ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related pr... 79 4e-15
2DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related pr... 77 1e-14
3MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor 35 0.059
4MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Conta... 33 0.22
5SPN1_SCHPO (O36023) Septin homolog spn1 31 0.65
6DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynami... 31 0.65
7DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-... 31 0.65
8DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynami... 31 0.65
9MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 ... 30 1.4
10MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (E... 30 1.4
11MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (E... 30 1.9
12DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like pr... 30 1.9
13DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5) 30 1.9
14GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-asso... 30 1.9
15ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-) 29 2.5
16ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-) 29 2.5
17ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-) 29 3.2
18ERA_BORBU (O51604) GTP-binding protein era homolog 29 3.2
19MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (E... 29 3.2
20GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-asso... 28 4.2
21ENGC_CLOTE (Q895P5) Probable GTPase engC (EC 3.6.1.-) 28 5.5
22DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like pr... 28 5.5
23ABCX_CYACA (Q9TLX1) Probable ATP-dependent transporter ycf16 28 5.5
24MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 ... 28 7.2
25GIMA4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-asso... 28 7.2
26GIMA4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-asso... 28 7.2
27DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5) 28 7.2
28ENGC_STRAW (Q82LC4) Probable GTPase engC (EC 3.6.1.-) 28 7.2
29YOR6_CALSR (P40983) Hypothetical protein in xynA 3'region (ORF6)... 27 9.4
30MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (E... 27 9.4
31TOC34_PEA (Q41009) Translocase of chloroplast 34 (EC 3.6.5.-) (3... 27 9.4
32ERAL_MOUSE (Q9CZU4) GTP-binding protein era homolog (ERA-W) (Con... 27 9.4
33ENGC_STRCO (Q9ZBT9) Probable GTPase engC (EC 3.6.1.-) 27 9.4

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = +2

Query: 158 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 337
           MEA++ELSQLS+S++Q                    TFLN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMKQAASLLADEDPDETSSSKRPATFLNVVALGNVGAGKSAVLNSLIG 60

Query: 338 HPVLPTXEN 364
           HPVLPT EN
Sbjct: 61  HPVLPTGEN 69



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>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 40/69 (57%), Positives = 45/69 (65%)
 Frame = +2

Query: 158 MEAMEELSQLSESIRQXXXXXXXXXXXXXXXXXXXXTFLNAVVLGNVGSGKSAVLNSLIG 337
           MEA++ELSQLS+S+RQ                    T LN V LGNVG+GKSAVLNSLIG
Sbjct: 1   MEAIDELSQLSDSMRQAASLLADEDPDETSSSRRPATSLNVVALGNVGAGKSAVLNSLIG 60

Query: 338 HPVLPTXEN 364
           HPVLPT EN
Sbjct: 61  HPVLPTGEN 69



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>MSP1_SCHPO (P87320) Protein msp1, mitochondrial precursor|
          Length = 903

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 266 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXEN 364
           T  + VV+G+  SGKS+VL +++GH  LP   N
Sbjct: 262 TLPSIVVIGSQSSGKSSVLEAIVGHEFLPKGSN 294



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>MGM1_YEAST (P32266) Protein MGM1, mitochondrial precursor [Contains: Protein|
           MGM1 isoform 1; Protein MGM1 isoform 2]
          Length = 881

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 266 TFLNAVVLGNVGSGKSAVLNSLIGHPVLPTXEN 364
           T  + VV+G+  SGKS+VL S++G   LP   N
Sbjct: 209 TLPSIVVIGSQSSGKSSVLESIVGREFLPKGSN 241



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>SPN1_SCHPO (O36023) Septin homolog spn1|
          Length = 469

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 275 NAVVLGNVGSGKSAVLNSLIGHPVLPTXE 361
           N +VLG  GSGKS ++N+L+   V P  +
Sbjct: 97  NVLVLGESGSGKSTLVNTLLNRDVYPPTQ 125



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>DNM1L_HUMAN (O00429) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
           (Dnm1p/Vps1p-like protein) (DVLP) (Dynamin family member
           proline-rich carboxyl-terminal domain less) (Dymple)
           (Dynamin-related protein 1) (Dynamin-like protein 4)
           (Dynamin-li
          Length = 736

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352
           VV+G   SGKS+VL SL+G  +LP
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLP 52



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>DNM1L_RAT (O35303) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-like protein)|
          Length = 755

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352
           VV+G   SGKS+VL SL+G  +LP
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLP 52



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>DNM1L_MOUSE (Q8K1M6) Dynamin-1-like protein (EC 3.6.5.5) (Dynamin-related|
           protein 1) (Dynamin family member proline-rich
           carboxyl-terminal domain less) (Dymple)
          Length = 742

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352
           VV+G   SGKS+VL SL+G  +LP
Sbjct: 29  VVVGTQSSGKSSVLESLVGRDLLP 52



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>MRP11_ARATH (Q9SKX0) Multidrug resistance-associated protein 11 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 11)
           (ATP-energized glutathione S-conjugate pump 11)
          Length = 1194

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 284 VLGNVGSGKSAVLNSLIG 337
           V+G VGSGK+++LNSL+G
Sbjct: 384 VIGEVGSGKTSLLNSLLG 401



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>MRP8_ARATH (Q8VZZ4) Multidrug resistance-associated protein 8 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 8)
           (ATP-energized glutathione S-conjugate pump 8)
          Length = 1466

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337
           +N  + G VGSGKS++L+S++G
Sbjct: 630 MNVAICGTVGSGKSSLLSSILG 651



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>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 7)
           (ATP-energized glutathione S-conjugate pump 7)
          Length = 1493

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337
           +N  + G VGSGKS++L+S++G
Sbjct: 653 MNIAICGTVGSGKSSLLSSILG 674



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>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)|
           (Dynamin-like protein 2a)
          Length = 808

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLP 352
           VV+G+  SGKS+VL +L+G   LP
Sbjct: 63  VVVGSQSSGKSSVLEALVGRDFLP 86



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>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)|
          Length = 691

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352
           V+G   SGKS+VL SL+G  +LP
Sbjct: 30  VVGTQSSGKSSVLESLVGRDLLP 52



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>GIMA5_HUMAN (Q96F15) GTPase, IMAP family member 5 (Immunity-associated|
           nucleotide 4-like 1 protein) (Immunity-associated
           protein 3) (IAN-5)
          Length = 307

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346
           L  +++G  G GKSA  NS++G PV
Sbjct: 28  LRIILVGKTGCGKSATGNSILGQPV 52



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>ENGC_LEPIN (Q8EZ61) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 287 LGNVGSGKSAVLNSLIGHPVLPTXE 361
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224



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>ENGC_LEPIC (Q72MK0) Probable GTPase engC (EC 3.6.1.-)|
          Length = 359

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 287 LGNVGSGKSAVLNSLIGHPVLPTXE 361
           LG+ G+GKS ++NSL+G  +  T E
Sbjct: 200 LGSSGAGKSTIINSLLGGEIQKTNE 224



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>ENGC2_LISIN (Q92C22) Probable GTPase engC 2 (EC 3.6.1.-)|
          Length = 346

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPTXE 361
           V+LG+ G GKS+ +NSL G  ++ T E
Sbjct: 187 VLLGSSGVGKSSFINSLAGADLMKTSE 213



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>ERA_BORBU (O51604) GTP-binding protein era homolog|
          Length = 290

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 278 AVVLGNVGSGKSAVLNSLIGHPV 346
           A +LG   +GKS +LNS+ GH +
Sbjct: 6   AAILGRPSTGKSTLLNSICGHKI 28



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>MRP3_ARATH (Q9LK64) Multidrug resistance-associated protein 3 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 3)
           (ATP-energized glutathione S-conjugate pump 3)
          Length = 1514

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337
           +   V G VGSGKS++L+SL+G
Sbjct: 669 MKVAVCGTVGSGKSSLLSSLLG 690



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>GIMA7_HUMAN (Q8NHV1) GTPase, IMAP family member 7 (Immunity-associated|
           nucleotide 7 protein)
          Length = 300

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346
           L  V++G  GSGKSA  N+++G  +
Sbjct: 9   LRIVLVGKTGSGKSATANTILGEEI 33



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>ENGC_CLOTE (Q895P5) Probable GTPase engC (EC 3.6.1.-)|
          Length = 290

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPTXE 361
           V+ G  G+GKS ++N L+G  V+ T +
Sbjct: 159 VLCGPSGAGKSTIINKLVGKDVMETGQ 185



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>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)|
          Length = 780

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +2

Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352
           V+G+  SGKS+VL +L+G   LP
Sbjct: 48  VVGSQSSGKSSVLEALVGRDFLP 70



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>ABCX_CYACA (Q9TLX1) Probable ATP-dependent transporter ycf16|
          Length = 254

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHP 343
           V++G  GSGKS++L  + GHP
Sbjct: 36  VIMGPNGSGKSSLLKVIAGHP 56



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>MRP10_ARATH (Q9LZJ5) Multidrug resistance-associated protein 10 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 10)
           (ATP-energized glutathione S-conjugate pump 10)
          Length = 1539

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +2

Query: 278 AVVLGNVGSGKSAVLNSLIG 337
           A ++G VGSGKS++L S++G
Sbjct: 670 AAIVGTVGSGKSSLLASVLG 689



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>GIMA4_MOUSE (Q99JY3) GTPase, IMAP family member 4 (Immunity-associated protein|
           4) (Immunity-associated nucleotide 1 protein)
          Length = 219

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346
           L  V+LG  G+GKS+  NS++G  V
Sbjct: 31  LRIVLLGKTGAGKSSTGNSILGEKV 55



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>GIMA4_HUMAN (Q9NUV9) GTPase, IMAP family member 4 (Immunity-associated protein|
           4) (Immunity-associated nucleotide 1 protein) (hIAN1)
          Length = 329

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPV 346
           L  V++G  G+GKSA  NS++G  V
Sbjct: 31  LRIVLVGKTGAGKSATGNSILGRKV 55



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>DNM1_YEAST (P54861) Dynamin-related protein DNM1 (EC 3.6.5.5)|
          Length = 757

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 284 VLGNVGSGKSAVLNSLIGHPVLP 352
           V+G+  SGKS++L +L+G   LP
Sbjct: 33  VVGSQSSGKSSILETLVGRDFLP 55



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>ENGC_STRAW (Q82LC4) Probable GTPase engC (EC 3.6.1.-)|
          Length = 370

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 278 AVVLGNVGSGKSAVLNSLIGHPVL 349
           +V+LG  G+GKS + N+L+G  V+
Sbjct: 208 SVLLGQSGAGKSTLANALLGEDVM 231



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>YOR6_CALSR (P40983) Hypothetical protein in xynA 3'region (ORF6) (Fragment)|
          Length = 402

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 281 VVLGNVGSGKSAVLNSLIGHPVLPT 355
           VVLG    GKS ++N ++G  +LPT
Sbjct: 51  VVLGQFKRGKSTLINYMLGANLLPT 75



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>MRP9_ARATH (Q9M1C7) Multidrug resistance-associated protein 9 (EC 3.6.3.44)|
           (Glutathione S-conjugate transporting ATPase 9)
           (ATP-energized glutathione S-conjugate pump 9)
          Length = 1490

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIG 337
           +   V G VGSGKS++L+S++G
Sbjct: 659 MKVAVCGAVGSGKSSLLSSILG 680



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>TOC34_PEA (Q41009) Translocase of chloroplast 34 (EC 3.6.5.-) (34 kDa|
           chloroplast outer envelope protein) (GTP-binding protein
           OEP34) (GTP-binding protein IAP34)
          Length = 310

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPVL 349
           L  +V+G  G GKS+ +NS+IG  V+
Sbjct: 40  LTILVMGKGGVGKSSTVNSIIGERVV 65



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>ERAL_MOUSE (Q9CZU4) GTP-binding protein era homolog (ERA-W) (Conserved|
           ERA-like GTPase) (CEGA)
          Length = 437

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 272 LNAVVLGNVGSGKSAVLNSLIGHPVLPTXE 361
           L  V+LG   +GKS + N L+G  V P  +
Sbjct: 114 LRVVLLGAPNAGKSTLSNQLLGRKVFPVSK 143



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>ENGC_STRCO (Q9ZBT9) Probable GTPase engC (EC 3.6.1.-)|
          Length = 366

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 278 AVVLGNVGSGKSAVLNSLIGHPVL 349
           AV+LG  G+GKS + N+L+G   +
Sbjct: 204 AVLLGQSGAGKSTLANALLGEAAM 227


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,967,413
Number of Sequences: 219361
Number of extensions: 197426
Number of successful extensions: 1147
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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