>Y1836_MYCTU (Q50597) Hypothetical protein Rv1836c/MT1884|
          Length = 677

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +2

Query: 128 WKVDGGEGQTEVERGTAGADVNSSTLPTARSA 223
           W  DG EG+TEV  G     VN    P A +A
Sbjct: 530 WTFDGREGRTEVPAGPLADPVNGQPRPAALTA 561

>PTP99_DROME (P35832) Tyrosine-protein phosphatase 99A precursor (EC 3.1.3.48)|
            (Receptor-linked protein-tyrosine phosphatase 99A)
            (DPTP99A)
          Length = 1301

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 189  TSAPAVPLSTSVWPSPPSTFQLRSYHPS--PHRCAATTASRIS 67
            +S+   P  ++  P PP T QL S+ PS   H+ ++T A+  S
Sbjct: 1126 SSSTTPPTPSTPTPQPPQTIQLSSHSPSDLSHQISSTVANAAS 1168

>ACRO_RAT (P29293) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 437

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 189 TSAPAVPLSTSVWPSPPSTFQLRSYHPSPH 100
           +SAP +PL + + P  P +F L +YH   H
Sbjct: 352 SSAPVIPLLSLLTPVQPVSFTLAAYHTRHH 381

>AROK_AERPE (Q9YEK6) Shikimate kinase (EC 2.7.1.71) (SK)|
          Length = 280

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -3

Query: 145 AAVDLPATELPSE---PSPMRRHDRLKDFDFFFFEATRISTGAAWV 17
           A + +P  E P E   PSP RRH RL D       A R+     W+
Sbjct: 171 AVIGVPGVENPVENLDPSPFRRHSRLYD------AAARLGLAGEWL 210

>K0552_HUMAN (O60299) Protein KIAA0552|
          Length = 673

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
 Frame = +3

Query: 111 DGSSVAGRSTAARAKRRWRGGLQART*THRRCR-RQGLPLLTILRHPAWHRTRTVKNSEH 287
           DG + AG  +  RA RR  G LQA     RR R RQG       R     + + ++  + 
Sbjct: 559 DGEAEAGGESGTRALRREVGRLQAELAAERRARERQGASFAEERRVWLEEKEKVIEYQKQ 618

Query: 288 ADPSN-QVSQALQKVEGEWSECARGASDTAGSSDP 389
              S  ++ Q  Q++E    E  RGA+  A +  P
Sbjct: 619 LQLSYVEMYQRNQQLERRLRE--RGAAGGASTPTP 651

>HXD12_MOUSE (P23812) Homeobox protein Hox-D12 (Hox-4.7) (Hox-5.6)|
          Length = 279

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +1

Query: 208 DGKVCPCSPYSGTPRG 255
           DGK CPCSP  G P G
Sbjct: 189 DGKQCPCSPKPGLPWG 204

>XRN1_SCHPO (P40383) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Exonuclease 2)|
            (Exonuclease II) (Exo II) (p140)
          Length = 1328

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
 Frame = -1

Query: 225  RADLAVGSVDEFTSAPAVPLSTSVWPSPP-----STFQLRSYHPSP 103
            + +++  +V + T +  V   TS +PSPP     S +  R +HP P
Sbjct: 1216 KTNVSANNVSQGTDSRLVTKPTSTFPSPPSPPSSSVWNKREHHPKP 1261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,367,187
Number of Sequences: 219361
Number of extensions: 1351536
Number of successful extensions: 4416
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4415
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)