ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl15g06 |
|---|---|
| Clone Library Name | barley_pub |
>FABH1_BACCR (Q81GM0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1) Length = 310 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -1 Query: 235 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 E++ G+ +DGD+ + +G G GG +W + LRW Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308
>FABH1_BACAN (Q81JG0) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 1) (Beta-ketoacyl-ACP synthase III 1) (KAS III 1) Length = 310 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -1 Query: 235 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 E++ G+ +DGD+ + +G G GG +W + LRW Sbjct: 278 ELQNGRIQDGDLIILVGFG---GGLTWGAVALRW 308
>MTSM_SERMA (P14230) Modification methylase SmaI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase SmaI) (M.SmaI) Length = 292 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -1 Query: 235 EVRRGQKKDGDMGVGIGDGECAGGTSW 155 +VRR K DG + + IGD +GG +W Sbjct: 84 DVRRTLKDDGTLWLNIGDSYTSGGRTW 110
>FABH_OCEIH (Q8ERU6) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 312 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 Query: 232 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 V+ G+ KD D+ V +G G GG +W + LRW Sbjct: 281 VKEGKIKDNDLIVLVGFG---GGLTWGAVALRW 310
>FABH_STAS1 (Q49WB6) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 313 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -1 Query: 235 EVRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 E+ G+ KD D+ V +G G GG +W + LRW Sbjct: 281 ELENGRIKDDDVLVLVGFG---GGLTWGAVTLRW 311
>FABH_LISMO (Q8Y573) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 312 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 232 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 V G+ KD D + +G G GG +W L++RW Sbjct: 281 VEEGRIKDNDNVLLVGFG---GGLTWGALIIRW 310
>FABH_LISMF (Q71XG3) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 312 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 232 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 V G+ KD D + +G G GG +W L++RW Sbjct: 281 VEEGRIKDNDNVLLVGFG---GGLTWGALIIRW 310
>FABH_LISIN (Q929H1) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 312 Score = 27.7 bits (60), Expect = 7.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 232 VRRGQKKDGDMGVGIGDGECAGGTSWWVLLLRW 134 V G+ KD D + +G G GG +W L++RW Sbjct: 281 VEEGRIKDNDNVLLVGFG---GGLTWGALIIRW 310
>ARLY_GEOKA (Q5KW95) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 459 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +2 Query: 182 VANADAHVAVLLLTPTHLERAQP 250 VA A+ HV ++ THL+RAQP Sbjct: 140 VAQAEKHVETIMPGYTHLQRAQP 162 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.125 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,801,804 Number of Sequences: 219361 Number of extensions: 355831 Number of successful extensions: 1401 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1401 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
