Clone Name | bastl16a03 |
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Clone Library Name | barley_pub |
>dbj|AK111518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H05, full insert sequence Length = 4147 Score = 424 bits (214), Expect = e-116 Identities = 313/346 (90%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||| ||||||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 617 atattctttgagatccgcaaacagaagtatcttgaggcccttgataagcatgatcgttcg 676 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| ||||||||| ||||||||||| ||||||| || || ||||||||||||||| || Sbjct: 677 aaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctttaacgaggagttg 736 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 |||||||||||||||||||| || || |||| ||||| ||||| |||||||| |||||| Sbjct: 737 tttaaggagatcacacagcttttgacgttggaaaactttagggaaaatgagcaactctcc 796 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 || |||||||||||||||||||| |||||||||||||||||||| || |||||||||||| Sbjct: 797 aaatacggtgatacaaaatctgccagagcaataatgcttgttgaactaaagaagctgatt 856 Query: 241 gaagctaatcccttattccgtgacaagcttcagtttcccaatctggagagttctagatta 300 |||||||||||||| ||||||||||||||||||||||| |||||| |||| || ||||| Sbjct: 857 gaagctaatcccttgttccgtgacaagcttcagtttccaaatctgaagagctccagattg 916 Query: 301 cggacacttatcaaccagagcttaaactggcagcaccagctttgca 346 ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 917 cggacacctataaaccagagcttaaactggcagcaccagctttgca 962
>gb|BT018708.1| Zea mays clone EL01N0516A09.d mRNA sequence Length = 1729 Score = 325 bits (164), Expect = 5e-86 Identities = 281/320 (87%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 1133 atattctttgagatccggaagcagaagtatctcgaggctcttgataagcatgatcggtca 1192 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| ||||||||| ||||||||||| | ||||| ||||||||||| || |||||| || Sbjct: 1193 aaggctgttgaaatcttggtcaaggaccttaaggtctttgcatccttcaatgaggagttg 1252 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || || |||||||||||||| |||| ||||||| || ||||| |||||||||||||| Sbjct: 1253 ttcaaagagatcacacagcttctaaccttggagaattttagggaaaatgagcagctctcg 1312 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 1313 aagtatggtgatacaaaatctgcaagacaaataatgcttgctgagctgaagaagctgatt 1372 Query: 241 gaagctaatcccttattccgtgacaagcttcagtttcccaatctggagagttctagatta 300 |||||||||||||| ||||||||||| || || ||||||| ||| ||| || ||| || Sbjct: 1373 gaagctaatcccttgttccgtgacaaactacaatttcccagcctgaagacttttaggttg 1432 Query: 301 cggacacttatcaaccagag 320 ||||||||||| |||||||| Sbjct: 1433 cggacacttattaaccagag 1452
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 8144656 agggaaaatgagcaactctccaaatacggtgatacaaaatctgccagagcaataatgctt 8144597 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcagtttccc 279 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 8144596 gttgaactaaagaagctgattgaagctaatcccttgttccgtgacaagcttcagtttcca 8144537 Query: 280 aatctggagagttctagattacggacacttatcaaccagag 320 |||||| |||| || ||||| ||||||||||| |||||||| Sbjct: 8144536 aatctgaagagctccagattgcggacacttataaaccagag 8144496 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 48 gcatgatcggtccaaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctt 107 ||||||||| || ||||| ||||||||| ||||||||||| ||||||| || || ||||| Sbjct: 8144897 gcatgatcgttcgaaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctt 8144838 Query: 108 taacgaggagctgtttaaggagatcacacagct 140 |||||||||| |||||||||||||||||||||| Sbjct: 8144837 taacgaggagttgtttaaggagatcacacagct 8144805 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataag 48 |||||||| ||||||||||| ||||||||||| |||||||| |||||| Sbjct: 8145032 atattctttgagatccgcaaacagaagtatcttgaggcccttgataag 8144985 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 319 agcttaaactggcagcaccagctttgca 346 |||||||||||||||||||||||||||| Sbjct: 8143808 agcttaaactggcagcaccagctttgca 8143781
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 8142491 agggaaaatgagcaactctccaaatacggtgatacaaaatctgccagagcaataatgctt 8142432 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcagtttccc 279 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 8142431 gttgaactaaagaagctgattgaagctaatcccttgttccgtgacaagcttcagtttcca 8142372 Query: 280 aatctggagagttctagattacggacacttatcaaccagag 320 |||||| |||| || ||||| ||||||||||| |||||||| Sbjct: 8142371 aatctgaagagctccagattgcggacacttataaaccagag 8142331 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 48 gcatgatcggtccaaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctt 107 ||||||||| || ||||| ||||||||| ||||||||||| ||||||| || || ||||| Sbjct: 8142732 gcatgatcgttcgaaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctt 8142673 Query: 108 taacgaggagctgtttaaggagatcacacagct 140 |||||||||| |||||||||||||||||||||| Sbjct: 8142672 taacgaggagttgtttaaggagatcacacagct 8142640 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataag 48 |||||||| ||||||||||| ||||||||||| |||||||| |||||| Sbjct: 8142867 atattctttgagatccgcaaacagaagtatcttgaggcccttgataag 8142820 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 319 agcttaaactggcagcaccagctttgca 346 |||||||||||||||||||||||||||| Sbjct: 8141643 agcttaaactggcagcaccagctttgca 8141616
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 216 bits (109), Expect = 4e-53 Identities = 148/161 (91%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 76086 agggaaaatgagcaactctccaaatacggtgatacaaaatctgccagagcaataatgctt 76027 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcagtttccc 279 ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 76026 gttgaactaaagaagctgattgaagctaatcccttgttccgtgacaagcttcagtttcca 75967 Query: 280 aatctggagagttctagattacggacacttatcaaccagag 320 |||||| |||| || ||||| ||||||||||| |||||||| Sbjct: 75966 aatctgaagagctccagattgcggacacttataaaccagag 75926 Score = 113 bits (57), Expect = 4e-22 Identities = 84/93 (90%) Strand = Plus / Minus Query: 48 gcatgatcggtccaaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctt 107 ||||||||| || ||||| ||||||||| ||||||||||| ||||||| || || ||||| Sbjct: 76327 gcatgatcgttcgaaggcggttgaaatcttggtcaaggacctgaaggtcttcgcgtcctt 76268 Query: 108 taacgaggagctgtttaaggagatcacacagct 140 |||||||||| |||||||||||||||||||||| Sbjct: 76267 taacgaggagttgtttaaggagatcacacagct 76235 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataag 48 |||||||| ||||||||||| ||||||||||| |||||||| |||||| Sbjct: 76462 atattctttgagatccgcaaacagaagtatcttgaggcccttgataag 76415 Score = 56.0 bits (28), Expect = 8e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 319 agcttaaactggcagcaccagctttgca 346 |||||||||||||||||||||||||||| Sbjct: 75238 agcttaaactggcagcaccagctttgca 75211
>ref|NM_101443.2| Arabidopsis thaliana unknown protein AT1G15750 transcript variant AT1G15750.1 mRNA, complete cds Length = 4281 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 378 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 437 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 438 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 497 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 498 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 557 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 558 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 617 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 618 gaggcgaatcctttattccgtga 640 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 687 atcaaccagagcttaaattggcaacaccagctttg 721
>ref|NM_001035973.1| Arabidopsis thaliana unknown protein AT1G15750 transcript variant AT1G15750.3 mRNA, complete cds Length = 4554 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 651 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 710 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 711 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 770 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 771 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 830 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 831 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 890 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 891 gaggcgaatcctttattccgtga 913 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 960 atcaaccagagcttaaattggcaacaccagctttg 994
>ref|NM_179341.1| Arabidopsis thaliana unknown protein AT1G15750 transcript variant AT1G15750.2 mRNA, complete cds Length = 4252 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 349 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 408 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 409 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 468 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 469 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 528 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 529 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 588 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 589 gaggcgaatcctttattccgtga 611 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 658 atcaaccagagcttaaattggcaacaccagctttg 692
>ref|NM_001035974.1| Arabidopsis thaliana unknown protein AT1G15750 transcript variant AT1G15750.4 mRNA, complete cds Length = 4266 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 363 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 422 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 423 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 482 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 483 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 542 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 543 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 602 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 603 gaggcgaatcctttattccgtga 625 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 672 atcaaccagagcttaaattggcaacaccagctttg 706
>gb|AY142619.1| Arabidopsis thaliana unknown protein (At1g15750) mRNA, complete cds Length = 3427 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 214 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 273 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 274 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 333 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 334 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 393 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 394 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 453 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 454 gaggcgaatcctttattccgtga 476 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 523 atcaaccagagcttaaattggcaacaccagctttg 557
>gb|AY046013.1| Arabidopsis thaliana unknown protein (At1g15750) mRNA, complete cds Length = 3735 Score = 141 bits (71), Expect = 2e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 |||||||||||||| | |||||||||||||||||||| | |||||||||||||| || Sbjct: 378 atattcttcgagataagaaagcagaagtatctcgaggctttggataagcatgatcgtccc 437 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| ||||| |||||| || | ||||| |||||||| Sbjct: 438 aaggctgtggatatactagtgaaggatttgaaagtgttttcaacttttaatgaggagctt 497 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || ||||| || |||||||| || || ||||||||||| |||||||||| ||| | ||| Sbjct: 498 ttcaaggaaataacacagctcttgacattggagaacttccgggagaatgaacagttatcc 557 Query: 181 aagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgatt 240 ||||| || || || || ||||||||||| || ||| | || || || || ||||||||| Sbjct: 558 aagtatggggacaccaagtctgcaagagcgatcatgttggtggaactcaaaaagctgatt 617 Query: 241 gaagctaatcccttattccgtga 263 || || ||||| ||||||||||| Sbjct: 618 gaggcgaatcctttattccgtga 640 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 ||||||||||||||||| ||||| ||||||||||| Sbjct: 687 atcaaccagagcttaaattggcaacaccagctttg 721
>ref|NM_106697.3| Arabidopsis thaliana unknown protein AT1G80490 transcript variant AT1G80490.1 mRNA, complete cds Length = 3755 Score = 119 bits (60), Expect = 6e-24 Identities = 210/260 (80%) Strand = Plus / Plus Query: 4 ttcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtccaag 63 ||||||||||| | ||||||||||||||||||||| | |||| ||||||||| ||||| Sbjct: 418 ttcttcgagattaggaagcagaagtatctcgaggccttggataggcatgatcgtcccaag 477 Query: 64 gcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctgttt 123 || || || || | ||||| || ||||| |||||| | | ||||| |||||||| || Sbjct: 478 gctgtcgatattttagtcaaagatttgaaagtgttttccacttttaatgaggagcttttc 537 Query: 124 aaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctccaag 183 ||||| ||||| ||||| || || | || |||||||||||||| |||||| | |||||| Sbjct: 538 aaggaaatcactcagctcttgaccttagaaaacttcagggagaacgagcagttatccaag 597 Query: 184 tacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgattgaa 243 || || || ||||| || || ||||| || ||| | || || || |||||| |||||||| Sbjct: 598 tatggggacacaaagtccgccagagctatcatgttggtggaactcaagaagttgattgaa 657 Query: 244 gctaatcccttattccgtga 263 |||||||| ||||||||||| Sbjct: 658 gctaatcctttattccgtga 677 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 cagagcttaaactggcagcaccagctttg 344 ||||||||||| ||||| ||||||||||| Sbjct: 730 cagagcttaaattggcaacaccagctttg 758
>ref|NM_179582.2| Arabidopsis thaliana unknown protein AT1G80490 transcript variant AT1G80490.2 mRNA, complete cds Length = 3787 Score = 119 bits (60), Expect = 6e-24 Identities = 210/260 (80%) Strand = Plus / Plus Query: 4 ttcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtccaag 63 ||||||||||| | ||||||||||||||||||||| | |||| ||||||||| ||||| Sbjct: 450 ttcttcgagattaggaagcagaagtatctcgaggccttggataggcatgatcgtcccaag 509 Query: 64 gcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctgttt 123 || || || || | ||||| || ||||| |||||| | | ||||| |||||||| || Sbjct: 510 gctgtcgatattttagtcaaagatttgaaagtgttttccacttttaatgaggagcttttc 569 Query: 124 aaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctccaag 183 ||||| ||||| ||||| || || | || |||||||||||||| |||||| | |||||| Sbjct: 570 aaggaaatcactcagctcttgaccttagaaaacttcagggagaacgagcagttatccaag 629 Query: 184 tacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaagaagctgattgaa 243 || || || ||||| || || ||||| || ||| | || || || |||||| |||||||| Sbjct: 630 tatggggacacaaagtccgccagagctatcatgttggtggaactcaagaagttgattgaa 689 Query: 244 gctaatcccttattccgtga 263 |||||||| ||||||||||| Sbjct: 690 gctaatcctttattccgtga 709 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 316 cagagcttaaactggcagcaccagctttg 344 ||||||||||| ||||| ||||||||||| Sbjct: 762 cagagcttaaattggcaacaccagctttg 790
>ref|XM_480212.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3453 Score = 105 bits (53), Expect = 9e-20 Identities = 152/185 (82%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 ||||||||||||||||| ||||||||||| ||||| ||||| || | ||||||||| || Sbjct: 214 atattcttcgagatccggaagcagaagtacctcgaagcccttgacaggcatgatcgagcc 273 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| | ||||||||||| || || || ||||||||| Sbjct: 274 aaggcggtggagatactcgtgaaggatctcaaggtgtttgcctcattcaatgaggagctg 333 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || |||||||| |||||||| | || ||||||| || ||| | ||||||||||| ||| Sbjct: 334 ttcaaggagataacacagctgctgacgttggagaattttaggcaaaatgagcagctgtcc 393 Query: 181 aagta 185 ||||| Sbjct: 394 aagta 398
>dbj|AK111830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123A16, full insert sequence Length = 4466 Score = 97.6 bits (49), Expect = 2e-17 Identities = 151/185 (81%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccctcgataagcatgatcggtcc 60 ||||||||||||||||| ||||||||||| ||||| ||||| || | ||||||||| || Sbjct: 771 atattcttcgagatccggaagcagaagtacctcgaagcccttgacaggcatgatcgagcc 830 Query: 61 aaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctttaacgaggagctg 120 ||||| || || || || || ||||| | ||||||||||| || || || ||||||||| Sbjct: 831 aaggcggtggagatactcgtgaaggatctcaaggtgtttgcctcattcaatgaggagctg 890 Query: 121 tttaaggagatcacacagctattaactctggagaacttcagggagaatgagcagctctcc 180 || |||||||| |||||||| | | ||||||| || ||| | ||||||||||| ||| Sbjct: 891 ttcaaggagataacacagctgctgatgttggagaattttaggcaaaatgagcagctgtcc 950 Query: 181 aagta 185 ||||| Sbjct: 951 aagta 955
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 83.8 bits (42), Expect = 3e-13 Identities = 129/158 (81%) Strand = Plus / Minus Query: 106 tttaacgaggagctgtttaaggagatcacacagctattaactctggagaacttcagggag 165 ||||| |||||||| || ||||| ||||| ||||| || || | || |||||||||||| Sbjct: 93494 tttaatgaggagcttttcaaggaaatcactcagctcttgaccttagaaaacttcagggag 93435 Query: 166 aatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgcttgttgag 225 || |||||| | |||||||| || || ||||| || || ||||| || ||| | || || Sbjct: 93434 aacgagcagttatccaagtatggggacacaaagtccgccagagctatcatgttggtggaa 93375 Query: 226 ctgaagaagctgattgaagctaatcccttattccgtga 263 || |||||| |||||||||||||||| ||||||||||| Sbjct: 93374 ctcaagaagttgattgaagctaatcctttattccgtga 93337 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Minus Query: 4 ttcttcgagatccgcaagcagaagtatctcgaggcc 39 ||||||||||| | ||||||||||||||||||||| Sbjct: 93678 ttcttcgagattaggaagcagaagtatctcgaggcc 93643
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 83.8 bits (42), Expect = 3e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 106 tttaacgaggagctgtttaaggagatcacacagctattaactctggagaacttcagggag 165 ||||| |||||||| || ||||| ||||| ||||| || || | || |||||||||||| Sbjct: 52656 tttaatgaggagcttttcaaggaaatcactcagctcttgaccttagaaaacttcagggag 52715 Query: 166 aatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgcttgttgag 225 || |||||| | |||||||| || || ||||| || || ||||| || ||| | || || Sbjct: 52716 aacgagcagttatccaagtatggggacacaaagtccgccagagctatcatgttggtggaa 52775 Query: 226 ctgaagaagctgattgaagctaatcccttattccgtga 263 || |||||| |||||||||||||||| ||||||||||| Sbjct: 52776 ctcaagaagttgattgaagctaatcctttattccgtga 52813 Score = 48.1 bits (24), Expect = 0.019 Identities = 33/36 (91%) Strand = Plus / Plus Query: 4 ttcttcgagatccgcaagcagaagtatctcgaggcc 39 ||||||||||| | ||||||||||||||||||||| Sbjct: 52472 ttcttcgagattaggaagcagaagtatctcgaggcc 52507
>ref|NM_180672.2| Arabidopsis thaliana unknown protein AT3G15880 transcript variant AT3G15880.1 mRNA, complete cds Length = 3742 Score = 75.8 bits (38), Expect = 8e-11 Identities = 119/146 (81%) Strand = Plus / Plus Query: 154 aacttcagggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaata 213 ||||||||||| ||||||||||| |||||||| || ||||| || || ||||||| || Sbjct: 555 aacttcagggaaaatgagcagctttccaagtatggagatactaagtccgcaagaggtatc 614 Query: 214 atgcttgttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcag 273 ||||||| || || || || ||||||||||| ||||| | ||||| ||||| ||||| Sbjct: 615 atgcttggggaacttaaaaaactgattgaagcaaatcctctcttccgagacaaacttcaa 674 Query: 274 tttcccaatctggagagttctagatt 299 ||||||| | || ||| ||||||||| Sbjct: 675 tttcccagtttgaagaattctagatt 700
>ref|NM_112458.5| Arabidopsis thaliana unknown protein AT3G15880 transcript variant AT3G15880.2 mRNA, complete cds Length = 3975 Score = 75.8 bits (38), Expect = 8e-11 Identities = 119/146 (81%) Strand = Plus / Plus Query: 154 aacttcagggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaata 213 ||||||||||| ||||||||||| |||||||| || ||||| || || ||||||| || Sbjct: 555 aacttcagggaaaatgagcagctttccaagtatggagatactaagtccgcaagaggtatc 614 Query: 214 atgcttgttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcag 273 ||||||| || || || || ||||||||||| ||||| | ||||| ||||| ||||| Sbjct: 615 atgcttggggaacttaaaaaactgattgaagcaaatcctctcttccgagacaaacttcaa 674 Query: 274 tttcccaatctggagagttctagatt 299 ||||||| | || ||| ||||||||| Sbjct: 675 tttcccagtttgaagaattctagatt 700
>gb|AY039963.1| Arabidopsis thaliana At3g15880 mRNA sequence Length = 3730 Score = 75.8 bits (38), Expect = 8e-11 Identities = 119/146 (81%) Strand = Plus / Plus Query: 154 aacttcagggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaata 213 ||||||||||| ||||||||||| |||||||| || ||||| || || ||||||| || Sbjct: 514 aacttcagggaaaatgagcagctttccaagtatggagatactaagtccgcaagaggtatc 573 Query: 214 atgcttgttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcag 273 ||||||| || || || || ||||||||||| ||||| | ||||| ||||| ||||| Sbjct: 574 atgcttggggaacttaaaaaactgattgaagcaaatcctctcttccgagacaaacttcaa 633 Query: 274 tttcccaatctggagagttctagatt 299 ||||||| | || ||| ||||||||| Sbjct: 634 tttcccagtttgaagaattctagatt 659
>gb|AF506028.1| Poncirus trifoliata citrus tristeza virus resistance gene locus, complete sequence Length = 282699 Score = 71.9 bits (36), Expect = 1e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 |||||||||||||| | || ||||| || || ||||| ||||||||| |||| ||| | Sbjct: 14683 agggagaatgagcaattgtctaagtatggagacacaaagtctgcaagatcaatcatgttg 14624 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtga 263 |||||||| |||||||| |||||||| || |||||||| ||||| Sbjct: 14623 gttgagctcaagaagcttattgaagccaaccccttatttcgtga 14580
>ref|NM_112557.3| Arabidopsis thaliana unknown protein AT3G16830 mRNA, complete cds Length = 3812 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 106 tttaacgaggagctgtttaaggagatcacacagctattaactctggagaacttcagggag 165 |||||||||||||| | |||||||| || ||||| | ||||||||||| || ||||| Sbjct: 494 tttaacgaggagctttacaaggagattactcagctgcttactctggagaattttagggaa 553 Query: 166 aatgagcagctctccaagtacggtgatacaaaatctgcaag 206 |||||||| || || || || |||||||| ||||||||||| Sbjct: 554 aatgagcaactgtcgaaatatggtgatactaaatctgcaag 594 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagct 341 ||||| || ||||||||||||||||| ||||| Sbjct: 698 atcaatcaaagcttaaactggcagcatcagct 729
>gb|AY074277.1| Arabidopsis thaliana At3g16830 mRNA sequence Length = 3792 Score = 65.9 bits (33), Expect = 8e-08 Identities = 84/101 (83%) Strand = Plus / Plus Query: 106 tttaacgaggagctgtttaaggagatcacacagctattaactctggagaacttcagggag 165 |||||||||||||| | |||||||| || ||||| | ||||||||||| || ||||| Sbjct: 494 tttaacgaggagctttacaaggagattactcagctgcttactctggagaattttagggaa 553 Query: 166 aatgagcagctctccaagtacggtgatacaaaatctgcaag 206 |||||||| || || || || |||||||| ||||||||||| Sbjct: 554 aatgagcaactgtcgaaatatggtgatactaaatctgcaag 594 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagct 341 ||||| || ||||||||||||||||| ||||| Sbjct: 698 atcaatcaaagcttaaactggcagcatcagct 729
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 63.9 bits (32), Expect = 3e-07 Identities = 113/140 (80%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||| ||||||||||| |||||||| || ||||| || || ||||||| || |||||| Sbjct: 80478 agggaaaatgagcagctttccaagtatggagatactaagtccgcaagaggtatcatgctt 80419 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtgacaagcttcagtttccc 279 | || || || || ||||||||||| ||||| | ||||| ||||| ||||| |||||| Sbjct: 80418 ggggaacttaaaaaactgattgaagcaaatcctctcttccgagacaaacttcaatttccc 80359 Query: 280 aatctggagagttctagatt 299 | | || ||| ||||||||| Sbjct: 80358 agtttgaagaattctagatt 80339
>gb|AC148304.3| Medicago truncatula clone mth2-21b19, complete sequence Length = 110520 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||| ||||| ||| | || ||||| |||||||| || ||||| | ||||| ||| | Sbjct: 56420 agggaaaatgaacagttgtcaaagtatggtgatactaagtctgcgcgggcaatcatgttg 56479 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtgacaa 266 |||||||| || ||||| |||||||||||||| ||||| |||||||| Sbjct: 56480 gttgagcttaaaaagctcattgaagctaatccgttatttcgtgacaa 56526
>gb|AC152423.17| Medicago truncatula clone mth2-31c9, complete sequence Length = 112783 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 172 cagctctccaagtacggtgatacaaaatctgcaagagcaataatgcttgttgagctgaag 231 ||||| || ||||| || ||||| ||||| || |||| ||||||||||| ||| |||||| Sbjct: 3696 cagctatctaagtatggggatactaaatccgcgagaggaataatgcttgctgaactgaag 3637 Query: 232 aagctgattgaagctaa 248 || || ||||||||||| Sbjct: 3636 aaactaattgaagctaa 3620
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccct 41 ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 3661627 atattcttcgagatccggaagcagaagtacctcgaagccct 3661667 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 91 aaggtgtttgcatcctttaacgaggagctgtttaaggagatcacacagct 140 ||||||||||| || || || ||||||||||| |||||||| |||||||| Sbjct: 3661800 aaggtgtttgcctcattcaatgaggagctgttcaaggagataacacagct 3661849
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggccct 41 ||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 140133 atattcttcgagatccggaagcagaagtacctcgaagccct 140173 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 91 aaggtgtttgcatcctttaacgaggagctgtttaaggagatcacacagct 140 ||||||||||| || || || ||||||||||| |||||||| |||||||| Sbjct: 140306 aaggtgtttgcctcattcaatgaggagctgttcaaggagataacacagct 140355
>gb|AC034256.3|F7H2 Sequence of BAC F7H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 77521 Score = 56.0 bits (28), Expect = 8e-05 Identities = 85/104 (81%) Strand = Plus / Minus Query: 160 agggagaatgagcagctctccaagtacggtgatacaaaatctgcaagagcaataatgctt 219 ||||||||||| ||| | |||||||| || || || || ||||||||||| || ||| | Sbjct: 32245 agggagaatgaacagttatccaagtatggggacaccaagtctgcaagagcgatcatgttg 32186 Query: 220 gttgagctgaagaagctgattgaagctaatcccttattccgtga 263 || || || || ||||||||||| || ||||| ||||||||||| Sbjct: 32185 gtggaactcaaaaagctgattgaggcgaatcctttattccgtga 32142 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1 atattcttcgagatccgcaagcagaagtatctcgaggc 38 |||||||||||||| | |||||||||||||||||||| Sbjct: 32619 atattcttcgagataagaaagcagaagtatctcgaggc 32582 Score = 48.1 bits (24), Expect = 0.019 Identities = 90/112 (80%) Strand = Plus / Minus Query: 48 gcatgatcggtccaaggcagttgaaatcctggtcaaggacttgaaggtgtttgcatcctt 107 ||||||||| ||||||| || || || || || ||||| ||||| |||||| || | || Sbjct: 32468 gcatgatcgtcccaaggctgtggatatactagtgaaggatttgaaagtgttttcaacttt 32409 Query: 108 taacgaggagctgtttaaggagatcacacagctattaactctggagaacttc 159 ||| |||||||| || ||||| || |||||||| || || ||||||||||| Sbjct: 32408 taatgaggagcttttcaaggaaataacacagctcttgacattggagaacttc 32357
>ref|NM_187885.1| Oryza sativa (japonica cultivar-group), Ozsa8327 predicted mRNA Length = 2793 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 |||||||| ||||| ||||||||||| |||||||| Sbjct: 523 atcaaccaaagcttgaactggcagcatcagctttg 557
>dbj|AK111762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061P18, full insert sequence Length = 4125 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 |||||||| ||||| ||||||||||| |||||||| Sbjct: 799 atcaaccaaagcttgaactggcagcatcagctttg 833
>dbj|AK111583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090J18, full insert sequence Length = 3237 Score = 46.1 bits (23), Expect = 0.074 Identities = 32/35 (91%) Strand = Plus / Plus Query: 310 atcaaccagagcttaaactggcagcaccagctttg 344 |||||||| ||||| ||||||||||| |||||||| Sbjct: 671 atcaaccaaagcttgaactggcagcatcagctttg 705
>gb|AC017005.7| Homo sapiens BAC clone RP11-100J21 from Y, complete sequence Length = 94921 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tacaaaatctgcaagagcaat 212 ||||||||||||||||||||| Sbjct: 54610 tacaaaatctgcaagagcaat 54590
>gb|AC144513.22| Medicago truncatula clone mth2-15d23, complete sequence Length = 112032 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 159 cagggagaatgagcagctctccaagtacggtga 191 |||||||||||||||||| || ||||| ||||| Sbjct: 18837 cagggagaatgagcagctgtctaagtatggtga 18805
>emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 on chromosome 22, complete sequence Length = 135259 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 tgacaagcttcagtttcccaatctg 285 |||||||| |||||||||||||||| Sbjct: 9657 tgacaagcctcagtttcccaatctg 9681
>gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, complete sequence Length = 162351 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aaggagatcacacagctatta 144 ||||||||||||||||||||| Sbjct: 76517 aaggagatcacacagctatta 76497
>gb|AC113348.2| Homo sapiens chromosome 5 clone CTD-2537M22, complete sequence Length = 80723 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ggcagttgaaatcctggtcaa 83 ||||||||||||||||||||| Sbjct: 28629 ggcagttgaaatcctggtcaa 28609
>gb|AC073649.3|AC073649 Homo sapiens clone RP11-823D8, complete sequence Length = 120951 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 tacaaaatctgcaagagcaat 212 ||||||||||||||||||||| Sbjct: 24125 tacaaaatctgcaagagcaat 24145
>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2 (P1-P2-P3-IR2@) on chromosome Y Length = 4538292 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 tacaaaatctgcaagagcaat 212 ||||||||||||||||||||| Sbjct: 4036784 tacaaaatctgcaagagcaat 4036764 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 tacaaaatctgcaagagcaat 212 ||||||||||||||||||||| Sbjct: 2011537 tacaaaatctgcaagagcaat 2011557
>gb|BC081793.1| Rattus norvegicus CDK5 regulatory subunit associated protein 3, mRNA (cDNA clone MGC:93406 IMAGE:7190258), complete cds Length = 1803 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1444 gagctgcagaagctgattgaagct 1467
>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence Length = 203498 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 45890 tctggagaacttcagggaga 45871
>gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete sequence Length = 159930 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 126571 tctggagaacttcagggaga 126590
>ref|NM_122585.3| Arabidopsis thaliana unknown protein AT5G27030 mRNA, complete cds Length = 3618 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagcagaagtatctcgaggc 38 |||||||||||||||||||| Sbjct: 365 aagcagaagtatctcgaggc 384
>ref|XM_514562.1| PREDICTED: Pan troglodytes similar to CDK5 regulatory subunit associated protein 3 isoform b; ischemic heart CDK5 activator-binding protein C53; CDK5 activator-binding protein C53 (LOC458152), mRNA Length = 1016 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 797 gagctgcagaagctgattgaagct 820
>gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete sequence Length = 162638 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 28470 tctggagaacttcagggaga 28489
>gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, complete sequence Length = 169980 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtcaaggacttgaaggtgtttgca 102 |||||||| ||||||||||||||| Sbjct: 89313 gtcaaggagttgaaggtgtttgca 89290
>gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete sequence Length = 170675 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 69215 tctggagaacttcagggaga 69234
>gb|AC009739.4| Drosophila melanogaster clone BACR26B18, complete sequence Length = 173641 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 21034 tctggagaacttcagggaga 21015
>gb|AC008211.10| Drosophila melanogaster clone BACR08N16, complete sequence Length = 181904 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 75449 tctggagaacttcagggaga 75468
>gb|AC093104.2| Drosophila melanogaster clone BACR38O04, complete sequence Length = 167107 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 131014 tctggagaacttcagggaga 131033
>gb|AC092189.3| Drosophila melanogaster clone BACR34M11, complete sequence Length = 168540 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 151889 tctggagaacttcagggaga 151908
>gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete sequence Length = 171772 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 9159 tctggagaacttcagggaga 9178
>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence Length = 186286 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 63441 tctggagaacttcagggaga 63460
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 36747 tctggagaacttcagggaga 36766
>gb|AC012164.12| Drosophila melanogaster clone BACR14D22, complete sequence Length = 169385 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 74670 tctggagaacttcagggaga 74651
>ref|XM_586181.2| PREDICTED: Bos taurus similar to CDK5 regulatory subunit associated protein 3 isoform b (LOC509255), partial mRNA Length = 1872 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1622 gagctgcagaagctgattgaagct 1645
>gb|BC072435.1| Homo sapiens CDK5 regulatory subunit associated protein 3, transcript variant 3, mRNA (cDNA clone MGC:87717 IMAGE:5751801), complete cds Length = 1890 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1458 gagctgcagaagctgattgaagct 1481
>ref|NG_005525.2| Homo sapiens CDK5 regulatory subunit associated protein 3 pseudogene (LOC149935) on chromosome 20 Length = 1331 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1163 gagctgcagaagctgattgaagct 1186
>gb|AF161801.5| Homo sapiens chromosome 8 clone GS1-2g21 map p12, complete sequence Length = 138341 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 tacaaaatctgcaagagcaataat 215 ||||||||||| |||||||||||| Sbjct: 24717 tacaaaatctgtaagagcaataat 24740
>gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete sequence Length = 188616 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 ctggagagttctagattacggaca 306 |||| ||||||||||||||||||| Sbjct: 109671 ctggtgagttctagattacggaca 109694
>gb|AC185539.1| Drosophila melanogaster clone BACR22O16, complete sequence Length = 180099 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 66667 tctggagaacttcagggaga 66648
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 138653 tctggagaacttcagggaga 138672
>emb|CR942808.9| Drosophila DNA sequence from clone BACR-5J11, complete sequence Length = 196868 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 87195 tctggagaacttcagggaga 87214
>gb|BC013407.2| Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA (cDNA clone IMAGE:2988445), partial cds Length = 2762 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2356 gagctgcagaagctgattgaagct 2379
>emb|CR942807.3| Drosophila DNA sequence from clone BACR-12I02, complete sequence Length = 177921 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 36678 tctggagaacttcagggaga 36697
>ref|NM_025197.2| Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), transcript variant 2, mRNA Length = 2594 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2235 gagctgcagaagctgattgaagct 2258
>ref|NM_176095.1| Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), transcript variant 1, mRNA Length = 2809 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2450 gagctgcagaagctgattgaagct 2473
>ref|NM_176096.1| Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), transcript variant 3, mRNA Length = 1884 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1525 gagctgcagaagctgattgaagct 1548
>gb|AY303171.1| Solanum bulbocastanum chromosome 8 clone 177O13, complete sequence Length = 163635 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 164 agaatgagcagctctccaagtacggtgatacaaaatctgcaaga 207 |||| |||||||||||||| || || |||||||| || |||||| Sbjct: 33800 agaacgagcagctctccaaatatggggatacaaagtcggcaaga 33843
>emb|AL162259.12| Human DNA sequence from clone RP3-405J11 on chromosome 1p34.1-34.3, complete sequence Length = 66118 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 caagcttcagtttcccaatctgga 287 ||||| |||||||||||||||||| Sbjct: 58717 caagcctcagtttcccaatctgga 58694
>emb|AL160008.3| Human DNA sequence from clone RP5-837D10 on chromosome 1p22.2-31.1 Contains the 5' end of the GBP3 gene for guanylate binding protein 3 and the GBP1 gene for 67kDa interferon-inducible guanylate binding protein 1, complete sequence Length = 85671 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcagtttcccaatctggaga 289 |||||||||||||||||||| Sbjct: 73921 tcagtttcccaatctggaga 73902
>emb|AL136131.15| Human DNA sequence from clone RP1-261G23 on chromosome 6p12.2-21.1 Contains the KIAA0110 gene, the FLJ30845 gene, the MRPS18A gene for mitochondrial ribosomal protein S18A, a pseudogene similar to OPA-interacting protein (OIP21) a novel gene, the VEGF gene for vascular endothelial growth factor and two CpG islands, complete sequence Length = 172033 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 caagcttcagtttcccaatc 283 |||||||||||||||||||| Sbjct: 163100 caagcttcagtttcccaatc 163081
>emb|AL121723.36|HSJ854E16 Human DNA sequence from clone RP5-854E16 on chromosome 20 Contains a DKKL1-pending (soggy-1) (SGY-1) pseudogene and part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, complete sequence Length = 70452 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 69290 gagctgcagaagctgattgaagct 69267
>emb|X03431.1|DMIS297 Drosophila melanogaster transposable element 297 Length = 6995 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 1108 tctggagaacttcagggaga 1127
>emb|AL033125.1|DMSEG0007 Drosophila melanogaster sequence EG0007: concatenation of cosmids 30D3:40623-16930, 65G3:42474-1 Length = 66168 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 5252 tctggagaacttcagggaga 5233
>emb|CR859269.1| Pongo pygmaeus mRNA; cDNA DKFZp459O015 (from clone DKFZp459O015) Length = 3376 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2366 gagctgcagaagctgattgaagct 2389
>emb|CR926046.1| Pongo pygmaeus mRNA; cDNA DKFZp459B0620 (from clone DKFZp459B0620) Length = 2591 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2189 gagctgcagaagctgattgaagct 2212
>emb|CR857387.1| Pongo pygmaeus mRNA; cDNA DKFZp469C1332 (from clone DKFZp469C1332) Length = 1825 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1467 gagctgcagaagctgattgaagct 1490
>gb|AF217982.2| Homo sapiens CDK5 regulatory subunit associated protein IC53-2 (PP1553) mRNA, complete cds Length = 2828 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2409 gagctgcagaagctgattgaagct 2432
>emb|CR615649.1| full-length cDNA clone CS0DI052YJ01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1799 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1481 gagctgcagaagctgattgaagct 1504
>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179776 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 153615 tctggagaacttcagggaga 153634
>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165928 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 37318 tctggagaacttcagggaga 37299
>gb|AC104628.6| Drosophila melanogaster X BAC RP98-18C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187772 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 103618 tctggagaacttcagggaga 103599
>gb|AC104702.2| Drosophila melanogaster 3L BAC RP98-11B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153146 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 124614 tctggagaacttcagggaga 124633
>gb|AC104604.7| Drosophila melanogaster X BAC RP98-18K5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167902 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 104433 tctggagaacttcagggaga 104452
>gb|AC010557.4| Drosophila melanogaster 3L BAC RP98-9E21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169425 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 46065 tctggagaacttcagggaga 46084
>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182490 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 144552 tctggagaacttcagggaga 144571
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 aactggcagcaccagctttg 344 |||||||||||||||||||| Sbjct: 83682 aactggcagcaccagctttg 83701
>gb|AC010042.8| Drosophila melanogaster 3L BAC RP98-5K6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157225 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 6827 tctggagaacttcagggaga 6846
>emb|CR626556.1| full-length cDNA clone CS0DG004YD07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1662 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 105266 tctggagaacttcagggaga 105247
>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184796 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 73915 tctggagaacttcagggaga 73896
>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 201313 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 29757 tctggagaacttcagggaga 29776
>emb|CR624059.1| full-length cDNA clone CS0DI057YJ02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1758 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>dbj|AK124412.1| Homo sapiens cDNA FLJ42421 fis, clone BLADE2002782, weakly similar to Rattus norvegicus clone C53 CDK5 activator-binding protein mRNA Length = 2455 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2104 gagctgcagaagctgattgaagct 2127
>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172784 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 72327 tctggagaacttcagggaga 72308
>emb|CR620196.1| full-length cDNA clone CS0DN001YM10 of Adult brain of Homo sapiens (human) Length = 2686 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2366 gagctgcagaagctgattgaagct 2389
>emb|CR615068.1| full-length cDNA clone CS0DL008YF12 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1762 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>emb|CR612080.1| full-length cDNA clone CS0DM010YC14 of Fetal liver of Homo sapiens (human) Length = 1760 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>emb|CR610900.1| full-length cDNA clone CS0DD004YP17 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1193 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 900 gagctgcagaagctgattgaagct 923
>emb|CR610084.1| full-length cDNA clone CS0DC003YF08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1785 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>emb|CR608342.1| full-length cDNA clone CS0DG002YJ16 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1770 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1435 gagctgcagaagctgattgaagct 1458
>dbj|AK092081.1| Homo sapiens cDNA FLJ34762 fis, clone NT2NE2002100 Length = 2271 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acaaaatctgcaagagcaat 212 |||||||||||||||||||| Sbjct: 1229 acaaaatctgcaagagcaat 1248
>emb|CR605714.1| full-length cDNA clone CS0DJ012YA23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1862 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1543 gagctgcagaagctgattgaagct 1566
>emb|CR604422.1| full-length cDNA clone CS0DL004YF22 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1788 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>emb|CR603693.1| full-length cDNA clone CS0DI052YB01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1799 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1481 gagctgcagaagctgattgaagct 1504
>emb|CR600661.1| full-length cDNA clone CS0DI040YI20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1742 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1441 gagctgcagaagctgattgaagct 1464
>emb|CR598665.1| full-length cDNA clone CS0DI060YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 942 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 646 gagctgcagaagctgattgaagct 669
>emb|CR598659.1| full-length cDNA clone CS0DK003YK04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1817 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1498 gagctgcagaagctgattgaagct 1521
>emb|CR598279.1| full-length cDNA clone CS0DI085YA01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1094 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 775 gagctgcagaagctgattgaagct 798
>emb|CR597713.1| full-length cDNA clone CS0DI070YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1957 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1645 gagctgcagaagctgattgaagct 1668
>dbj|AK023722.1| Homo sapiens cDNA FLJ13660 fis, clone PLACE1011586, highly similar to Rattus norvegicus clone C53 CDK5 activator-binding protein mRNA Length = 1848 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1498 gagctgcagaagctgattgaagct 1521
>gb|AC023708.4| Drosophila melanogaster X BAC RP98-12B22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175355 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 6569 tctggagaacttcagggaga 6550
>gb|AC100818.2| Homo sapiens chromosome 8, clone RP11-473J6, complete sequence Length = 178856 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 tacaaaatctgcaagagcaataat 215 ||||||||||| |||||||||||| Sbjct: 112926 tacaaaatctgtaagagcaataat 112903
>gb|AC104459.2| Homo sapiens chromosome 1 clone RP5-838N20, complete sequence Length = 127436 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcagtttcccaatctggaga 289 |||||||||||||||||||| Sbjct: 8313 tcagtttcccaatctggaga 8294
>gb|AF110322.1| Homo sapiens MSTP016 (MST016) mRNA, complete cds Length = 2538 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 2173 gagctgcagaagctgattgaagct 2196
>gb|AC087310.9| Homo sapiens 12p BAC RP11-681I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109567 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gagctgaagaagctgattga 242 |||||||||||||||||||| Sbjct: 36552 gagctgaagaagctgattga 36533
>gb|AY075583.1| Drosophila melanogaster SD08734 full length cDNA Length = 4849 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 811 tctggagaacttcagggaga 830
>gb|AC091225.2| Drosophila melanogaster 3L BAC RP98-34B24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174774 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 41919 tctggagaacttcagggaga 41900
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 34491 tctggagaacttcagggaga 34510
>ref|NM_024488.1| Rattus norvegicus CDK5 regulatory subunit associated protein 3 (Cdk5rap3), mRNA Length = 1865 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1522 gagctgcagaagctgattgaagct 1545
>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone BACR03L12, complete sequence Length = 190672 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 81776 tctggagaacttcagggaga 81757
>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone BACR42J13, complete sequence Length = 179125 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 49604 tctggagaacttcagggaga 49623
>emb|AL929441.37| Mouse DNA sequence from clone RP23-418E20 on chromosome 4, complete sequence Length = 202920 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcagtttcccaatctggaga 289 |||||||||||||||||||| Sbjct: 111717 tcagtttcccaatctggaga 111736
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 aactggcagcaccagctttg 344 |||||||||||||||||||| Sbjct: 76694 aactggcagcaccagctttg 76713
>gb|AC093096.1| Drosophila melanogaster, chromosome 2L, region 35D-35E, BAC clone BACR24H10, complete sequence Length = 165190 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 116726 tctggagaacttcagggaga 116745
>dbj|AK029183.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831410G09 product:unclassifiable, full insert sequence Length = 1465 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aagcttcagtttcccaatct 284 |||||||||||||||||||| Sbjct: 850 aagcttcagtttcccaatct 869
>gb|AC092400.1|AC092400 Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39L06, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 42127 tctggagaacttcagggaga 42146
>gb|AC092396.1|AC092396 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR21C10, complete sequence Length = 164439 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 35982 tctggagaacttcagggaga 35963
>gb|AF343090.1|AF343090 Homo sapiens HSF-27 protein mRNA, complete cds Length = 1826 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1477 gagctgcagaagctgattgaagct 1500
>ref|NR_002867.1| Mus musculus Pax6 opposite strand transcript 1 (Pax6os1) on chromosome 2 Length = 1465 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 aagcttcagtttcccaatct 284 |||||||||||||||||||| Sbjct: 850 aagcttcagtttcccaatct 869
>gb|AC007416.12|AC007416 Drosophila melanogaster, chromosome 2L, region 28B-28B, BAC clone BACR08I01, complete sequence Length = 169427 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 30882 tctggagaacttcagggaga 30901
>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone BACR07M14, complete sequence Length = 181950 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 143596 tctggagaacttcagggaga 143577
>emb|AJ616960.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np093 Length = 409 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 aactggcagcaccagctttg 344 |||||||||||||||||||| Sbjct: 30 aactggcagcaccagctttg 49
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 39975 tctggagaacttcagggaga 39956
>gb|AC008217.5|AC008217 Drosophila melanogaster, chromosome 3R, region 98B-98B, BAC clone BACR10J03, complete sequence Length = 193245 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 186160 tctggagaacttcagggaga 186179
>gb|AC008253.8|AC008253 Drosophila melanogaster, chromosome 3R, region 98B1-98B2, BAC clone BACR48A16, complete sequence Length = 180887 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 154898 tctggagaacttcagggaga 154917
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR02B16, complete sequence Length = 186938 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 19101 tctggagaacttcagggaga 19082
>gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR23B08, complete sequence Length = 161927 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 135327 tctggagaacttcagggaga 135308
>gb|AC011066.5|AC011066 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR02B06, complete sequence Length = 174314 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 59394 tctggagaacttcagggaga 59413
>gb|AC007186.9|AC007186 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR03D06, complete sequence Length = 176306 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 46778 tctggagaacttcagggaga 46797
>gb|AC008314.7|AC008314 Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR02B21, complete sequence Length = 186322 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 168300 tctggagaacttcagggaga 168319
>gb|AC008254.7|AC008254 Drosophila melanogaster, chromosome 3R, region 85C-85C, BAC clone BACR02G22, complete sequence Length = 164982 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 45392 tctggagaacttcagggaga 45411 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 11314 tctggagaacttcagggaga 11333
>gb|AC007645.4|AC007645 Drosophila melanogaster, chromosome 3R, region 86C-86D, BAC clone BACR04L09, complete sequence Length = 165136 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 107189 tctggagaacttcagggaga 107170
>gb|AC008770.7| Homo sapiens chromosome 19 clone CTD-2006C1, complete sequence Length = 178184 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acaaaatctgcaagagcaat 212 |||||||||||||||||||| Sbjct: 712 acaaaatctgcaagagcaat 731
>dbj|AK223387.1| Homo sapiens mRNA for CDK5 regulatory subunit associated protein 3 isoform b variant, clone: FCC106G06 Length = 1866 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1547 gagctgcagaagctgattgaagct 1570
>gb|BT005165.1| Arabidopsis thaliana clone U20148 unknown protein (At5g27030) mRNA, complete cds Length = 3358 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagcagaagtatctcgaggc 38 |||||||||||||||||||| Sbjct: 232 aagcagaagtatctcgaggc 251
>gb|BT004037.1| Arabidopsis thaliana clone RAFL15-05-F05 (R20148) unknown protein (At5g27030) mRNA, complete cds Length = 3635 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagcagaagtatctcgaggc 38 |||||||||||||||||||| Sbjct: 365 aagcagaagtatctcgaggc 384
>gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 137639 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 35224 tctggagaacttcagggaga 35205
>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184175 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 148978 tctggagaacttcagggaga 148959
>gb|AC020951.7| Homo sapiens chromosome 19 clone LLNLR-247E3, complete sequence Length = 35711 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 acaaaatctgcaagagcaat 212 |||||||||||||||||||| Sbjct: 23073 acaaaatctgcaagagcaat 23092
>gb|AC010663.6| Drosophila melanogaster 3L BAC RP98-17M18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193914 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 28550 tctggagaacttcagggaga 28569
>emb|AL512582.7| Mouse DNA sequence from clone RP23-290H11 on chromosome 2, complete sequence Length = 115075 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 aagcttcagtttcccaatct 284 |||||||||||||||||||| Sbjct: 41118 aagcttcagtttcccaatct 41099
>gb|AF177476.1|AF177476 Rattus norvegicus clone C53 CDK5 activator-binding protein mRNA, complete cds Length = 1865 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1522 gagctgcagaagctgattgaagct 1545
>dbj|AK000260.1| Homo sapiens cDNA FLJ20253 fis, clone COLF6895 Length = 2262 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1886 gagctgtagaagctgattgaagct 1909
>gb|BC009957.2| Homo sapiens CDK5 regulatory subunit associated protein 3, transcript variant 3, mRNA (cDNA clone MGC:14989 IMAGE:4130677), complete cds Length = 1832 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1446 gagctgcagaagctgattgaagct 1469
>gb|AC154727.2| Mus musculus BAC clone RP24-375I15 from 14, complete sequence Length = 189907 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 tctgcaagagcaataatgct 218 |||||||||||||||||||| Sbjct: 86801 tctgcaagagcaataatgct 86782
>gb|AF160760.1|F15P11 Arabidopsis thaliana BAC F15P11 Length = 23143 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aagcagaagtatctcgaggc 38 |||||||||||||||||||| Sbjct: 5634 aagcagaagtatctcgaggc 5615
>gb|AF079797.1|AF079797 Homo sapiens human endogenous retrovirus HML6 gag, pol, and env pseudogenes, complete sequence Length = 7736 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 acaaaatctgcaagagcaat 212 |||||||||||||||||||| Sbjct: 3757 acaaaatctgcaagagcaat 3738
>gb|AC005720.6|AC005720 Drosophila melanogaster, chromosome 3L, region 79F1-80A2, BAC clone BACR48E05, complete sequence Length = 190390 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 37795 tctggagaacttcagggaga 37776
>gb|AE003762.4| Drosophila melanogaster chromosome 3R, section 100 of 118 of the complete sequence Length = 231486 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 215838 tctggagaacttcagggaga 215857
>gb|AC007176.1|AC007176 Drosophila melanogaster, chromosome 2L, region 37C1-46B2, BAC clones DS04472 and BACR48O01, complete sequence Length = 160005 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 77231 tctggagaacttcagggaga 77250
>gb|AE003755.5| Drosophila melanogaster chromosome 3R, section 93 of 118 of the complete sequence Length = 171688 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 118273 tctggagaacttcagggaga 118254
>gb|AE003689.2| Drosophila melanogaster chromosome 3R, section 27 of 118 of the complete sequence Length = 215899 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 199683 tctggagaacttcagggaga 199664
>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete sequence Length = 223505 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 186112 tctggagaacttcagggaga 186093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 36751 tctggagaacttcagggaga 36770
>gb|AE003680.4| Drosophila melanogaster chromosome 3R, section 18 of 118 of the complete sequence Length = 270517 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 243240 tctggagaacttcagggaga 243259 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 209162 tctggagaacttcagggaga 209181
>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the complete sequence Length = 228314 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 121991 tctggagaacttcagggaga 121972
>gb|AE003661.3| Drosophila melanogaster chromosome 2L, section 70 of 83 of the complete sequence Length = 265558 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 238754 tctggagaacttcagggaga 238773
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 71743 tctggagaacttcagggaga 71724
>gb|AE003648.2| Drosophila melanogaster chromosome 2L, section 57 of 83 of the complete sequence Length = 284900 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 60115 tctggagaacttcagggaga 60134
>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete sequence Length = 265341 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 244151 tctggagaacttcagggaga 244170
>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete sequence Length = 289460 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 109666 tctggagaacttcagggaga 109685
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 238741 tctggagaacttcagggaga 238722
>gb|AE003619.3| Drosophila melanogaster chromosome 2L, section 28 of 83 of the complete sequence Length = 289516 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 157113 tctggagaacttcagggaga 157132
>gb|AE003841.5| Drosophila melanogaster chromosome 2R, section 9 of 73 of the complete sequence Length = 266427 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 18087 tctggagaacttcagggaga 18068
>gb|AE003838.3| Drosophila melanogaster chromosome 2R, section 12 of 73 of the complete sequence Length = 226833 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 65589 tctggagaacttcagggaga 65608
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 188298 tctggagaacttcagggaga 188317
>gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80 of 83 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 198499 tctggagaacttcagggaga 198518
>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete sequence Length = 295132 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 239079 tctggagaacttcagggaga 239098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 32017 tctggagaacttcagggaga 32036
>gb|AE003574.6| Drosophila melanogaster chromosome X, section 73 of 74 of the complete sequence Length = 273468 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 187100 tctggagaacttcagggaga 187119
>gb|AE003573.4| Drosophila melanogaster chromosome X, section 74 of 74 of the complete sequence Length = 313035 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 270800 tctggagaacttcagggaga 270781 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 247529 tctggagaacttcagggaga 247510
>gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26 of 83 of the complete sequence Length = 269948 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 169166 tctggagaacttcagggaga 169185
>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete sequence Length = 287988 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 36071 tctggagaacttcagggaga 36052
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 33630 tctggagaacttcagggaga 33649
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 312550 tctggagaacttcagggaga 312569
>gb|AE003494.4| Drosophila melanogaster chromosome X, section 46 of 74 of the complete sequence Length = 310498 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 299213 tctggagaacttcagggaga 299194
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 262376 tctggagaacttcagggaga 262357
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete sequence Length = 307657 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 88708 tctggagaacttcagggaga 88689
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 39433 tctggagaacttcagggaga 39452
>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete sequence Length = 307201 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 149121 tctggagaacttcagggaga 149140
>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete sequence Length = 318665 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 175867 tctggagaacttcagggaga 175848
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 215614 tctggagaacttcagggaga 215595
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 68539 tctggagaacttcagggaga 68520
>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete sequence Length = 296227 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 65749 tctggagaacttcagggaga 65768
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 282557 tctggagaacttcagggaga 282576
>gb|AE003122.5| Drosophila melanogaster chromosome X, section 72 of 74 of the complete sequence Length = 306367 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 30872 tctggagaacttcagggaga 30853
>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete sequence Length = 297848 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 127609 tctggagaacttcagggaga 127628
>gb|AC005558.1|AC005558 Drosophila melanogaster DNA sequence (P1s DS08923 (D95) and DS06400 (D74)), complete sequence Length = 124700 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 34097 tctggagaacttcagggaga 34078
>gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 DS01386 (D198)), complete sequence Length = 61849 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 23915 tctggagaacttcagggaga 23934
>gb|CP000226.1| Drosophila melanogaster genomic scaffold 211000022280776 Length = 277780 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 229199 tctggagaacttcagggaga 229218
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790 Length = 626829 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 522170 tctggagaacttcagggaga 522151
>gb|CP000221.1| Drosophila melanogaster genomic scaffold 211000022280740 Length = 552562 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 486745 tctggagaacttcagggaga 486726
>gb|CP000219.1| Drosophila melanogaster genomic scaffold 211000022280778 Length = 150125 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 144436 tctggagaacttcagggaga 144417
>gb|CP000218.1| Drosophila melanogaster genomic scaffold 211000022280780 Length = 166742 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 162989 tctggagaacttcagggaga 163008
>gb|CP000213.1| Drosophila melanogaster genomic scaffold 211000022280725 Length = 226945 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 199434 tctggagaacttcagggaga 199453 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 193498 tctggagaacttcagggaga 193517
>gb|CP000207.1| Drosophila melanogaster genomic scaffold 211000022280721 Length = 230078 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 27338 tctggagaacttcagggaga 27319
>gb|CP000194.1| Drosophila melanogaster genomic scaffold 211000022280737 Length = 77432 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 14208 tctggagaacttcagggaga 14227
>gb|CP000183.1| Drosophila melanogaster genomic scaffold 211000022280458 Length = 100390 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 1042 tctggagaacttcagggaga 1023
>gb|CP000171.1| Drosophila melanogaster genomic scaffold 211000022279379 Length = 73267 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 52710 tctggagaacttcagggaga 52729
>gb|AC003055.1|AC003055 Drosophila melanogaster (P1 DS06332 (D91)) DNA sequence, complete sequence Length = 73076 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctggagaacttcagggaga 166 |||||||||||||||||||| Sbjct: 3867 tctggagaacttcagggaga 3848
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete sequence Length = 224168 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tctgcaagagcaataatgct 218 |||||||||||||||||||| Sbjct: 13287 tctgcaagagcaataatgct 13306
>emb|AL611931.22| Mouse DNA sequence from clone RP23-460D14 on chromosome 4, complete sequence Length = 201635 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 atcacacagctattaactctggag 153 ||||| |||||||||||||||||| Sbjct: 58808 atcactcagctattaactctggag 58785
>emb|AL645545.8| Mouse DNA sequence from clone RP23-203J4 on chromosome X, complete sequence Length = 181243 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aaggacttgaaggtgtttgcatcc 105 |||||||||| ||||||||||||| Sbjct: 176005 aaggacttgagggtgtttgcatcc 175982
>dbj|AB062433.1| Homo sapiens OK/SW-cl.114 mRNA, complete cds Length = 1816 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gagctgaagaagctgattgaagct 246 |||||| ||||||||||||||||| Sbjct: 1446 gagctgcagaagctgattgaagct 1469 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,861,191 Number of Sequences: 3902068 Number of extensions: 2861191 Number of successful extensions: 62008 Number of sequences better than 10.0: 214 Number of HSP's better than 10.0 without gapping: 214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61613 Number of HSP's gapped (non-prelim): 392 length of query: 346 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 324 effective length of database: 17,147,199,772 effective search space: 5555692726128 effective search space used: 5555692726128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)