>PK1L1_HUMAN (Q8TDX9) Polycystic kidney disease 1-like 1 protein|
           (Polycystin-1L1)
          Length = 2849

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 12  KEEKPTKQMENRVPL--SSEFPTPPISYSAA*FALPRRSNLTASTGVASI 155
           K  +PT+    RVPL   S FPT P S       +PR  + TAS   + I
Sbjct: 220 KVARPTQTSSQRVPLWPISHFPTSPRSSHGLPPGIPRTPSFTASQSGSEI 269

>MEF2A_XENLA (Q03414) Myocyte-specific enhancer factor 2A homolog (Serum|
           response factor-like protein 2) (SL-2)
          Length = 516

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 43  IGCRSPPNSQPPQ*VTPQ-LSSHSHADQISQPAQE*LA*HSSSIIGSD 183
           I  +S P S P   +TP    SH H     +P  + L+  SSS  GSD
Sbjct: 431 INIKSEPISPPRDRITPSGFQSHQHHQHQPRPEMDSLSSSSSSYDGSD 478

>URT1_DESRO (P98119) Salivary plasminogen activator alpha 1 precursor (EC|
           3.4.21.68) (DSPA alpha-1)
          Length = 477

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 161 ECYASYSCAGCEI*SAWECELSCGVTYWGGWEFGGER 51
           +C A Y+   CE+ +   C    GVTY G W     R
Sbjct: 110 QCPAGYTGKRCEVDTRATCYEGQGVTYRGTWSTAESR 146

>EFS_MOUSE (Q64355) Embryonal Fyn-associated substrate (SRC-interacting|
           protein) (Signal-integrating protein)
          Length = 560

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 196 PQPPLP*IALRCTSLPSARSLPARSAPPR 282
           P  P P +A   T L +   LP RS+PP+
Sbjct: 262 PPSPEPPVASSSTDLDTVAQLPTRSSPPQ 290

>PGCB_RAT (P55068) Brevican core protein precursor (Brain-enriched|
           hyaluronan-binding protein) (BEHAB protein) [Contains:
           Brevican core protein isoform 1; Brevican core protein
           isoform 2]
          Length = 883

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 60  RRAAPDFPFVSWVFL 16
           RRAAP FP V W FL
Sbjct: 67  RRAAPGFPRVKWTFL 81

>PGCB_MOUSE (Q61361) Brevican core protein precursor|
          Length = 883

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 60  RRAAPDFPFVSWVFL 16
           RRAAP FP V W FL
Sbjct: 67  RRAAPGFPRVKWTFL 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,434,137
Number of Sequences: 219361
Number of extensions: 607661
Number of successful extensions: 1650
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)