ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl16b04 |
|---|---|
| Clone Library Name | barley_pub |
>VE2_HPV15 (P36784) Regulatory protein E2| Length = 382 Score = 34.3 bits (77), Expect = 0.17 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -1 Query: 390 AAESPLASAQTSSLAILTG--APARTSARRLGNRRSQSQSFLEASQEKREGAQVERNWRR 217 A ESP A+ Q SS ++ + P RT ARR NR+ S + ++KR+G + E RR Sbjct: 141 APESP-ANRQLSSTSVSSRKRTPPRTEARRY-NRKESSPTTTTTRRQKRQGQRQEDTARR 198 Query: 216 SR 211 SR Sbjct: 199 SR 200
>CP007_HUMAN (Q9Y2B5) Protein C16orf7 (Protein ATP-BL)| Length = 438 Score = 33.5 bits (75), Expect = 0.29 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -2 Query: 404 VQASQQLN-RLSPPPKQAASRFSPEPPQE-LQPGGWEIGGARASLFLKPAKRRGREHRWS 231 ++ SQ L+ LSPP AA R PP LQPG W + + L R R WS Sbjct: 356 LRPSQSLHCMLSPPEPSAAPRPQDSPPTPPLQPGPWGLPHPWGTPHLDCQTRTARSRTWS 415 Query: 230 GTGG 219 + G Sbjct: 416 SSWG 419
>PROP1_CANFA (Q9TTD8) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 33.1 bits (74), Expect = 0.37 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHPP TG LPC PP + + L P K Sbjct: 198 LHPPPTGHLPCPPPPTMLPLSLEPPK 223
>EMSY_HUMAN (Q7Z589) Protein EMSY| Length = 1322 Score = 28.5 bits (62), Expect(2) = 0.41 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -2 Query: 467 KQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQ 324 K + + P T + AV+ +QQL +L P Q P+ PQ Sbjct: 1028 KDRQLPTLMAQPPQTVVQVLAVKTTQQLPKLQQAPNQPKIYVQPQTPQ 1075 Score = 23.1 bits (48), Expect(2) = 0.41 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -1 Query: 288 QSQSFLEASQEKREGAQVER 229 QSQ L AS EK+ +QVE+ Sbjct: 1075 QSQMSLPASSEKQTASQVEQ 1094
>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing| factor SRP75) (SRP001LB) Length = 494 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/57 (35%), Positives = 31/57 (54%) Frame = -1 Query: 327 ARTSARRLGNRRSQSQSFLEASQEKREGAQVERNWRRSRQRHAAAFNF*AKRSGQRD 157 +R+ +R G RS+S+S S++KR+G + R RSR R + KR +RD Sbjct: 330 SRSRSRSKGGSRSRSRS-RSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRD 385
>VIV1_MAIZE (P26307) Regulatory protein viviparous-1| Length = 691 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = -1 Query: 393 PAAESPLASAQTSSLAILTGAPARTSARRLGNRRSQSQSFLEASQEKREGAQVERNWR 220 P ++S + A SSL AP +T G R+ L A+ +KR+GA+ ++N R Sbjct: 458 PLSKSNSSRAPPSSLEAAAAAP-QTKPAPAGARQDDIHHRLAAASDKRQGAKADKNLR 514
>TSC2_MOUSE (Q61037) Tuberin (Tuberous sclerosis 2 homolog protein)| Length = 1814 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/96 (23%), Positives = 38/96 (39%) Frame = -2 Query: 470 GKQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGG 291 G+ P RS + A+ + +R++ PP+ SP P L+P G+ I Sbjct: 1409 GRLSPEAKVRSQSGILDGEAATWSATGEESRITVPPEGPLPSSSPRSPSGLRPRGYTISD 1468 Query: 290 ARASLFLKPAKRRGREHRWSGTGGEADNGTPPLLTF 183 + S K +R + R + + E G P F Sbjct: 1469 SAPSRRGKRVERDNFKSRAAASSAEKVPGINPSFVF 1504
>REXO3_YARLI (Q6CFE7) RNA exonuclease 3 (EC 3.1.-.-)| Length = 757 Score = 30.8 bits (68), Expect = 1.9 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Frame = -3 Query: 454 SSTPAAWLHPPRTGSLPCRPPSS*IASRL--RPNKQPRDSHRSPRKNFSQAVGKSEEPEP 281 ++T A +T S P P+ + S L ++QP + R PR F+ EP+ Sbjct: 488 ATTSAPSAKSTKTASRPASTPTKSLTSSLDLEKSRQPFNKARRPRTIFNGPAVNQREPDI 547 Query: 280 VFS*SQPREEGGSTGGAELAEKQTTARRR 194 + R G S G A+ E+ + R R Sbjct: 548 TLE-TMKRGIGESRGQADSQERSSEPRER 575
>TSC2_RAT (P49816) Tuberin (Tuberous sclerosis 2 homolog protein)| Length = 1809 Score = 30.8 bits (68), Expect = 1.9 Identities = 23/96 (23%), Positives = 37/96 (38%) Frame = -2 Query: 470 GKQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGG 291 G+ P RS + A + +R++ PP+ SP P L+P G+ I Sbjct: 1410 GRLSPEAKVRSQSGILDGEAATWSAPGEESRITVPPEGPLPSSSPRSPSGLRPRGYTISD 1469 Query: 290 ARASLFLKPAKRRGREHRWSGTGGEADNGTPPLLTF 183 + S K +R + R + + E G P F Sbjct: 1470 SAPSRRGKRVERDNFKSRTAASSAEKVPGINPSFVF 1505
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Frame = -2 Query: 371 PPPKQAASRFSPEPPQELQP--GGWE------IGGARASLFLKPAKRRGREHRWSGTGGE 216 PPP++ R+ P PQ++ G E + LF P G R + GGE Sbjct: 206 PPPQRPPPRWPPPSPQKISETRAGSENTAQTLFSHSENKLFSHPMGEGGEGDRGTAGGGE 265 Query: 215 ADNGTPP 195 D PP Sbjct: 266 GDRDDPP 272
>GRPE_NEUCR (Q9P5U4) GrpE protein homolog, mitochondrial precursor| Length = 238 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = -1 Query: 411 LCRAGLPAAESPLASAQTSSLAILTGAPARTSARRLGNRRSQSQSFLEASQEKREG 244 LC AA+ P+AS A T AP SA R + ++ + + E++EG Sbjct: 13 LCSGARVAAQRPIASQIFQMQAARTAAPQLRSAARWYSAEAEGEKKADEGAEQKEG 68
>GDF15_RAT (Q9Z0J6) Growth/differentiation factor 15 precursor (GDF-15)| Length = 303 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = -2 Query: 437 MAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAK 258 + PS+ W + ++ P + R +P P + P G GAR L L+ A Sbjct: 128 LTPSSRPWDITRPLQRAISLQGPHARALRLRLAPPPDLAVLPSG----GARLELHLRSAA 183 Query: 257 RRGR 246 RGR Sbjct: 184 GRGR 187
>AB1IP_BRARE (Q6PFT9) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 646 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 398 ASQQLNRLSPPPKQAASRFSPEPPQELQP 312 +S ++N+ PPPK S F P P +L P Sbjct: 502 SSTKVNKFPPPPKFPQSSFPPPPMDDLPP 530
>SEPP1_MOUSE (P70274) Selenoprotein P precursor (SeP) (Plasma selenoprotein P)| Length = 380 Score = 29.3 bits (64), Expect = 5.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 Query: 78 SKSRQPPGHHRHHSIQNPHPDEHLG 152 +K+ +P H HH N H EHLG Sbjct: 195 NKTAEPSEAHSHHKHHNKHGQEHLG 219
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 29.3 bits (64), Expect = 5.4 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 9/95 (9%) Frame = -2 Query: 470 GKQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQELQP------- 312 GK IK + S+++ I A AS + SPPP +A +R SP P+ P Sbjct: 194 GKSGSIKQEHTEIHSSSSAISAAAASTVM---SPPPAEA-TRSSPATPEGGGPAGDGSGA 249 Query: 311 --GGWEIGGARASLFLKPAKRRGREHRWSGTGGEA 213 GG GG+ A + + + G +G+GG + Sbjct: 250 TGGGNTSGGSTAGVAINEHQNNG-----NGSGGSS 279
>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific| (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) Length = 1739 Score = 29.3 bits (64), Expect = 5.4 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = -2 Query: 368 PPKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAKRRGREHRWSGTGGEADNGTP--- 198 P + + SP+ P+ L PG ++ G ++S +G R G+ GE P Sbjct: 817 PSVPGSMKLSPQDPRPLSPGALQLAGEKSS-------EKGLRERAYGSSGELITSLPISI 869 Query: 197 PLLTFE 180 PL T + Sbjct: 870 PLSTVQ 875
>GLGB_METCA (Q608L5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 740 Score = 29.3 bits (64), Expect = 5.4 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +2 Query: 260 WLASRKDWLWLLRFPNRLAEVLAGA 334 WLA RKDW WL R P + E+ AG+ Sbjct: 234 WLAQRKDWPWLHR-PLSVYEMHAGS 257
>SEPP1_RAT (P25236) Selenoprotein P precursor (SeP) [Contains: Selenoprotein| Se-P10; Selenoprotein Se-P6; Selenoprotein Se-P2; Selenoprotein Se-P1] Length = 385 Score = 29.3 bits (64), Expect = 5.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 Query: 78 SKSRQPPGHHRHHSIQNPHPDEHLG 152 SK+ +P H HH + H EHLG Sbjct: 195 SKTTEPSEEHNHHKHHDKHGHEHLG 219
>PROP1_MOUSE (P97458) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 223 Score = 29.3 bits (64), Expect = 5.4 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 3/29 (10%) Frame = -3 Query: 469 ASKNLSSTPAAW---LHPPRTGSLPCRPP 392 AS L P W LHP TG LPC PP Sbjct: 180 ASLALPPQPEDWYPTLHPAPTGHLPCPPP 208
>KLRA7_MOUSE (Q60654) Killer cell lectin-like receptor 7 (T-cell surface| glycoprotein Ly-49G) (Ly49-G antigen) (Lymphocyte antigen 49G) Length = 280 Score = 29.3 bits (64), Expect = 5.4 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = +2 Query: 227 FRSTCAPSLFSWLA-----SRKDWLWLLRFPNRLA 316 F APS SW+ +KDW+W+ P++LA Sbjct: 203 FLQNLAPSDISWIGLSYDNKKKDWVWIDNGPSKLA 237
>ZN384_RAT (Q9EQJ4) Zinc finger protein 384 (Nuclear matrix transcription| factor 4) (Nuclear matrix protein 4) (Cas-associated zinc finger protein) Length = 579 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/76 (27%), Positives = 28/76 (36%) Frame = -2 Query: 407 AVQASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAKRRGREHRWSG 228 A QASQQ + PPP P+PP PG GG Sbjct: 503 ASQASQQQQQQQPPP--------PQPPHFQSPGAAPQGGG-------------------- 534 Query: 227 TGGEADNGTPPLLTFE 180 GG+++ PP +F+ Sbjct: 535 -GGDSNQNPPPQCSFD 549
>MATK_HUMAN (P42679) Megakaryocyte-associated tyrosine-protein kinase (EC| 2.7.10.2) (Tyrosine-protein kinase CTK) (Protein kinase HYL) (Hematopoietic consensus tyrosine-lacking kinase) Length = 507 Score = 28.9 bits (63), Expect = 7.1 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 5/74 (6%) Frame = -2 Query: 401 QASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAKRRGREHRWSG-- 228 +A ++ R+ PP P P L WE AR F K A++ RE R +G Sbjct: 435 EAVEKGYRMEPPEG------CPGPVHVLMSSCWEAEPARRPPFRKLAEKLARELRSAGAP 488 Query: 227 ---TGGEADNGTPP 195 +G +AD T P Sbjct: 489 ASVSGQDADGSTSP 502
>KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (r-ERG) (RERG) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1163 Score = 28.9 bits (63), Expect = 7.1 Identities = 15/47 (31%), Positives = 20/47 (42%) Frame = -3 Query: 358 KQPRDSHRSPRKNFSQAVGKSEEPEPVFS*SQPREEGGSTGGAELAE 218 + P SP + + G+S P + S PR G S GG L E Sbjct: 933 ESPSSGPSSPESSEDEGPGRSSSPLRLVPFSSPRPPGDSPGGEPLTE 979
>KCNH2_RABIT (Q8WNY2) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go-related gene potassium channel 1) (ERG1) (RERG) (ra-erg) (Ether-a-go-go-related protein 1) (Eag-related protein 1) Length = 1161 Score = 28.9 bits (63), Expect = 7.1 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPN----KQPRDSHRSPRKNFSQAVGKSEEPEPVFS*S 266 L P R G+ P +SR RP + P SP + + G+S P + S Sbjct: 910 LGPGRAGAGP--------SSRGRPGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVPFS 961 Query: 265 QPREEGGSTGGAELAE 218 PR G GG L E Sbjct: 962 SPRPPGEPPGGEPLTE 977
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 28.9 bits (63), Expect = 7.1 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 10/98 (10%) Frame = -2 Query: 392 QQLNRLSPPPKQAASRFSPEPPQEL--QPGGWEIGGARASLFLKPAK--------RRGRE 243 QQL P P P P Q++ Q G A A+ +PA + GR+ Sbjct: 1403 QQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRD 1462 Query: 242 HRWSGTGGEADNGTPPLLTFERSEADKEMATQMLVWMG 129 + G A PP + +A E+A Q +W G Sbjct: 1463 RVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQG 1500
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Frame = -3 Query: 427 PPRTGSLPCRPPSS*IASRLRPNKQPRDSH----RSPRKNFSQAVGKSEEPEPVFS*SQP 260 P R+G P PS S RP P H R+P KN + + P P S S P Sbjct: 1964 PARSGLEPASSPSK--GSEPRPLVPPVSGHATIARTPAKNLAPHHASPDPPAPPASASDP 2021 Query: 259 REE 251 E Sbjct: 2022 HRE 2024
>H2A3_CHICK (P35062) Histone H2A-III| Length = 128 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/44 (40%), Positives = 22/44 (50%) Frame = +2 Query: 290 LLRFPNRLAEVLAGAPVRIARLLVWAEARGDSAAGRPARQRSSS 421 LLR N V AGAPV +A +L + A AG PAR + Sbjct: 33 LLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNPARDNKKT 76
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 7.1 Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Frame = -3 Query: 472 QASKNLSSTPAAWLHPPRTGSLPCRPPSS*IASRLRPNKQPRDS--HRSPRKNFSQAVGK 299 + + N ST AA PR G RP RP PR RS Q + Sbjct: 185 RVANNPFSTGAADRPGPRPGGGGPRPGGG-----PRPGGAPRPQGGQRSGAPRDGQGGPR 239 Query: 298 SEEPEPVFS*SQPREEGGSTGGAELAEKQTTARR 197 + P P PR +GG+ GA E+Q RR Sbjct: 240 GQRPGP--GSGGPRPQGGNAAGAASQERQGGGRR 271
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 28.9 bits (63), Expect = 7.1 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 5/90 (5%) Frame = -2 Query: 449 HTRSMAPSTTNWIFAVQASQQLNR-----LSPPPKQAASRFSPEPPQELQPGGWEIGGAR 285 ++RS++ S T + AV A + R LSPP ++A SP+ P P G G Sbjct: 771 YSRSLSRSVTPPLRAVDARARGRRYSSQSLSPPRRRAERSVSPQRP----PPGRRPRGDS 826 Query: 284 ASLFLKPAKRRGREHRWSGTGGEADNGTPP 195 S P R RE R A P Sbjct: 827 LSRSPSPPPRYAREQRRRRNSSSASASRSP 856
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 28.9 bits (63), Expect = 7.1 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Frame = -2 Query: 380 RLSPPPKQAASRFSPE-------PPQELQPGGWEIGGARASLFLKPAKRRGREHRWSGTG 222 R PP +Q PE PP G +E+ +R + P R+G EH SG G Sbjct: 662 RPPPPHRQTPHELYPEEQPYVRRPPPPQNRGNYEVERSREYVPEAPRPRQGYEHS-SGYG 720 Query: 221 GE 216 G+ Sbjct: 721 GD 722
>SP100_MOUSE (O35892) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear| dot-associated Sp100 protein) Length = 482 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -2 Query: 365 PKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAKRRGREHR 237 P Q A +S +PP + G + +S+ ++ KR GR+ R Sbjct: 291 PSQPAPAYSRKPPTLRRDRGGDTSDTESSIIIRRRKRTGRKKR 333
>PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 225 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHP G LPC PP + L P+K Sbjct: 197 LHPAPAGHLPCPPPPPMLPLSLEPSK 222
>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor| (Salivary proline-rich protein Po) (Parotid o protein) [Contains: Protein N1; Glycosylated protein A] Length = 247 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/59 (30%), Positives = 22/59 (37%) Frame = -2 Query: 371 PPPKQAASRFSPEPPQELQPGGWEIGGARASLFLKPAKRRGREHRWSGTGGEADNGTPP 195 PPP+ P PP G GG ++ P G+ R GG GTPP Sbjct: 60 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQ---GPPPHPGKPERPPPQGGNQSQGTPP 115
>DNAE2_NOCFA (Q5Z1D1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1146 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -2 Query: 311 GGWEIGGARASLFLKPAKRRGREHRWSGTGGEAD-NGTPPLLTFERSEAD 165 G GG RA+L+ A R R H GTG AD P + E + AD Sbjct: 970 GAERSGGRRAALWAAGAAARERAHLLPGTGPAADAPALPGMSALELAAAD 1019
>MPIP_YEAST (P23748) M-phase inducer phosphatase (EC 3.1.3.48) (Mitosis| initiation protein MIH1) (Mitotic inducer homolog) Length = 554 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 382 IASRLRPNKQPRDSHRSPRKNFSQAVGKSEEPEPVFS*SQPREEGGST 239 +AS PN RDSH+S S A+ EP P S + R GS+ Sbjct: 413 LASPSNPNFFYRDSHQSSTTMASSALSFRFEPPPKLSLNHRRVSSGSS 460
>EMSY_MOUSE (Q8BMB0) Protein EMSY| Length = 1264 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -2 Query: 467 KQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQ 324 K + + P T + AV+ +QQL +L P Q P+ PQ Sbjct: 978 KDRQLPTLMAQPPQTVVQVLAVKTTQQLPKLQQAPNQPKIYVQPQTPQ 1025
>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2| Length = 2061 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 49 SSSRTQEDSAQNLANLRATIAITPSKIPIQTSIWVAISLSASLRSKVKSGGVPLS 213 + S +EDS Q +AT+ TP+ + + T+ +++ + S ++S P S Sbjct: 1970 TKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGSTGSQARLIQSSHPPAS 2024
>SIF1_DROME (P91621) Protein still life, isoform SIF type 1| Length = 2072 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +1 Query: 49 SSSRTQEDSAQNLANLRATIAITPSKIPIQTSIWVAISLSASLRSKVKSGGVPLS 213 + S +EDS Q +AT+ TP+ + + T+ +++ + S ++S P S Sbjct: 1981 TKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGSTGSQARLIQSSHPPAS 2035
>KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H member 2| (Voltage-gated potassium channel subunit Kv11.1) (Ether-a-go-go related gene potassium channel 1) (H-ERG) (Erg1) (Ether-a-go-go related protein 1) (Eag-related protein 1) (eag homo Length = 1159 Score = 28.5 bits (62), Expect = 9.2 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 4/76 (5%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPN----KQPRDSHRSPRKNFSQAVGKSEEPEPVFS*S 266 L P R G+ P +SR RP + P SP + + G+S P + S Sbjct: 908 LGPGRAGAGP--------SSRGRPGGPWGESPSSGPSSPESSEDEGPGRSSSPLRLVPFS 959 Query: 265 QPREEGGSTGGAELAE 218 PR G GG L E Sbjct: 960 SPRPPGEPPGGEPLME 975
>HXA1_HETFR (Q9IA19) Homeobox protein Hox-A1| Length = 326 Score = 28.5 bits (62), Expect = 9.2 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%) Frame = +3 Query: 60 DPRRLCSKSRQ---PPGHHRHHSIQNPHPD 140 D R + S+S Q PP HH HH HP+ Sbjct: 49 DDRYIVSRSVQIGAPPPHHHHHQSNYTHPN 78
>WC1_NEUCR (Q01371) White collar 1 protein (WC1)| Length = 1167 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = -2 Query: 470 GKQEPIKHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPPQELQPGGWEIGG 291 G P+ + P+TT ++ A+ Q R+ PPP + + P P G GG Sbjct: 296 GMATPVSQDAASTPATTFQSPSLSATTQTIRIGPPPPPSVTNAPTPAPFTSTPSG---GG 352 Query: 290 A 288 A Sbjct: 353 A 353
>PROP1_THEGE (Q3LU41) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHP G LPC PP + L P+K Sbjct: 198 LHPTPAGHLPCPPPPPMLPLSLEPSK 223
>PROP1_HUMAN (O75360) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHP G LPC PP + L P+K Sbjct: 198 LHPAPAGHLPCPPPPPMLPLSLEPSK 223
>PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHP G LPC PP + L P+K Sbjct: 198 LHPAPAGHLPCPPPPPMLPLSLEPSK 223
>PROP1_ALOBE (Q3LU38) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 28.5 bits (62), Expect = 9.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = -3 Query: 433 LHPPRTGSLPCRPPSS*IASRLRPNK 356 LHP G LPC PP + L P+K Sbjct: 198 LHPAPAGHLPCPPPPPMLPLSLEPSK 223
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.5 bits (62), Expect = 9.2 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Frame = -2 Query: 440 SMAPSTTNWIFAVQASQQL-----NRLSPPPKQAASRFSPEPPQELQPGGWEIGGARASL 276 +M+ ++TN + A L N S PP +A+S +P PP PG + A ++ Sbjct: 359 AMSSASTNSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSAS 418 Query: 275 FLKPAKRRGREHRWSGTGGEADNGTPPLLTFERSEADKEMA 153 + A T + PP LT + A + + Sbjct: 419 SIPLAPLPPPPPPSVATSVPSAPPPPPTLTTNKPSASSKQS 459
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 452 KHTRSMAPSTTNWIFAVQASQQLNRLSPPPKQAASRFSPEPP 327 +H+ S +PS + + S + R SP P A R SP PP Sbjct: 517 RHSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPARRRRSPSPP 558 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,886,534 Number of Sequences: 219361 Number of extensions: 1590648 Number of successful extensions: 7411 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 6490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7349 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
