>KCNC2_RAT (P22462) Potassium voltage-gated channel subfamily C member 2|
           (Voltage-gated potassium channel subunit Kv3.2)
           (KSHIIIA)
          Length = 638

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 4   IEGITRGTTRLSPPPQPYRSLAPL-RCAAPIPSVL 105
           I G+     RLSP   PY S  PL R  +PIPS+L
Sbjct: 604 IAGLAGNALRLSPVTSPYNSPCPLRRSRSPIPSIL 638

>TEP1_HUMAN (Q99973) Telomerase protein component 1 (Telomerase-associated|
           protein 1) (Telomerase protein 1) (p240) (p80 telomerase
           homolog)
          Length = 2627

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 128 EMAENWVEGSKNTSAPTSFSGSPPGC-HTASTRRSRQRNIFHLLSHREVSPRTKHQAKRH 304
           E+ ++  EG KN   P       P C  TA T +  Q + + L  +   +PR KH+AKRH
Sbjct: 341 ELYQSLAEGDKNKLVPL------PACLRTAMTDKFAQFDEYQLAKY---NPR-KHRAKRH 390

Query: 305 WNKPP 319
             +PP
Sbjct: 391 PRRPP 395

>PDE4C_DROME (Q9W4S9) cAMP-specific 3',5'-cyclic phosphodiesterase, isoforms N/G|
           (EC 3.1.4.17) (Learning/memory process protein) (Protein
           dunce)
          Length = 983

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
 Frame = +2

Query: 50  NPTARLLLSGAPRRSPQFYFR*I*RTEMAENWVEGSKNTSAPTSFSGS----PPGCHTAS 217
           +P+A L+L   P+R   F +R     EM+   +  S+N+S  +   G      P     +
Sbjct: 328 SPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSM--SRNSSIASESHGEDLIVTPFAQILA 385

Query: 218 TRRSRQRNIFHL----LSHREVSPRTKHQAKRHWNKPPA-CGAGYSELRYLATDAKHDLF 382
           + RS + N+  L     S++   P     A R  N P A    G      LATD   +L 
Sbjct: 386 SLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPPGAPLSQGEEAYTRLATDTIEEL- 444

Query: 383 SWAESQ 400
            W   Q
Sbjct: 445 DWCLDQ 450

>Y101_STAAM (Q99XB1) Putative HTH-type transcriptional regulator SAV0101|
          Length = 745

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +3

Query: 114 EYKGLKWLKIG*KAQKILLLRRHSLDRPLVV----TPLQQEDQGKGTYFIY*VIERCLLE 281
           E+K    + I      I L+ RH+L RPL++    T         G YF   +I   LL+
Sbjct: 497 EFKTASQMIINKTNYLIDLMHRHNLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLK 556

Query: 282 QNTKLKGIG 308
            +TK++GIG
Sbjct: 557 LSTKVEGIG 565

>Y097_STAAN (Q7A882) Putative HTH-type transcriptional regulator SA0097|
          Length = 745

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +3

Query: 114 EYKGLKWLKIG*KAQKILLLRRHSLDRPLVV----TPLQQEDQGKGTYFIY*VIERCLLE 281
           E+K    + I      I L+ RH+L RPL++    T         G YF   +I   LL+
Sbjct: 497 EFKTASQMIINKTNYLIDLMHRHNLKRPLILLNWNTLTGDTFITNGEYFRGGIIIEQLLK 556

Query: 282 QNTKLKGIG 308
            +TK++GIG
Sbjct: 557 LSTKVEGIG 565

>YFF9_SCHPO (O14066) Hypothetical serine-rich protein C1687.09 in chromosome I|
          Length = 1379

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 4   IEGITRGTTRLSPPPQPYRSLAPLRCAAPIPS 99
           +E +  G ++L+   QP++S  PL  A P+P+
Sbjct: 323 MERLKNGASKLAIESQPFKSAEPLSSAIPLPN 354

>SYE_METKA (Q8TXB7) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 571

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  GERLVSLHPRNPTARLLLSG 79
           GER++ LHP N  AR LL G
Sbjct: 439 GERVLILHPENGVARALLDG 458


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,475,281
Number of Sequences: 219361
Number of extensions: 1279450
Number of successful extensions: 3748
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)