ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl16a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 pr... 30 1.9
2CAP_CHLVR (P40122) Adenylyl cyclase-associated protein (CAP) 28 5.6
3IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot... 28 7.3
4RL24_METJA (P54038) 50S ribosomal protein L24P 27 9.5

>CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 protein)|
          Length = 333

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 15  NTTADPQGFNPEQRKREPTERAAQAARPHSPP 110
           NTT  P G+ P+Q++R PT    Q     +PP
Sbjct: 43  NTTQTPGGYPPQQQQRPPTGAPQQPGGYPTPP 74



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>CAP_CHLVR (P40122) Adenylyl cyclase-associated protein (CAP)|
          Length = 481

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 42  NPEQRKREPTERAAQAARPHSPPHL 116
           NPE R + P + +A   RP++PP+L
Sbjct: 285 NPELRNQPPLKSSALDPRPYTPPNL 309



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>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 42  NPEQRKREPTERAAQAARPHSPP 110
           +P  R+R P++  + + RPH PP
Sbjct: 624 SPASRERRPSKSPSSSPRPHDPP 646



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>RL24_METJA (P54038) 50S ribosomal protein L24P|
          Length = 120

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 281 SFTPSKRHAKERNAAFHAPSHM 346
           +FT SK+  K+R A F+AP H+
Sbjct: 2   AFTKSKQPRKQRKALFNAPLHL 23


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.130    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,897,655
Number of Sequences: 219361
Number of extensions: 189518
Number of successful extensions: 655
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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