>emb|AL929422.6| Mouse DNA sequence from clone RP24-234H23 on chromosome 4, complete
             sequence
          Length = 52881

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    cagctctgcaaagctgtcctc 52
             |||||||||||||||||||||
Sbjct: 22583 cagctctgcaaagctgtcctc 22603

>ref|NM_125582.2| Arabidopsis thaliana DNA binding / transcription factor AT5G61890
           mRNA, complete cds
          Length = 913

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gcaagattatgccagattct 176
           ||||||||||||||||||||
Sbjct: 850 gcaagattatgccagattct 869

>gb|AC185999.2| Pan troglodytes BAC clone CH251-186C12 from chromosome 9, complete
              sequence
          Length = 169499

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 118    ttgaaataactcaccaaatttcac 141
              |||| |||||||||||||||||||
Sbjct: 126445 ttgatataactcaccaaatttcac 126422

>gb|AY560862.1| Arabidopsis thaliana putative AP2/EREBP transcription factor
           (At5g61890) mRNA, complete cds
          Length = 747

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 gcaagattatgccagattct 176
           ||||||||||||||||||||
Sbjct: 684 gcaagattatgccagattct 703

>gb|AC161121.3| Pan troglodytes BAC clone CH251-720M8 from chromosome 7, complete
             sequence
          Length = 183573

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   ttaaatctaaggacattgaaataa 126
             |||||| |||||||||||||||||
Sbjct: 78252 ttaaatgtaaggacattgaaataa 78229

>gb|AC135669.5| Mus musculus BAC clone RP23-360L22 from chromosome 10, complete
             sequence
          Length = 194398

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ctctgcaaagctgtcctctg 54
             ||||||||||||||||||||
Sbjct: 40721 ctctgcaaagctgtcctctg 40740

>gb|AC084381.6| Homo sapiens BAC clone RP11-20K20 from 7, complete sequence
          Length = 129727

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   ttaaatctaaggacattgaaataa 126
             |||||| |||||||||||||||||
Sbjct: 85029 ttaaatgtaaggacattgaaataa 85006

>gb|AY223270.1| Schistosoma japonicum clone ZZD472 mRNA sequence
          Length = 1082

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 gtacatcacataaggatact 356
           ||||||||||||||||||||
Sbjct: 542 gtacatcacataaggatact 523

>emb|BX649597.2| Human DNA sequence from clone RP11-186G6 on chromosome 9 Contains a
             pseudogene similar to part of recombining binding protein
             suppressor of hairless (Drosophila) (RBPSUH), a RAB28,
             member RAS oncogene family (RAB28) pseudogene, a
             pseudogene similar to part of ATP synthase, H+
             transporting, mitochondrial F1 complex, alpha subunit,
             isoform 1, cardiac muscle (ATP5A1), a novel pseudogene and
             a FK506 binding protein 4, 59kDa (FKBP4) pseudogene,
             complete sequence
          Length = 165995

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   ttgaaataactcaccaaatttcac 141
             |||| |||||||||||||||||||
Sbjct: 43389 ttgatataactcaccaaatttcac 43366

>emb|AL162415.16| Human DNA sequence from clone RP11-286O1 on chromosome 9 Contains a
              pseudogene similar to part of contactin associated
              protein-like family, a FK506 binding protein 4, 59kDa
              (FKBP4) pseudogene, a pseudogene similar to part of NAD(P)
              dependent steroid dehydrogenase-like (HSPC105) and
              pseudogene similar to part of ATP synthase, H+
              transporting, mitochondrial F1 complex, alpha subunit
              family, complete sequence
          Length = 169667

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 118    ttgaaataactcaccaaatttcac 141
              |||| |||||||||||||||||||
Sbjct: 160647 ttgatataactcaccaaatttcac 160670

>gb|AC124785.7| Rattus norvegicus 4 BAC CH230-141I8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 61619

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   ctaaggacattgaaataact 128
             ||||||||||||||||||||
Sbjct: 40040 ctaaggacattgaaataact 40059

>emb|AL663071.5| Mouse DNA sequence from clone RP23-446K7 on chromosome 11, complete
            sequence
          Length = 205845

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   ttgctgctgttaaatctaag 113
            ||||||||||||||||||||
Sbjct: 8508 ttgctgctgttaaatctaag 8489

>emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 in linkage group 5,
             complete sequence
          Length = 158802

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   accgaaagcgtgcacaacat 309
             ||||||||||||||||||||
Sbjct: 62872 accgaaagcgtgcacaacat 62891

>emb|AL662892.11| Mouse DNA sequence from clone RP23-408L15 on chromosome 11 Contains
             part of a novel gene, a novel gene, a SMT3 (supressor of
             mif two, 3) homolog 1 (S. cerevisiae) (Smt3h1) pseudogene
             and a ribosomal protein S12 (Rps12) pseudogene, complete
             sequence
          Length = 106145

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aactcaccaaatttcacctg 144
             ||||||||||||||||||||
Sbjct: 51855 aactcaccaaatttcacctg 51836

>emb|BX890575.23| Zebrafish DNA sequence from clone CH211-235C4 in linkage group 14,
              complete sequence
          Length = 204730

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    accgaaagcgtgcacaacat 309
              ||||||||||||||||||||
Sbjct: 124916 accgaaagcgtgcacaacat 124935

>emb|BX005389.12| Zebrafish DNA sequence from clone DKEY-10F11 in linkage group 16,
              complete sequence
          Length = 221363

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    accgaaagcgtgcacaacat 309
              ||||||||||||||||||||
Sbjct: 113783 accgaaagcgtgcacaacat 113764

>emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in linkage group 17,
              complete sequence
          Length = 178920

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    accgaaagcgtgcacaacat 309
              ||||||||||||||||||||
Sbjct: 109257 accgaaagcgtgcacaacat 109238

>emb|BX255889.7| Zebrafish DNA sequence from clone CH211-270O7 in linkage group 17,
             complete sequence
          Length = 162918

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   accgaaagcgtgcacaacat 309
             ||||||||||||||||||||
Sbjct: 16231 accgaaagcgtgcacaacat 16212

>gb|AC151582.3| Pan troglodytes BAC clone RP43-3F18 from chromosome 7, complete
             sequence
          Length = 197992

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   ttaaatctaaggacattgaaataa 126
             |||||| |||||||||||||||||
Sbjct: 47285 ttaaatgtaaggacattgaaataa 47308

>gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186321

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ggtaatcagctctgcaaagc 45
              ||||||||||||||||||||
Sbjct: 166981 ggtaatcagctctgcaaagc 167000

>gb|AY569337.1| Pan troglodytes chromosome 10 clone RP43-163C1, complete sequence
          Length = 177228

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 118    ttgaaataactcaccaaatttcac 141
              |||| |||||||||||||||||||
Sbjct: 104298 ttgatataactcaccaaatttcac 104321

>dbj|AB022212.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K22G18
          Length = 45453

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 gcaagattatgccagattct 176
           ||||||||||||||||||||
Sbjct: 889 gcaagattatgccagattct 870

>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence
          Length = 197080

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    cagctctgcaaagctgtcct 51
             ||||||||||||||||||||
Sbjct: 65268 cagctctgcaaagctgtcct 65287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,182,244
Number of Sequences: 3902068
Number of extensions: 3182244
Number of successful extensions: 59763
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59734
Number of HSP's gapped (non-prelim): 29
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)