>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 105/131 (80%)
 Strand = Plus / Plus

                                                                           
Query: 87      gcggccgagcgccacctctctccgcgccgccggggaggccaccgacgccgtcggggagct 146
               ||||||||||||| || | |||||||||||  | |||||| | || ||||||| ||  ||
Sbjct: 3359837 gcggccgagcgccgccgcactccgcgccgcgagcgaggccgcggatgccgtcgcgggcct 3359896

                                                                           
Query: 147     catcaagagcgtgcctccgcagcaggcggcgccggaggctgcctcggggttcgtgaggga 206
               | |||||||  | ||  ||||||||||| | |  ||||||| | | ||||||||||||||
Sbjct: 3359897 cgtcaagaggatcccgacgcagcaggcgactcacgaggctgtcgctgggttcgtgaggga 3359956

                          
Query: 207     cctgggcctcg 217
               |||||| ||||
Sbjct: 3359957 cctggggctcg 3359967

>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
           insert sequence
          Length = 4125

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 105/131 (80%)
 Strand = Plus / Plus

                                                                       
Query: 87  gcggccgagcgccacctctctccgcgccgccggggaggccaccgacgccgtcggggagct 146
           ||||||||||||| || | |||||||||||  | |||||| | || ||||||| ||  ||
Sbjct: 157 gcggccgagcgccgccgcactccgcgccgcgagcgaggccgcggatgccgtcgcgggcct 216

                                                                       
Query: 147 catcaagagcgtgcctccgcagcaggcggcgccggaggctgcctcggggttcgtgaggga 206
           | |||||||  | ||  ||||||||||| | |  ||||||| | | ||||||||||||||
Sbjct: 217 cgtcaagaggatcccgacgcagcaggcgactcacgaggctgtcgctgggttcgtgaggga 276

                      
Query: 207 cctgggcctcg 217
           |||||| ||||
Sbjct: 277 cctggggctcg 287

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 105/131 (80%)
 Strand = Plus / Plus

                                                                           
Query: 87      gcggccgagcgccacctctctccgcgccgccggggaggccaccgacgccgtcggggagct 146
               ||||||||||||| || | |||||||||||  | |||||| | || ||||||| ||  ||
Sbjct: 3359782 gcggccgagcgccgccgcactccgcgccgcgagcgaggccgcggatgccgtcgcgggcct 3359841

                                                                           
Query: 147     catcaagagcgtgcctccgcagcaggcggcgccggaggctgcctcggggttcgtgaggga 206
               | |||||||  | ||  ||||||||||| | |  ||||||| | | ||||||||||||||
Sbjct: 3359842 cgtcaagaggatcccgacgcagcaggcgactcacgaggctgtcgctgggttcgtgaggga 3359901

                          
Query: 207     cctgggcctcg 217
               |||||| ||||
Sbjct: 3359902 cctggggctcg 3359912

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 105/131 (80%)
 Strand = Plus / Plus

                                                                         
Query: 87    gcggccgagcgccacctctctccgcgccgccggggaggccaccgacgccgtcggggagct 146
             ||||||||||||| || | |||||||||||  | |||||| | || ||||||| ||  ||
Sbjct: 38890 gcggccgagcgccgccgcactccgcgccgcgagcgaggccgcggatgccgtcgcgggcct 38949

                                                                         
Query: 147   catcaagagcgtgcctccgcagcaggcggcgccggaggctgcctcggggttcgtgaggga 206
             | |||||||  | ||  ||||||||||| | |  ||||||| | | ||||||||||||||
Sbjct: 38950 cgtcaagaggatcccgacgcagcaggcgactcacgaggctgtcgctgggttcgtgaggga 39009

                        
Query: 207   cctgggcctcg 217
             |||||| ||||
Sbjct: 39010 cctggggctcg 39020

>gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of the complete genome
          Length = 12174

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   ggaggccaccgacgccgtcgggga 143
             |||||||| |||||||||||||||
Sbjct: 11083 ggaggccagcgacgccgtcgggga 11106

>ref|XM_475108.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 128 ccgacgccgtcggggagctc 147
           ||||||||||||||||||||
Sbjct: 561 ccgacgccgtcggggagctc 542

>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence
          Length = 173430

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    cgcaatggtctccgccgagt 46
             ||||||||||||||||||||
Sbjct: 82072 cgcaatggtctccgccgagt 82091

>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
             complete sequence
          Length = 148373

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   ccgacgccgtcggggagctc 147
             ||||||||||||||||||||
Sbjct: 47351 ccgacgccgtcggggagctc 47332

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 15      gaccatcgaagccgcaatggtctc 38
               |||||||||||||||| |||||||
Sbjct: 4204814 gaccatcgaagccgcagtggtctc 4204791

>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ccgacgccgtcggggagctc 147
             ||||||||||||||||||||
Sbjct: 70411 ccgacgccgtcggggagctc 70430

>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 111    cgccgccggggaggccaccgacgccgtc 138
              ||||| ||| ||||||||||||||||||
Sbjct: 126207 cgccgacggcgaggccaccgacgccgtc 126234

>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   ccgacgccgtcggggagctc 147
             ||||||||||||||||||||
Sbjct: 61259 ccgacgccgtcggggagctc 61240

>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence
          Length = 144359

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   ccgacgccgtcggggagctc 147
             ||||||||||||||||||||
Sbjct: 45486 ccgacgccgtcggggagctc 45467

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 128      ccgacgccgtcggggagctc 147
                ||||||||||||||||||||
Sbjct: 19915603 ccgacgccgtcggggagctc 19915622

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     ccgacgccgtcggggagctc 147
               ||||||||||||||||||||
Sbjct: 3612645 ccgacgccgtcggggagctc 3612626

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 128      ccgacgccgtcggggagctc 147
                ||||||||||||||||||||
Sbjct: 17053984 ccgacgccgtcggggagctc 17053965

>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 95    gcgccacctctctccgcgccgccggggaggcc 126
             |||||||||| |||| ||||||||||||||||
Sbjct: 10012 gcgccacctc-ctccacgccgccggggaggcc 9982

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     ccgacgccgtcggggagctc 147
               ||||||||||||||||||||
Sbjct: 3612566 ccgacgccgtcggggagctc 3612547


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,231,651
Number of Sequences: 3902068
Number of extensions: 1231651
Number of successful extensions: 88795
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88255
Number of HSP's gapped (non-prelim): 537
length of query: 217
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 195
effective length of database: 17,147,199,772
effective search space: 3343703955540
effective search space used: 3343703955540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)