMGX2 (HMGX2) mRNA, complete cds
          Length = 1524

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 767 ggagctgctgctgcagcgcc 748
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>dbj|AK090733.1| Homo sapiens cDNA FLJ33414 fis, clone BRACE2019618, highly similar
           to Homo sapiens HMG domain protein HMGX2 (HMGX2) mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 719 ggagctgctgctgcagcgcc 700
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 233     gctgcagcgccgcgccgactgcaa 256
               ||||||||||||||||||| ||||
Sbjct: 2052953 gctgcagcgccgcgccgaccgcaa 2052976
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>ref|NM_143359.1| Drosophila melanogaster CG14065-RA (CG14065), mRNA
          Length = 846

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 173 cggggactaccaccgcgcggtgcacgtg 200
           ||||||||||| |||||||| |||||||
Sbjct: 551 cggggactaccgccgcgcggcgcacgtg 524
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>dbj|AK145460.1| Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched
           library, clone:I0C0048L09 product:weakly similar to
           Homeobox-like sequence. Part of tandem repeat (Fragment)
           [Homo sapiens], full insert sequence
          Length = 1814

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 agctccaggaagaactaggc 359
           ||||||||||||||||||||
Sbjct: 231 agctccaggaagaactaggc 250
to top
>gb|AC093864.3| Homo sapiens BAC clone RP11-557J10 from 4, complete sequence
          Length = 128335

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    gcccggccagtgggacatct 285
              ||||||||||||||||||||
Sbjct: 102335 gcccggccagtgggacatct 102316
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>gb|AF318366.1|AF318366 Homo sapiens pp8857 mRNA, complete cds
          Length = 2423

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  ggagctgctgctgcagcgcc 243
            ||||||||||||||||||||
Sbjct: 1647 ggagctgctgctgcagcgcc 1628
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>emb|CR456754.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0419D for
           gene HMG20B, high-mobility group 20B; complete cds,
           incl. stopcodon
          Length = 648

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 451 ggagctgctgctgcagcgcc 432
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>gb|BC109740.1| Bos taurus cDNA clone MGC:134468 IMAGE:8064240, complete cds
          Length = 1758

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 826 ggagctgctgctgcagcgcc 807
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>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    ctcctccctctcctccgcgc 333
              ||||||||||||||||||||
Sbjct: 102017 ctcctccctctcctccgcgc 101998
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 226      agctgctgctgcagcgccgc 245
                ||||||||||||||||||||
Sbjct: 18703464 agctgctgctgcagcgccgc 18703483
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 106     tcgacgtgctcaccgccgccggcg 129
               ||||||||||| ||||||||||||
Sbjct: 1122582 tcgacgtgctcgccgccgccggcg 1122559
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 112      tgctcaccgccgccggcgac 131
                ||||||||||||||||||||
Sbjct: 35558379 tgctcaccgccgccggcgac 35558360
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 118      ccgccgccggcgacaagacg 137
                ||||||||||||||||||||
Sbjct: 39919910 ccgccgccggcgacaagacg 39919891
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>gb|AC009345.7|AC009345 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone
              BACR28F20, complete sequence
          Length = 158895

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 173    cggggactaccaccgcgcggtgcacgtg 200
              ||||||||||| |||||||| |||||||
Sbjct: 125097 cggggactaccgccgcgcggcgcacgtg 125124
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    ctcgacgtgctcaccgccgccggc 128
              ||||||||||| ||||||||||||
Sbjct: 278423 ctcgacgtgcttaccgccgccggc 278400
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>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone
             BACR14L13, complete sequence
          Length = 197348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 173   cggggactaccaccgcgcggtgcacgtg 200
             ||||||||||| |||||||| |||||||
Sbjct: 28312 cggggactaccgccgcgcggcgcacgtg 28339
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>gb|AF331191.1|AF331191 Homo sapiens structural DNA-binding protein BRAF35 mRNA, complete
           cds
          Length = 954

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 757 ggagctgctgctgcagcgcc 738
to top
>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413C03
          Length = 162161

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   ccgccgccggcgacaagacg 137
             ||||||||||||||||||||
Sbjct: 11361 ccgccgccggcgacaagacg 11342
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>gb|AC019068.8| Homo sapiens BAC clone RP11-201F21 from 2, complete sequence
          Length = 131359

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 228   ctgctgctgcagcgccgcgccgac 251
             ||||||||||||| ||||||||||
Sbjct: 18865 ctgctgctgcagcaccgcgccgac 18842
to top
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
             sequence
          Length = 133846

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tgctcaccgccgccggcgac 131
             ||||||||||||||||||||
Sbjct: 19319 tgctcaccgccgccggcgac 19338
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence,
            complete sequence
          Length = 145290

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  tgctcaccgccgccggcgac 131
            ||||||||||||||||||||
Sbjct: 1270 tgctcaccgccgccggcgac 1251
to top
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004D12
          Length = 138136

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ccgccgccggcgacaagacg 137
              ||||||||||||||||||||
Sbjct: 100618 ccgccgccggcgacaagacg 100599
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>ref|NM_001034869.1| Mus musculus similar to double homeobox, 4 (LOC245263), mRNA
          Length = 1814

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 agctccaggaagaactaggc 359
           ||||||||||||||||||||
Sbjct: 231 agctccaggaagaactaggc 250
to top
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1203H11
          Length = 156561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 106   tcgacgtgctcaccgccgccggcg 129
             ||||||||||| ||||||||||||
Sbjct: 35819 tcgacgtgctcgccgccgccggcg 35796
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>dbj|AK119382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-B05, full
           insert sequence
          Length = 2822

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 agctgctgctgcagcgccgc 245
           ||||||||||||||||||||
Sbjct: 271 agctgctgctgcagcgccgc 290
to top
>dbj|AK129638.1| Homo sapiens cDNA FLJ26127 fis, clone TMS02495
          Length = 1476

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 894 ggagctgctgctgcagcgcc 875
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>dbj|AK109173.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-H08, full
           insert sequence
          Length = 556

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 ccgccgccggcgacaagacg 137
           ||||||||||||||||||||
Sbjct: 158 ccgccgccggcgacaagacg 177
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>dbj|AK106880.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-F01, full
           insert sequence
          Length = 1177

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 agctgctgctgcagcgccgc 245
           ||||||||||||||||||||
Sbjct: 265 agctgctgctgcagcgccgc 284
to top
>dbj|AK105776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F08, full
           insert sequence
          Length = 1200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 tgctcaccgccgccggcgac 131
           ||||||||||||||||||||
Sbjct: 54  tgctcaccgccgccggcgac 73
to top
>dbj|AK104952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D12, full
           insert sequence
          Length = 1405

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 tcgacgtgctcaccgccgccggcg 129
           ||||||||||| ||||||||||||
Sbjct: 363 tcgacgtgctcgccgccgccggcg 386
to top
>dbj|AK103174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121H05, full
            insert sequence
          Length = 2025

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  agctgctgctgcagcgccgc 245
            ||||||||||||||||||||
Sbjct: 1089 agctgctgctgcagcgccgc 1070
to top
>dbj|AK100210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043A12, full
            insert sequence
          Length = 2396

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  agctgctgctgcagcgccgc 245
            ||||||||||||||||||||
Sbjct: 1462 agctgctgctgcagcgccgc 1443
to top
>dbj|AK069887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038B06, full
           insert sequence
          Length = 1370

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 106 tcgacgtgctcaccgccgccggcg 129
           ||||||||||| ||||||||||||
Sbjct: 364 tcgacgtgctcgccgccgccggcg 387
to top
>dbj|AK068201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146E23, full
           insert sequence
          Length = 1084

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 tgctcaccgccgccggcgac 131
           ||||||||||||||||||||
Sbjct: 51  tgctcaccgccgccggcgac 70
to top
>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the
            complete sequence
          Length = 239049

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 173  cggggactaccaccgcgcggtgcacgtg 200
            ||||||||||| |||||||| |||||||
Sbjct: 3991 cggggactaccgccgcgcggcgcacgtg 4018
to top
>emb|AL355691.1|IROEST079 Homo sapiens EST from clone 267627, full insert
          Length = 1501

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 723 ggagctgctgctgcagcgcc 704
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>emb|AL355703.1|IROEST080 Homo sapiens EST from clone 994668, full insert
          Length = 1548

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 769 ggagctgctgctgcagcgcc 750
to top
>gb|BC003505.1| Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:10419
           IMAGE:3609369), complete cds
          Length = 1583

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 813 ggagctgctgctgcagcgcc 794
to top
>gb|BC004408.1| Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:11001
           IMAGE:3638942), complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 763 ggagctgctgctgcagcgcc 744
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>gb|AC005786.1|AC005786 Homo sapiens chromosome 19, cosmid R31109, complete sequence
          Length = 44913

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggagctgctgctgcagcgcc 243
             ||||||||||||||||||||
Sbjct: 42926 ggagctgctgctgcagcgcc 42907
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     tcaccgccgccggcgacaag 134
               ||||||||||||||||||||
Sbjct: 3215628 tcaccgccgccggcgacaag 3215647
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>ref|NM_001038054.1| Bos taurus similar to SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily E
           member 1-related (SMARCE1-related protein) (HMG domain
           protein HMG20B) (Structural DNA-binding protein BRAF35)
           (BRCA2-associated factor 35) (Sox-like tr...
           (MGC134468), mRNA
          Length = 1758

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 826 ggagctgctgctgcagcgcc 807
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>ref|NM_006339.2| Homo sapiens high-mobility group 20B (HMG20B), mRNA
          Length = 1584

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 825 ggagctgctgctgcagcgcc 806
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>gb|AF072836.1|AF072836 Homo sapiens Sox-like transcriptional factor mRNA, complete cds
          Length = 1232

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 ggagctgctgctgcagcgcc 243
           ||||||||||||||||||||
Sbjct: 470 ggagctgctgctgcagcgcc 451
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>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete
             sequence
          Length = 105368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   agctccaggaagaactaggc 359
             ||||||||||||||||||||
Sbjct: 30566 agctccaggaagaactaggc 30547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,511,476
Number of Sequences: 3902068
Number of extensions: 2511476
Number of successful extensions: 67395
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66558
Number of HSP's gapped (non-prelim): 837
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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