Clone Name | bastl16a10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 pr... | 30 | 1.9 | 2 | CAP_CHLVR (P40122) Adenylyl cyclase-associated protein (CAP) | 28 | 5.6 | 3 | IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot... | 28 | 7.3 | 4 | RL24_METJA (P54038) 50S ribosomal protein L24P | 27 | 9.5 |
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>CAP1_DICDI (P19198) cAMP-binding protein CABP1A/CABP1B (CABP1 protein)| Length = 333 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 15 NTTADPQGFNPEQRKREPTERAAQAARPHSPP 110 NTT P G+ P+Q++R PT Q +PP Sbjct: 43 NTTQTPGGYPPQQQQRPPTGAPQQPGGYPTPP 74
>CAP_CHLVR (P40122) Adenylyl cyclase-associated protein (CAP)| Length = 481 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +3 Query: 42 NPEQRKREPTERAAQAARPHSPPHL 116 NPE R + P + +A RP++PP+L Sbjct: 285 NPELRNQPPLKSSALDPRPYTPPNL 309
>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 841 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +3 Query: 42 NPEQRKREPTERAAQAARPHSPP 110 +P R+R P++ + + RPH PP Sbjct: 624 SPASRERRPSKSPSSSPRPHDPP 646
>RL24_METJA (P54038) 50S ribosomal protein L24P| Length = 120 Score = 27.3 bits (59), Expect = 9.5 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 281 SFTPSKRHAKERNAAFHAPSHM 346 +FT SK+ K+R A F+AP H+ Sbjct: 2 AFTKSKQPRKQRKALFNAPLHL 23 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.130 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,897,655 Number of Sequences: 219361 Number of extensions: 189518 Number of successful extensions: 655 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 655 length of database: 80,573,946 effective HSP length: 93 effective length of database: 60,173,373 effective search space used: 1444160952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)