ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl15h03 |
|---|---|
| Clone Library Name | barley_pub |
>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21| Length = 1447 Score = 35.0 bits (79), Expect = 0.043 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +1 Query: 109 LKMSSGGGWSNFEDQALVVLVHDSGQNWELVSDAINNIVQFKS--VHRQPKECKER 270 L+ W+ ED+ L LV + NW L+S + QF S R P EC ER Sbjct: 837 LESRQSSQWTYAEDEELRSLVEEYSYNWSLISSCLTPSSQFTSGAERRTPWECFER 892
>CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division control| protein 5) Length = 757 Score = 33.9 bits (76), Expect = 0.095 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKERHRVLVD 288 GG W N ED+ L V G+N W +S + V + PK+CK R +D Sbjct: 6 GGAWKNTEDEILKAAVSKYGKNQWARISSLL--------VRKTPKQCKARWYEWID 53
>VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21| Length = 985 Score = 33.9 bits (76), Expect = 0.095 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +1 Query: 133 WSNFEDQALVVLVHDSGQNWELVSDAIN-NIVQFKSVHRQPKECKER 270 WS ED+ L+ LV NW+L++D+ N ++ R P EC ER Sbjct: 420 WSPEEDKCLLKLVAMYPFNWDLIADSFNTEMILIPVEKRNPYECWER 466
>MYB1_NEUCR (O13493) Myb-like DNA binding protein myb-1| Length = 324 Score = 33.1 bits (74), Expect = 0.16 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +1 Query: 127 GGWSNFEDQALVVLVHDSGQ-NWELVSDAINNIVQFKSVHRQPKECKER 270 G WS EDQ L+ LV D G NW V+ + R PK+C+ER Sbjct: 10 GPWSAGEDQRLIKLVKDLGPGNWVNVARILGT--------RTPKQCRER 50
>CEF1_USTMA (Q4P652) Pre-mRNA-splicing factor CEF1| Length = 820 Score = 32.0 bits (71), Expect = 0.36 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 GG W N ED+ L + G+N W +S + V + PK+CK R Sbjct: 8 GGVWKNTEDEILKAAISKYGKNQWARISSLL--------VRKTPKQCKAR 49
>CEF1_CRYNE (Q5K9L1) Pre-mRNA-splicing factor CEF1| Length = 838 Score = 31.6 bits (70), Expect = 0.47 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 GG W N ED+ L + G+N W +S + V + PK+CK R Sbjct: 7 GGVWRNTEDEILKAAISKYGKNQWARISSLL--------VRKTPKQCKAR 48
>CEF1_NEUCR (Q7SAF6) Pre-mRNA-splicing factor cef-1| Length = 779 Score = 31.2 bits (69), Expect = 0.62 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKERHRVLVD 288 GG W+N ED+ L V G N W VS + + PK+CK R +D Sbjct: 6 GGVWTNIEDEILKASVSKYGLNQWARVSSLL--------ARKTPKQCKARWNEWLD 53
>CEF1_MAGGR (Q52G60) Pre-mRNA-splicing factor CEF1| Length = 773 Score = 31.2 bits (69), Expect = 0.62 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKERHRVLVD 288 GG W+N ED+ L V G N W VS + + PK+CK R +D Sbjct: 6 GGVWTNIEDEILKASVSKYGLNQWARVSSLL--------ARKTPKQCKARWNEWLD 53
>VID21_YEAST (Q06337) Chromatin modification-related protein VID21| (ESA1-associated factor 1) (Vacuolar import and degradation protein 21) Length = 982 Score = 31.2 bits (69), Expect = 0.62 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Frame = +1 Query: 133 WSNFEDQALVVLVHDSGQNWELVSDAINNIVQFKSV----HRQPKECKER 270 W + +DQ LV ++ G NWEL+S + + + + + R P +C ER Sbjct: 650 WLSEDDQELVKNINTYGYNWELISAHMTHRLTYSYLSNIERRTPWQCFER 699
>CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1| Length = 792 Score = 31.2 bits (69), Expect = 0.62 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 GG W+N ED+ L V G N W VS + + PK+CK R Sbjct: 6 GGVWTNIEDEVLRAAVSKYGLNQWARVSSLL--------ARKTPKQCKAR 47
>CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1| Length = 791 Score = 31.2 bits (69), Expect = 0.62 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 GG W+N ED+ L V G N W VS + + PK+CK R Sbjct: 6 GGVWTNIEDEVLRAAVSKYGLNQWARVSSLL--------ARKTPKQCKAR 47
>VID21_KLULA (Q6CMB8) Chromatin modification-related protein VID21| Length = 1005 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = +1 Query: 100 VKALKMSSGGGWSNFEDQALVVLVHDSGQNWELVSDAINNIVQFKSV----HRQPKECKE 267 ++ LK + W +DQ LV ++ NW+L+S ++N + + V R P +C E Sbjct: 677 LRYLKFRTPTIWLPEDDQELVKNINQYAYNWDLISSQMSNHHKREYVSNIERRTPWQCFE 736 Query: 268 RHRVLVDK 291 R L +K Sbjct: 737 RFVQLNEK 744
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +1 Query: 187 NWELVSDAINNIVQFKSVHRQPKECKERHRVLV 285 NW+LVSD +N+ ++R K+C+ R+ ++ Sbjct: 2316 NWDLVSDVVNSC---SRIYRSSKQCRNRYENVI 2345
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/33 (33%), Positives = 21/33 (63%) Frame = +1 Query: 187 NWELVSDAINNIVQFKSVHRQPKECKERHRVLV 285 NW+LVSD +N+ ++R K+C+ R+ ++ Sbjct: 2400 NWDLVSDVVNSC---SRIYRSSKQCRNRYENVI 2429
>MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like protein 1)| (Protein PC-MYB1) (PC-MYB1) Length = 776 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 88 RGRKVKALKMSSGGGWSNFEDQALVVLVHD-SGQNWELVSDAINNIVQFKSVHRQPK 255 +GR + S+ G W+ ED+ L V G+NW+ +++ + + +HR K Sbjct: 23 QGRTSGPARRSTKGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQK 79
>MYB_DROME (P04197) Myb protein| Length = 657 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 124 GGGWSNFEDQALVVLVHDSGQNWELV 201 G WS ED L LV G+NWE++ Sbjct: 85 GKRWSKSEDVLLKQLVETHGENWEII 110
>ARNT_SALCH (Q57M54) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) Length = 547 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3 Query: 387 LPGATL--WNARYGEMILLG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELHNVI 214 LPGA W R G LLG T + +I + + ++ FA + M R LHNV Sbjct: 275 LPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVK 334 Query: 213 DCIA 202 + IA Sbjct: 335 EGIA 338
>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein| 2) (XMYB2) Length = 728 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +1 Query: 127 GGWSNFEDQALVVLVHDSG-QNWELVSDAINNIVQFKSVHRQPKECKER 270 G W+ EDQ ++ LVH G + W +++ + R K+C+ER Sbjct: 87 GPWTKEEDQRVIELVHKYGPKKWSIIAKHLKG--------RIGKQCRER 127
>ARNT_SALTY (O52327) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) (Polymyxin resistance protein pmrK) Length = 547 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3 Query: 387 LPGATL--WNARYGEMILLG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELHNVI 214 LPGA W R G LLG T + +I + + ++ FA + M R LHNV Sbjct: 275 LPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVK 334 Query: 213 DCIA 202 + +A Sbjct: 335 EGVA 338
>ARNT_SALTI (Q8Z538) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) (Polymyxin resistance protein pmrK) (Mel Length = 547 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3 Query: 387 LPGATL--WNARYGEMILLG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELHNVI 214 LPGA W R G LLG T + +I + + ++ FA + M R LHNV Sbjct: 275 LPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVK 334 Query: 213 DCIA 202 + +A Sbjct: 335 EGVA 338
>ARNT_SALPA (Q5PNA8) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) Length = 547 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Frame = -3 Query: 387 LPGATL--WNARYGEMILLG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELHNVI 214 LPGA W R G LLG T + +I + + ++ FA + M R LHNV Sbjct: 275 LPGALKLGWRERNGAFYLLGWTIMPLLFFSIAKGKLPTYVLSCFAPIAILMARFVLHNVK 334 Query: 213 DCIA 202 + +A Sbjct: 335 EGVA 338
>FIXN_AGRT7 (P98055) Cytochrome c oxidase subunit 1 homolog (EC 1.9.3.1)| (Cytochrome c oxidase polypeptide I homolog) Length = 539 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +2 Query: 224 CSSSLYIDNL-KNAKSAIGFWWIKALVMVLTVQKTLVHPNSIISPYLAFHRVAP 382 C + Y D + K A FW + ++ + V L P+ I+PY F R+ P Sbjct: 62 CRRTEYFDEVVKYGVMATVFWGVVGFLVGVVVALQLAFPDLNIAPYFNFGRMRP 115
>R4RL1_HUMAN (Q86UN2) Reticulon-4 receptor-like 1 precursor (Nogo-66 receptor| homolog 2) (Nogo-66 receptor-related protein 3) (NgR3) (Nogo receptor-like 2) Length = 441 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 87 PWEKSESAKDVFWWWMVKLRGSGSCCPC 170 PW+ A+ + W W+ + RGS S PC Sbjct: 256 PWDCGCRARSL-WEWLQRFRGSSSAVPC 282
>VID21_ASHGO (Q756L0) Chromatin modification-related protein VID21| Length = 957 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = +1 Query: 100 VKALKMSSGGGWSNFEDQALVVLVHDSGQNWELVSDAI---NNIVQFKSVHRQ-PKECKE 267 ++ LK + WS +DQ LV ++ NW+L+ + N ++ R+ P +C E Sbjct: 573 LRYLKFRTPTIWSPEDDQELVKNINQYAYNWDLIGALVSSSNGRSYISNIERRTPWQCFE 632 Query: 268 RHRVLVDK 291 R L +K Sbjct: 633 RFVQLNEK 640
>MYB_XENLA (Q08759) Myb protein| Length = 624 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +1 Query: 127 GGWSNFEDQALVVLVHDSG-QNWELVSDAINNIVQFKSVHRQPKECKER 270 G W+ EDQ ++ LVH G + W +++ + R K+C+ER Sbjct: 90 GPWTKEEDQRVIELVHKYGPKRWSVIAKHLKG--------RIGKQCRER 130
>BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C)| Length = 786 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +1 Query: 127 GGWSNFEDQALVVLVHDSGQNWELVSDAINNIVQFKSVHRQPK 255 GG + E A ++ DS ++W V DA+ N+ S + +PK Sbjct: 358 GGDLSLEKNAEYEVIDDSQEHWWKVKDALGNVGYIPSNYVKPK 400
>ATP6_TRIRU (Q36835) ATP synthase a chain precursor (EC 3.6.3.14) (ATPase| protein 6) Length = 255 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +2 Query: 221 LCSSSLYIDNLKNAKSAIGFWWIKALVMVLTVQKTLVHPNSIIS 352 L S ++ I NLK + + GF+ I + +++LT+ + + N +IS Sbjct: 18 LFSLNINIINLKMSLTNFGFYIIISTIIILTLHLLITYNNKLIS 61
>YN95_YEAST (P53752) Putative 49.7 kDa membrane glycoprotein in BIO3-HXT17| intergenic region Length = 436 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 12/48 (25%) Frame = +1 Query: 148 DQALVVLVHDSGQNWELVSDAINNIVQ------------FKSVHRQPK 255 D +V + DSG+NWE V + +I++ F S+H PK Sbjct: 52 DNQVVWISSDSGENWEAVKEIEGHILELIVDPLHGQDRAFVSIHLSPK 99
>CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-like protein)| (Pombe Cdc5-related protein) Length = 802 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +1 Query: 115 MSSGGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 M GG W N ED+ L V G+N W ++ ++ + K+CK R Sbjct: 5 MIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH--------RKSAKQCKAR 49
>CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5-like protein)| Length = 802 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +1 Query: 115 MSSGGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 M GG W N ED+ L V G+N W ++ ++ + K+CK R Sbjct: 5 MIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH--------RKSAKQCKAR 49
>CDC5L_HUMAN (Q99459) Cell division cycle 5-like protein (Cdc5-like protein)| (Pombe cdc5-related protein) Length = 802 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +1 Query: 115 MSSGGGWSNFEDQALVVLVHDSGQN-WELVSDAINNIVQFKSVHRQPKECKER 270 M GG W N ED+ L V G+N W ++ ++ + K+CK R Sbjct: 5 MIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLH--------RKSAKQCKAR 49
>SC6A1_RAT (P23978) Sodium- and chloride-dependent GABA transporter 1| Length = 599 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 399 SLEQLPGATLWNARYGEMIL-LG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELH 223 ++ QLP + LW + M+L LG FCTV A + + P RL R EL Sbjct: 371 AVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYP-------RLLRNRRELF 423 Query: 222 NVIDCI 205 CI Sbjct: 424 IAAVCI 429
>SC6A1_MOUSE (P31648) Sodium- and chloride-dependent GABA transporter 1| Length = 599 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 399 SLEQLPGATLWNARYGEMIL-LG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELH 223 ++ QLP + LW + M+L LG FCTV A + + P RL R EL Sbjct: 371 AVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYP-------RLLRNRRELF 423 Query: 222 NVIDCI 205 CI Sbjct: 424 IAAVCI 429
>SC6A1_HUMAN (P30531) Sodium- and chloride-dependent GABA transporter 1| Length = 599 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = -3 Query: 399 SLEQLPGATLWNARYGEMIL-LG*TRVFCTVSTITRAFIHQNPMALFAFFRLSMYRLELH 223 ++ QLP + LW + M+L LG FCTV A + + P RL R EL Sbjct: 371 AVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYP-------RLLRNRRELF 423 Query: 222 NVIDCI 205 CI Sbjct: 424 IAAVCI 429
>HDA10_HUMAN (Q969S8) Histone deacetylase 10 (HD10)| Length = 669 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%) Frame = -2 Query: 211 LHRLLIPNFDPSHGQGQQ---EPDPRSL 137 LHR+L+ ++D HGQG Q E DP L Sbjct: 163 LHRILVVDWDVHHGQGIQYLFEDDPSVL 190
>RPOA_CYAME (Q85FU3) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase alpha subunit) (RNA polymerase alpha subunit) Length = 316 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Frame = +2 Query: 236 LYIDNLKNAKSAIGFWWIKALVMVLTVQKTL---VHPNSIISPYLAFHRVA 379 L ID + + FW KALV + V K L + N ISP A H+ A Sbjct: 169 LPIDGVFMPVKRVNFWVDKALVDKVLVDKALHLEIWTNGSISPQEALHQAA 219
>MYBH_DICDI (P34127) Myb-like protein (Fragment)| Length = 451 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 103 KALKMSSGGGWSNFEDQALVVLVHDSGQ-NWELVSDAINNIVQFKSVHRQPK 255 K K + G W++ EDQ L+ V+ Q NW+ +++ + + HR K Sbjct: 142 KVEKKKTKGKWTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDVQCHHRYQK 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,945,403 Number of Sequences: 219361 Number of extensions: 1007805 Number of successful extensions: 2555 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2528 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2555 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
