ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 434 e-119
2gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 172 5e-40
3ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 170 2e-39
4dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 2e-39
5ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 168 7e-39
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 157 3e-35
7gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 157 3e-35
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 3e-35
9emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 155 1e-34
10gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 145 1e-31
11gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence 145 1e-31
12gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 131 2e-27
13gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 131 2e-27
14gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 125 1e-25
15gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene,... 117 2e-23
16gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 113 4e-22
17gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (L... 111 2e-21
18gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene... 80 5e-12
19gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of... 44 0.29
20ref|NM_003028.1| Homo sapiens Src homology 2 domain containing a... 42 1.2
21gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-car... 42 1.2
22emb|X75342.1|HSSHB H.sapiens SHB mRNA 42 1.2
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.2
24dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.2
25gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.2
26gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
27gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 4.6
28gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 4.6
29gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 4.6
30gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 4.6
31gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 40 4.6
32emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 4.6
33gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.6
34gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hos... 40 4.6
35ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG119... 40 4.6
36emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.6
37emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0... 40 4.6
38gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 40 4.6
39gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.6
40gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 4.6
41dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
42gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.6 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  434 bits (219), Expect = e-119
 Identities = 225/227 (99%)
 Strand = Plus / Plus

                                                                       
Query: 121 cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 138 cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcccacgtcatggacggcgt 197

                                                                       
Query: 181 caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacca 257

                                                                       
Query: 241 caacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 caacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgcc 317

                                                          
Query: 301 gacgaacctgccgttcatcaccaccggcgagaacaagttcgccgtca 347
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gacgaacctgccgttcatcaccaccggcgagaacaagttcgccgtca 364



 Score =  145 bits (73), Expect = 1e-31
 Identities = 116/125 (92%), Gaps = 4/125 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60
           |||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4   acacagca-caccgcagcgagctaacttag-aagcgtgccacactccc-agagatcgagc 60

                                                                       
Query: 61  gaagatgttcggcgtcggcggcatcgtgagcgacctgacggggggcctccggggcgccca 120
            |||||| | |||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 61  -aagatgcttggcgtcggcggcatcgtgagcgacttgacggggggcatccggggcgccca 119

                
Query: 121 cctca 125
           |||||
Sbjct: 120 cctca 124
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  172 bits (87), Expect = 5e-40
 Identities = 150/171 (87%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
           |||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||| ||
Sbjct: 141 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatc 200

                                                                       
Query: 182 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 241
             |||| ||||||||   ||||||||||||||||| ||||||||||||  ||||||||| 
Sbjct: 201 ggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaa 260

                                                              
Query: 242 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 292
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 261 gacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 311
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score =  170 bits (86), Expect = 2e-39
 Identities = 152/174 (87%)
 Strand = Plus / Plus

                                                                       
Query: 121 cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
           |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 66  cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgacggcat 125

                                                                       
Query: 181 caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacca 240
           | ||||| ||||||||||||||||||||||||||||| |||||||| ||  |||||||| 
Sbjct: 126 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgaccc 185

                                                                 
Query: 241 caacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           |||||| ||     | |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 186 caacaatgggaacagggggagggtggggacggaggcgagcctggagcagtggct 239
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
           insert sequence
          Length = 2928

 Score =  170 bits (86), Expect = 2e-39
 Identities = 152/174 (87%)
 Strand = Plus / Plus

                                                                       
Query: 121 cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
           |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 181 cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgacggcat 240

                                                                       
Query: 181 caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacca 240
           | ||||| ||||||||||||||||||||||||||||| |||||||| ||  |||||||| 
Sbjct: 241 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgaccc 300

                                                                 
Query: 241 caacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           |||||| ||     | |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 301 caacaatgggaacagggggagggtggggacggaggcgagcctggagcagtggct 354
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score =  168 bits (85), Expect = 7e-39
 Identities = 151/173 (87%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
           ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 70  ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 129

                                                                       
Query: 182 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 241
             |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||  
Sbjct: 130 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgaccca 189

                                                                
Query: 242 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           ||||||||    || ||||||||||| |||||||||| |||||||||||||||
Sbjct: 190 aacaacggcaaccgggggaaggtgggggcggaggcgagcctggagcagtggct 242
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  157 bits (79), Expect = 3e-35
 Identities = 109/119 (91%)
 Strand = Plus / Plus

                                                                            
Query: 121      cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
                |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 30023325 cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgacggcat 30023384

                                                                           
Query: 181      caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
                | ||||| ||||||||||||||||||||||||||||| |||||||| ||  ||||||||
Sbjct: 30023385 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgacc 30023443



 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
                ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 27798775 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 27798834

                                                                          
Query: 182      accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
                  |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 27798835 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 27798892



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 257      gggaaggtgggcgcggaggcgaacctggagcagtggct 294
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggct 27799345



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 257      gggaaggtgggcgcggaggcgaacctggagcagtggct 294
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30023539 gggagggtggggacggaggcgagcctggagcagtggct 30023576



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24817033 ggcgtcggcggcatcgtgag 24817052



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 69      tcggcgtcggcggcatcgtg 88
               ||||||||||||||||||||
Sbjct: 3907716 tcggcgtcggcggcatcgtg 3907735
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score =  157 bits (79), Expect = 3e-35
 Identities = 109/119 (91%)
 Strand = Plus / Minus

                                                                         
Query: 121   cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
             |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 84426 cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgacggcat 84367

                                                                        
Query: 181   caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
             | ||||| ||||||||||||||||||||||||||||| |||||||| ||  ||||||||
Sbjct: 84366 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgacc 84308



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 257   gggaaggtgggcgcggaggcgaacctggagcagtggct 294
             |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 84212 gggagggtggggacggaggcgagcctggagcagtggct 84175
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  157 bits (79), Expect = 3e-35
 Identities = 109/119 (91%)
 Strand = Plus / Plus

                                                                            
Query: 121      cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
                |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| |
Sbjct: 30114747 cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgacggcat 30114806

                                                                           
Query: 181      caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
                | ||||| ||||||||||||||||||||||||||||| |||||||| ||  ||||||||
Sbjct: 30114807 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgacc 30114865



 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
                ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 27890099 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 27890158

                                                                          
Query: 182      accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
                  |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 27890159 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 27890216



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 257      gggaaggtgggcgcggaggcgaacctggagcagtggct 294
                ||||||||||| |||||||||| |||||||||||||||
Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggct 27890669



 Score = 44.1 bits (22), Expect = 0.29
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 257      gggaaggtgggcgcggaggcgaacctggagcagtggct 294
                |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 30114961 gggagggtggggacggaggcgagcctggagcagtggct 30114998



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       ggcgtcggcggcatcgtgag 90
                ||||||||||||||||||||
Sbjct: 24908356 ggcgtcggcggcatcgtgag 24908375



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 69      tcggcgtcggcggcatcgtg 88
               ||||||||||||||||||||
Sbjct: 3907827 tcggcgtcggcggcatcgtg 3907846
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score =  155 bits (78), Expect = 1e-34
 Identities = 150/174 (86%)
 Strand = Plus / Plus

                                                                       
Query: 121 cctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgt 180
           |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  || |
Sbjct: 163 cctcatgcgcaagaacgccctcgacatcaacgacttcggcgccaccgtcatcgagcgcat 222

                                                                       
Query: 181 caccgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacca 240
           | ||||| ||||||||||||||||||||||||||||| |||||||| ||  |||||||| 
Sbjct: 223 ctccgagttcctcggccgcggcgtcacctgccagctcgtcagctcctccctcgtcgaccc 282

                                                                 
Query: 241 caacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           |||||| ||     | |||| ||||||  ||||||||| |||||||||||||||
Sbjct: 283 caacaatgggaacagggggagggtggggacggaggcgagcctggagcagtggct 336
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 70  ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 129

                                                                       
Query: 182 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 241
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||  |
Sbjct: 130 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgacgcc 189

                                                                
Query: 242 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           ||||||||    ||||||  ||| || ||||||||||||||||||||||||||
Sbjct: 190 aacaacggcaaccgcgggcgggtcggggcggaggcgaacctggagcagtggct 242
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>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence
          Length = 515

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 132 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 191

                                                                       
Query: 182 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 241
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||  |
Sbjct: 192 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgacgcc 251

                                                                
Query: 242 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           ||||||||    ||||||  ||| || ||||||||||||||||||||||||||
Sbjct: 252 aacaacggcaaccgcgggcgggtcggggcggaggcgaacctggagcagtggct 304
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Plus

                                                                         
Query: 122   ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
             ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 42905 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 42964

                                                                       
Query: 182   accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
               |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 42965 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 43022



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 257   gggaaggtgggcgcggaggcgaacctggagcagtggct 294
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggct 43475
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score =  131 bits (66), Expect = 2e-27
 Identities = 105/118 (88%)
 Strand = Plus / Minus

                                                                         
Query: 122   ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
             ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||||| ||
Sbjct: 15118 ctcatgcgcaagaacgtcctcgacctcaacgacttcggcgccaccgtcatcgacggcctc 15059

                                                                       
Query: 182   accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgacc 239
               |||| ||||||||   ||||||||||||||||||||||||||||||  ||||||||
Sbjct: 15058 ggcgagttcctcggcaagggcgtcacctgccagctcatcagctccaccgccgtcgacc 15001



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 257   gggaaggtgggcgcggaggcgaacctggagcagtggct 294
             ||||||||||| |||||||||| |||||||||||||||
Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggct 14548
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccacaa 243
           |||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||  ||
Sbjct: 153 cgagttcctcggccgcggcgtcacctgccagcttatcagctccaccgtcgtcgaccctaa 212

                                                              
Query: 244 caacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtggct 294
           ||||||    ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 213 caacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagtggct 263
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>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds
          Length = 1160

 Score =  117 bits (59), Expect = 2e-23
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 128 cgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtcaccgag 187
           ||||||||||| |||||| ||||||||||||||||||||||| | |   ||||| |||||
Sbjct: 1   cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60

                                                  
Query: 188 ctcctcggccgcggcgtcacctgccagctcatcagctcc 226
            ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                       
Query: 122 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
           |||||||||||||||| ||| ||| ||||||||||||||||||||||| | ||| || ||
Sbjct: 218 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccgtcgttgacagcatc 277

                                                                    
Query: 182 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgac 238
           | |||| ||||||||   || |||||||||||||||||||||||||||  |||||||
Sbjct: 278 agcgagttcctcggcaagggggtcacctgccagctcatcagctccaccctcgtcgac 334



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 269 gcggaggcgaacctggagcagtggct 294
           ||||||||||||||||||||||||||
Sbjct: 945 gcggaggcgaacctggagcagtggct 970
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>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter
            region and partial cds
          Length = 5236

 Score =  111 bits (56), Expect = 2e-21
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 122  ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgccaccgtcatggacggcgtc 181
            |||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||| ||
Sbjct: 3584 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatc 3643

                                                            
Query: 182  accgagctcctcggccgcggcgtcacctgccagctcatcagctccacc 229
              |||| ||||||||   ||||||||||||||||| ||||||||||||
Sbjct: 3644 ggcgagttcctcggcaagggcgtcacctgccagcttatcagctccacc 3691



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 243  acaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 292
            ||||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 4255 acaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 4304
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>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region
            and partial cds
          Length = 3196

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                        
Query: 168  tcatggacggcgtcaccgagctcctcggccgcggcgtcacctgccagctcatcagctcca 227
            ||||||||||| ||  |||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446

                        
Query: 228  ccaacgtcgacc 239
            ||  ||||||||
Sbjct: 2447 ccgtcgtcgacc 2458



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 254  cgcgggaaggtgggcgcggaggcgaacctggagcagtggctcctgc 299
            ||||||||||||||   |||||||| ||||||||||||||| ||||
Sbjct: 2744 cgcgggaaggtgggtcaggaggcgagcctggagcagtggctgctgc 2789
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>gb|AE005807.1| Caulobacter crescentus CB15 section 133 of 359 of the complete genome
          Length = 8803

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 136  cgcgctcgacttcaacgacttcggcg 161
            ||||| ||||||||||||||||||||
Sbjct: 4469 cgcgcacgacttcaacgacttcggcg 4494
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>ref|NM_003028.1| Homo sapiens Src homology 2 domain containing adaptor protein B
           (SHB), mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>gb|AY596511.1| Helicosporidium sp. ex Simulium jonesii gamma-carbonic anhydrase
           mRNA, partial cds
          Length = 775

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 157 cggcgccaccgtcatggacggcgtcaccg 185
           ||||||||| ||||||||||||| |||||
Sbjct: 400 cggcgccacggtcatggacggcgccaccg 428
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>emb|X75342.1|HSSHB H.sapiens SHB mRNA
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  cggggggcctccggggcgccc 119
           |||||||||||||||||||||
Sbjct: 469 cggggggcctccggggcgccc 449
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 70      cggcgtcggcggcatcgtgagcgac 94
               ||||||||||||||||||| |||||
Sbjct: 5079436 cggcgtcggcggcatcgtgcgcgac 5079412
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 70     cggcgtcggcggcatcgtgagcgac 94
              ||||||||||||||||||| |||||
Sbjct: 590305 cggcgtcggcggcatcgtgcgcgac 590329



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 126    tgcgcaagaacgcgctcgacttca 149
              ||||||||||| ||||||||||||
Sbjct: 206796 tgcgcaagaacccgctcgacttca 206773
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 70     cggcgtcggcggcatcgtgagcgac 94
              ||||||||||||||||||| |||||
Sbjct: 657732 cggcgtcggcggcatcgtgcgcgac 657756
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>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13
             map near C50029S, complete sequence
          Length = 129900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggcgtcggcggcatcgtgag 90
             ||||||||||||||||||||
Sbjct: 52268 ggcgtcggcggcatcgtgag 52287
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 70      cggcgtcggcggcatcgtga 89
               ||||||||||||||||||||
Sbjct: 3161121 cggcgtcggcggcatcgtga 3161102
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    gctcctgccgacgaacctgc 311
              ||||||||||||||||||||
Sbjct: 137505 gctcctgccgacgaacctgc 137486
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 306    acctgccgttcatcaccaccggcg 329
              ||||||||||||||| ||||||||
Sbjct: 288875 acctgccgttcatcatcaccggcg 288852
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    acctgccgttcatcaccaccggcg 329
              ||||||||||||||| ||||||||
Sbjct: 153202 acctgccgttcatcatcaccggcg 153225
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>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     cggcggcatcgtgagcgacctgac 99
              ||||||||||| ||||||||||||
Sbjct: 205636 cggcggcatcgagagcgacctgac 205659
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    cggcggcatcgtgagcgacctgac 99
             ||||||||||| ||||||||||||
Sbjct: 80122 cggcggcatcgagagcgacctgac 80099
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     agctcctcggccgcggcgtc 205
               ||||||||||||||||||||
Sbjct: 1962239 agctcctcggccgcggcgtc 1962220
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>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 228052

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   agctcatcagctccaccaac 232
             ||||||||||||||||||||
Sbjct: 82121 agctcatcagctccaccaac 82102
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>ref|XM_967239.1| PREDICTED: Tribolium castaneum similar to CG11980-PC, isoform C
           (LOC661050), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 caccaacgtcgaccacaaca 245
           ||||||||||||||||||||
Sbjct: 239 caccaacgtcgaccacaaca 220
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     gccgttcatcaccaccggcg 329
               ||||||||||||||||||||
Sbjct: 1867059 gccgttcatcaccaccggcg 1867040
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>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128559

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ggcgtcggcggcatcgtgag 90
              ||||||||||||||||||||
Sbjct: 103984 ggcgtcggcggcatcgtgag 104003
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>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   acctggagcagtggctcctg 298
             ||||||||||||||||||||
Sbjct: 78731 acctggagcagtggctcctg 78750
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>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19,
              complete sequence
          Length = 168430

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tcggcgtcggcggcatcgtg 88
              ||||||||||||||||||||
Sbjct: 114189 tcggcgtcggcggcatcgtg 114208
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 156     tcggcgccaccgtcatggacggcg 179
               ||||||||| ||||||||||||||
Sbjct: 2990742 tcggcgccatcgtcatggacggcg 2990719
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>dbj|AK109329.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B01, full
           insert sequence
          Length = 1556

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  ggcgtcggcggcatcgtgag 90
           ||||||||||||||||||||
Sbjct: 613 ggcgtcggcggcatcgtgag 594
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 172     ggacggcgtcaccgagctcctcggccgcggcg 203
               ||||||||| | |||| |||||||||||||||
Sbjct: 1448865 ggacggcgtgatcgagttcctcggccgcggcg 1448834


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,998,908
Number of Sequences: 3902068
Number of extensions: 1998908
Number of successful extensions: 47193
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45848
Number of HSP's gapped (non-prelim): 1337
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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