>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 230    tctagtggttgatttgctggag 251
              ||||||||||||||||||||||
Sbjct: 776230 tctagtggttgatttgctggag 776251

>gb|AC153583.10| Mus musculus 6 BAC RP23-349K15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196821

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 207    gtgacatttgtatttctgggt 227
              |||||||||||||||||||||
Sbjct: 157729 gtgacatttgtatttctgggt 157709

>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence
          Length = 452156

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      catgagcagagcacagtagcc 25
              |||||||||||||||||||||
Sbjct: 181629 catgagcagagcacagtagcc 181609

>emb|AL118496.22|HSJ136J15 Human DNA sequence from clone RP1-136J15 on chromosome Xq23-24 Contains
             a mitofusin 1 (MFN1) pseudogene, the KCNE1L gene for
             potassium voltage-gated channel, Isk-related family,
             member 1-like, the 3' end of the FACL4 gene for
             fatty-acid-Coenzyme A ligase long-chain 4, a novel gene
             and two CpG islands, complete sequence
          Length = 125465

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   tgatttgctggagaatttgga 259
             |||||||||||||||||||||
Sbjct: 25264 tgatttgctggagaatttgga 25284

>gb|AC117462.5| Homo sapiens 3 BAC RP11-354H21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146853

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    tgatttgctggagaatttgga 259
              |||||||||||||||||||||
Sbjct: 114199 tgatttgctggagaatttgga 114179

>gb|AC153918.4| Mus musculus  BAC RP23-89M16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232574

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    gtgacatttgtatttctgggt 227
              |||||||||||||||||||||
Sbjct: 175337 gtgacatttgtatttctgggt 175357

>gb|AY529462.1| Mycoplasma capricolum subsp. capripneumoniae Mg2+ transport ATPase
            gene, partial cds; arcA pseudogene, complete sequence;
            ArcB gene, complete cds; arcD pseudogene, complete
            sequence; glucokinase gene, complete cds; and
            hypothetical protein gene, partial cds
          Length = 7109

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  gatttgctggagaatttgga 259
            ||||||||||||||||||||
Sbjct: 6186 gatttgctggagaatttgga 6167

>gb|DQ068385.1| Hypocrea jecorina hexokinase (hxk1) gene, complete cds
          Length = 2340

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   caccgctgccatcctcggct 110
            ||||||||||||||||||||
Sbjct: 2232 caccgctgccatcctcggct 2213

>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence
          Length = 232228

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    tgacatttgtatttctgggt 227
              ||||||||||||||||||||
Sbjct: 149021 tgacatttgtatttctgggt 149002

>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gctagagcttctccatcccc 127
             ||||||||||||||||||||
Sbjct: 78398 gctagagcttctccatcccc 78379

>gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome 16, complete sequence
          Length = 188081

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tgacatttgtatttctgggt 227
             ||||||||||||||||||||
Sbjct: 28051 tgacatttgtatttctgggt 28032

>dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete sequence
          Length = 80610

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    cagtcgccggcaccgctgcc 100
             ||||||||||||||||||||
Sbjct: 62653 cagtcgccggcaccgctgcc 62634

>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    gatttgctggagaatttgga 259
              ||||||||||||||||||||
Sbjct: 110721 gatttgctggagaatttgga 110702

>gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, complete sequence
          Length = 80609

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    cagtcgccggcaccgctgcc 100
             ||||||||||||||||||||
Sbjct: 62652 cagtcgccggcaccgctgcc 62633

>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete
              sequence
          Length = 213495

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    gtgacatttgtatttctggg 226
              ||||||||||||||||||||
Sbjct: 132981 gtgacatttgtatttctggg 133000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,584,460
Number of Sequences: 3902068
Number of extensions: 2584460
Number of successful extensions: 43572
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43534
Number of HSP's gapped (non-prelim): 38
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)