Clone Name | bastl15f10 |
---|---|
Clone Library Name | barley_pub |
>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)| (Dynamin-like protein 6) Length = 914 Score = 78.6 bits (192), Expect = 4e-15 Identities = 40/69 (57%), Positives = 46/69 (66%) Frame = +2 Query: 158 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 337 MEA++ELSQLS+S++Q TFLN V LGNVG+GKSAVLNSLIG Sbjct: 1 MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60 Query: 338 HPVLPTXEN 364 HPVLPT EN Sbjct: 61 HPVLPTGEN 69
>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)| (Dynamin-like protein 3) Length = 920 Score = 76.6 bits (187), Expect = 1e-14 Identities = 40/69 (57%), Positives = 45/69 (65%) Frame = +2 Query: 158 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 337 MEA++ELSQLS+S+RQ T LN V LGNVG+GKSAVLNSLIG Sbjct: 1 MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60 Query: 338 HPVLPTXEN 364 HPVLPT EN Sbjct: 61 HPVLPTGEN 69
>MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor| Length = 903 Score = 34.7 bits (78), Expect = 0.059 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +2 Query: 266 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXEN 364 T + VV+G+ SGKS+VL +++GH LP N Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSN 294
>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein| MGM1 isoform 1; Protein MGM1 isoform 2] Length = 881 Score = 32.7 bits (73), Expect = 0.22 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 266 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXEN 364 T + VV+G+ SGKS+VL S++G LP N Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVGREFLPKGSN 241
>SPN1_SCHPO (O36023) Septin homolog spn1| Length = 469 Score = 31.2 bits (69), Expect = 0.65 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 275 NAVVLGNVGSGKSAVLNSLIGHPVLPTXE 361 N +VLG GSGKS ++N+L+ V P + Sbjct: 97 NVLVLGESGSGKSTLVNTLLNRDVYPPTQ 125
>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)| (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member proline-rich carboxyl-terminal domain less) (Dymple) (Dynamin-related protein 1) (Dynamin-like protein 4) (Dynamin-li Length = 736 Score = 31.2 bits (69), Expect = 0.65 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352 VV+G SGKS+VL SL+G +LP Sbjct: 29 VVVGTQSSGKSSVLESLVGRDLLP 52
>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)| Length = 755 Score = 31.2 bits (69), Expect = 0.65 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352 VV+G SGKS+VL SL+G +LP Sbjct: 29 VVVGTQSSGKSSVLESLVGRDLLP 52
>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related| protein 1) (Dynamin family member proline-rich carboxyl-terminal domain less) (Dymple) Length = 742 Score = 31.2 bits (69), Expect = 0.65 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352 VV+G SGKS+VL SL+G +LP Sbjct: 29 VVVGTQSSGKSSVLESLVGRDLLP 52
>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 11) (ATP-energized glutathione S-conjugate pump 11) Length = 1194 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = +2 Query: 284 VLGNVGSGKSAVLNSLIG 337 V+G VGSGK+++LNSL+G Sbjct: 384 VIGEVGSGKTSLLNSLLG 401
>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 8) (ATP-energized glutathione S-conjugate pump 8) Length = 1466 Score = 30.0 bits (66), Expect = 1.4 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337 +N + G VGSGKS++L+S++G Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651
>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 7) (ATP-energized glutathione S-conjugate pump 7) Length = 1493 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337 +N + G VGSGKS++L+S++G Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674
>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)| (Dynamin-like protein 2a) Length = 808 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352 VV+G+ SGKS+VL +L+G LP Sbjct: 63 VVVGSQSSGKSSVLEALVGRDFLP 86
>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)| Length = 691 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352 V+G SGKS+VL SL+G +LP Sbjct: 30 VVGTQSSGKSSVLESLVGRDLLP 52
>GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-associated| nucleotide 4-like 1 protein) (Immunity-associated protein 3) (IAN-5) Length = 307 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346 L +++G G GKSA NS++G PV Sbjct: 28 LRIILVGKTGCGKSATGNSILGQPV 52
>ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)| Length = 359 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 Query: 287 LGNVGSGKSAVLNSLIGHPVLPTXE 361 LG+ G+GKS ++NSL+G + T E Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224
>ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)| Length = 359 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 Query: 287 LGNVGSGKSAVLNSLIGHPVLPTXE 361 LG+ G+GKS ++NSL+G + T E Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224
>ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)| Length = 346 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPTXE 361 V+LG+ G GKS+ +NSL G ++ T E Sbjct: 187 VLLGSSGVGKSSFINSLAGADLMKTSE 213
>ERA_BORBU (O51604) GTP-binding protein era homolog| Length = 290 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +2 Query: 278 AVVLGNVGSGKSAVLNSLIGHPV 346 A +LG +GKS +LNS+ GH + Sbjct: 6 AAILGRPSTGKSTLLNSICGHKI 28
>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 3) (ATP-energized glutathione S-conjugate pump 3) Length = 1514 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337 + V G VGSGKS++L+SL+G Sbjct: 669 MKVAVCGTVGSGKSSLLSSLLG 690
>GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-associated| nucleotide 7 protein) Length = 300 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346 L V++G GSGKSA N+++G + Sbjct: 9 LRIVLVGKTGSGKSATANTILGEEI 33
>ENGC_CLOTE (Q895P5) Probable GTPase engC (EC 3.6.1.-)| Length = 290 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPTXE 361 V+ G G+GKS ++N L+G V+ T + Sbjct: 159 VLCGPSGAGKSTIINKLVGKDVMETGQ 185
>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)| Length = 780 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +2 Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352 V+G+ SGKS+VL +L+G LP Sbjct: 48 VVGSQSSGKSSVLEALVGRDFLP 70
>ABCX_CYACA (Q9TLX1) Probable ATP-dependent transporter ycf16| Length = 254 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHP 343 V++G GSGKS++L + GHP Sbjct: 36 VIMGPNGSGKSSLLKVIAGHP 56
>MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 10) (ATP-energized glutathione S-conjugate pump 10) Length = 1539 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +2 Query: 278 AVVLGNVGSGKSAVLNSLIG 337 A ++G VGSGKS++L S++G Sbjct: 670 AAIVGTVGSGKSSLLASVLG 689
>GIMA4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-associated protein| 4) (Immunity-associated nucleotide 1 protein) Length = 219 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346 L V+LG G+GKS+ NS++G V Sbjct: 31 LRIVLLGKTGAGKSSTGNSILGEKV 55
>GIMA4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-associated protein| 4) (Immunity-associated nucleotide 1 protein) (hIAN1) Length = 329 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346 L V++G G+GKSA NS++G V Sbjct: 31 LRIVLVGKTGAGKSATGNSILGRKV 55
>DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)| Length = 757 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +2 Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352 V+G+ SGKS++L +L+G LP Sbjct: 33 VVGSQSSGKSSILETLVGRDFLP 55
>ENGC_STRAW (Q82LC4) Probable GTPase engC (EC 3.6.1.-)| Length = 370 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +2 Query: 278 AVVLGNVGSGKSAVLNSLIGHPVL 349 +V+LG G+GKS + N+L+G V+ Sbjct: 208 SVLLGQSGAGKSTLANALLGEDVM 231
>YOR6_CALSR (P40983) Hypothetical protein in xynA 3'region (ORF6) (Fragment)| Length = 402 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPT 355 VVLG GKS ++N ++G +LPT Sbjct: 51 VVLGQFKRGKSTLINYMLGANLLPT 75
>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 9) (ATP-energized glutathione S-conjugate pump 9) Length = 1490 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337 + V G VGSGKS++L+S++G Sbjct: 659 MKVAVCGAVGSGKSSLLSSILG 680
>TOC34_PEA (Q41009) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa| chloroplast outer envelope protein) (GTP-binding protein OEP34) (GTP-binding protein IAP34) Length = 310 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPVL 349 L +V+G G GKS+ +NS+IG V+ Sbjct: 40 LTILVMGKGGVGKSSTVNSIIGERVV 65
>ERAL_MOUSE (Q9CZU4) GTP-binding protein era homolog (ERA-W) (Conserved| ERA-like GTPase) (CEGA) Length = 437 Score = 27.3 bits (59), Expect = 9.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPVLPTXE 361 L V+LG +GKS + N L+G V P + Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSK 143
>ENGC_STRCO (Q9ZBT9) Probable GTPase engC (EC 3.6.1.-)| Length = 366 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 278 AVVLGNVGSGKSAVLNSLIGHPVL 349 AV+LG G+GKS + N+L+G + Sbjct: 204 AVLLGQSGAGKSTLANALLGEAAM 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,967,413 Number of Sequences: 219361 Number of extensions: 197426 Number of successful extensions: 1147 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 1141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1147 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)