ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl16b05 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 97.8 bits (242), Expect = 6e-21 Identities = 40/59 (67%), Positives = 51/59 (86%) Frame = +1 Query: 208 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + VTYDH+S++I+G+RR+LIS SIHYPRS P MWP L+ +AK+GG D I+TYVFWNGHE Sbjct: 25 ASVTYDHKSVIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHE 83
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 95.5 bits (236), Expect = 3e-20 Identities = 37/59 (62%), Positives = 51/59 (86%) Frame = +1 Query: 208 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + V+YDH++++++G+R++LIS SIHYPRS P MWP L+ +AKEGG D I+TYVFWNGHE Sbjct: 22 ASVSYDHKAIIVNGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHE 80
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 94.4 bits (233), Expect = 6e-20 Identities = 37/59 (62%), Positives = 51/59 (86%) Frame = +1 Query: 208 SGVTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + V+YDH++++I+G++R+LIS SIHYPRS P MWP L+ +AK+GG D I+TYVFWNGHE Sbjct: 24 ASVSYDHKAIIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHE 82
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 85.1 bits (209), Expect = 4e-17 Identities = 35/57 (61%), Positives = 46/57 (80%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 V++D R++ I G+RR+L+S SIHYPRS MWP L+++AK+GG D IETYVFWN HE Sbjct: 27 VSHDERAITIDGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIETYVFWNAHE 83
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 81.3 bits (199), Expect = 5e-16 Identities = 33/57 (57%), Positives = 45/57 (78%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 V YD+R++ I+ +RR+L+S SIHYPRS P MWP ++ +AK+ D I+TYVFWNGHE Sbjct: 31 VWYDYRAIKINDQRRILLSGSIHYPRSTPEMWPDIIEKAKDSQLDVIQTYVFWNGHE 87
>BGAL_CANFA (Q9TRY9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 668 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + Y H + G+ IS SIHY R W + + K G + I+TYV WN HE Sbjct: 35 IDYSHNRFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHE 91
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + Y H + G+ IS SIHY R W + + K G + I+TYV WN HE Sbjct: 35 IDYGHNRFLKDGQPFRYISGSIHYFRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHE 91
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 41.2 bits (95), Expect = 6e-04 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + Y S + G+ IS SIHY R W + + K G + I+TYV WN HE Sbjct: 34 IDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHE 90
>BGAL_XANMN (P48982) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 598 Score = 39.7 bits (91), Expect = 0.002 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = +1 Query: 238 VISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWN 375 V G+ L+S +IH+ R A W + +A+ G + +ETYVFWN Sbjct: 38 VRDGKPYQLLSGAIHFQRIPRAYWKDRLQKARALGLNTVETYVFWN 83
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/57 (35%), Positives = 27/57 (47%) Frame = +1 Query: 214 VTYDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 + Y + G+ IS SIHY R W + + K G + I+TYV WN HE Sbjct: 34 IAYSQDRFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNTIQTYVPWNFHE 90
>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 647 Score = 35.0 bits (79), Expect = 0.044 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +1 Query: 220 YDHRSLVISGRRRLLISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFWNGHE 384 Y + G+ IS SIHY R W + + K G + I+ YV WN HE Sbjct: 37 YSRDRFLKDGQPFRYISGSIHYFRIPRFYWEDRLLKMKMAGLNAIQMYVPWNFHE 91
>ZDH20_HUMAN (Q5W0Z9) Probable palmitoyltransferase ZDHHC20 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 20) (DHHC-20) Length = 365 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -1 Query: 138 GDGGHGWSRAESEAWRCAYGAARRWWL 58 G G+G+S S+ WR +G +++WL Sbjct: 253 GPDGNGFSLGCSKNWRQVFGDEKKYWL 279
>SOSD1_RAT (Q642G2) Sclerostin domain-containing protein 1 precursor (Uterine| sensitization-associated gene 1 protein) (USAG-1) (Wnt-signaling modulator) Length = 206 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -1 Query: 141 GGDGGHGWSRAESEAWRCAYGAAR 70 GG G WSR S+ WRC R Sbjct: 116 GGYGTKYWSRRSSQEWRCVNDKTR 139
>SOSD1_PONPY (Q5R5D2) Sclerostin domain-containing protein 1 precursor| Length = 206 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -1 Query: 141 GGDGGHGWSRAESEAWRCAYGAAR 70 GG G WSR S+ WRC R Sbjct: 116 GGYGTKYWSRRSSQEWRCVNDKTR 139
>SOSD1_MOUSE (Q9CQN4) Sclerostin domain-containing protein 1 precursor| (Ectodermal BMP inhibitor) (Ectodin) (Uterine sensitization-associated gene 1 protein) (USAG-1) (Sclerostin-like protein) Length = 206 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -1 Query: 141 GGDGGHGWSRAESEAWRCAYGAAR 70 GG G WSR S+ WRC R Sbjct: 116 GGYGTKYWSRRSSQEWRCVNDKTR 139
>SOSD1_HUMAN (Q6X4U4) Sclerostin domain-containing protein 1 precursor| (Ectodermal BMP inhibitor) (Ectodin) (Uterine sensitization-associated gene 1 protein) (USAG-1) Length = 206 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -1 Query: 141 GGDGGHGWSRAESEAWRCAYGAAR 70 GG G WSR S+ WRC R Sbjct: 116 GGYGTKYWSRRSSQEWRCVNDKTR 139
>SOSD1_CHICK (Q6VYA3) Sclerostin domain-containing protein 1 precursor| (Wnt-signaling modulator) Length = 206 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 12/24 (50%) Frame = -1 Query: 141 GGDGGHGWSRAESEAWRCAYGAAR 70 GG G WSR S+ WRC R Sbjct: 116 GGYGTKYWSRRSSQEWRCVNDKTR 139
>7LESS_DROME (P13368) Protein sevenless (EC 2.7.10.1)| Length = 2554 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = +1 Query: 241 ISGRRRLL-----ISASIHYPRSVPAMWPKLVAEAKEGGADCIETYVFW 372 I G +RLL + H P S PA ++ AE D I+ V+W Sbjct: 1438 IEGEQRLLWVNEHVELLTHVPGSAPAKLARMRAEVLALAVDWIQRIVYW 1486 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,247,569 Number of Sequences: 219361 Number of extensions: 219231 Number of successful extensions: 858 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 858 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
