ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA 70 6e-09
2ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group... 70 6e-09
3dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
4dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 6e-09
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
6dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
7dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
8gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, comple... 50 0.006
9emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 48 0.022
10gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequ... 44 0.35
11gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, comp... 42 1.4
12ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
13ref|NM_010135.1| Mus musculus enabled homolog (Drosophila) (Enah... 42 1.4
14gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
15gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
16gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome ... 42 1.4
17ref|XM_749745.1| Aspergillus fumigatus Af293 hypothetical protei... 42 1.4
18gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosom... 42 1.4
19gb|AC131716.2| Mus musculus BAC clone RP23-183O3 from 5, complet... 42 1.4
20gb|AC022498.18| Homo sapiens 3 BAC RP11-430L16 (Roswell Park Can... 42 1.4
21gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, c... 42 1.4
22gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, c... 42 1.4
23dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
27dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
28dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
29gb|U72523.1|MMU72523 Mus musculus neural variant mena+++ protein... 42 1.4
30gb|U72522.1|MMU72522 Mus musculus neural variant mena++ protein ... 42 1.4
31gb|U72521.1|MMU72521 Mus musculus neural variant mena+ protein (... 42 1.4
32gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
33emb|X69722.1|MMIRS1 M.musculus mRNA for insulin receptor substra... 42 1.4
34dbj|D10727.1|MUSNDPP1 Mus musculus mRNA for NDPP-1 protein, comp... 42 1.4
35ref|NM_187500.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
36ref|NM_196417.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.4
37gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 40 5.4
38ref|XM_867421.1| PREDICTED: Bos taurus similar to MID1 interacti... 40 5.4
39ref|XM_957679.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
40ref|XM_325521.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
41ref|NM_018951.3| Homo sapiens homeobox A10 (HOXA10), transcript ... 40 5.4
42ref|NM_018774.1| Mus musculus polyhomeotic-like 2 (Drosophila) (... 40 5.4
43gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 5.4
44gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.4
45gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.4
46gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, comp... 40 5.4
47emb|X58430.1|HSHOX18 Homo sapiens Hox1.8 gene for homeobox protein 40 5.4
48emb|AJ493263.1|ABA493263 Acipenser baeri partial mRNA for kerati... 40 5.4
49emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene ... 40 5.4
50gb|AC023736.4| Drosophila melanogaster X BAC RP98-4P5 (Roswell P... 40 5.4
51gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.4
52gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of... 40 5.4
53gb|AC004080.2| Homo sapiens PAC clone RP1-170O19 from 7p15-p21, ... 40 5.4
54gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromo... 40 5.4
55gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nippo... 40 5.4
56gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
57gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
58dbj|AK051465.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 5.4
59dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
60gb|AE005133.1| Halobacterium sp. NRC-1 section 164 of 170 of the... 40 5.4
61dbj|AK108185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
62emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.4
63gb|BC057571.1| Mus musculus polyhomeotic-like 2 (Drosophila), mR... 40 5.4
64gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 ... 40 5.4
65gb|U81491.1|MMU81491 Mus musculus polyhomeotic (mPh2) mRNA, comp... 40 5.4
66gb|AC126806.3| Mus musculus BAC clone RP23-158J3 from chromosome... 40 5.4
67gb|BC013971.2| Homo sapiens homeobox A10, transcript variant 1, ... 40 5.4
68gb|BC007600.1| Homo sapiens homeobox A10, mRNA (cDNA clone IMAGE... 40 5.4
69gb|AF040714.1|AF040714 Homo sapiens homeobox protein A10 (HOXA10... 40 5.4
70gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complet... 40 5.4
71emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on ch... 40 5.4
72gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, com... 40 5.4 
>ref|XM_466502.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3112

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
           |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307

                                                          
Query: 304 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttc 350
           ||||||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttc 354



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 91  ccgccgctgcggcttacggctacgcagctctc 122
           |||||||||||||| |||||||||||||||||
Sbjct: 69  ccgccgctgcggctcacggctacgcagctctc 100
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>ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group),
           OSJNBa0016G10.28-1 mRNA
          Length = 3152

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
           |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347

                                                          
Query: 304 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttc 350
           ||||||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttc 394



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 91  ccgccgctgcggcttacggctacgcagctctc 122
           |||||||||||||| |||||||||||||||||
Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
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>dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E12, full
           insert sequence
          Length = 3112

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
           |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 248 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 307

                                                          
Query: 304 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttc 350
           ||||||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 308 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttc 354



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 91  ccgccgctgcggcttacggctacgcagctctc 122
           |||||||||||||| |||||||||||||||||
Sbjct: 69  ccgccgctgcggctcacggctacgcagctctc 100
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>dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141P19, full
           insert sequence
          Length = 3149

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Plus

                                                                       
Query: 244 ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
           |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 288 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 347

                                                          
Query: 304 gggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggttc 350
           ||||||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 348 gggacgtcgtcctcaaggtgaagtatggtgaaactcttaagaggttc 394



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 91  ccgccgctgcggcttacggctacgcagctctc 122
           |||||||||||||| |||||||||||||||||
Sbjct: 109 ccgccgctgcggctcacggctacgcagctctc 140
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 91       ccgccgctgcggcttacggctacgcagctctc 122
                |||||||||||||| |||||||||||||||||
Sbjct: 23006876 ccgccgctgcggctcacggctacgcagctctc 23006845



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                            
Query: 244      ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
                |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 23006697 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 23006638

                                   
Query: 304      gggacgtcgtcgtcaaggt 322
                ||||||||||| |||||||
Sbjct: 23006637 gggacgtcgtcctcaaggt 23006619
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>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 91    ccgccgctgcggcttacggctacgcagctctc 122
             |||||||||||||| |||||||||||||||||
Sbjct: 31273 ccgccgctgcggctcacggctacgcagctctc 31242



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                         
Query: 244   ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
             |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 31094 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 31035

                                
Query: 304   gggacgtcgtcgtcaaggt 322
             ||||||||||| |||||||
Sbjct: 31034 gggacgtcgtcctcaaggt 31016
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0016G10
          Length = 143211

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 91     ccgccgctgcggcttacggctacgcagctctc 122
              |||||||||||||| |||||||||||||||||
Sbjct: 126678 ccgccgctgcggctcacggctacgcagctctc 126647



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                          
Query: 244    ccgccatgtccggcctgagcgcgccgccgttcgacggcctcgcgtcggggcccgacccct 303
              |||| |||||||||| |||| |||||  || ||| || ||||||||| | ||||||   |
Sbjct: 126499 ccgcgatgtccggccggagctcgccgatgtacgaggggctcgcgtcgcgtcccgacgagt 126440

                                 
Query: 304    gggacgtcgtcgtcaaggt 322
              ||||||||||| |||||||
Sbjct: 126439 gggacgtcgtcctcaaggt 126421
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>gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, complete sequence
          Length = 3065

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 82  ccaccaccaccgccgctgcggcttacggctacgcagc 118
           ||||||||||| | ||||||||| |||||||||||||
Sbjct: 15  ccaccaccaccactgctgcggctcacggctacgcagc 51



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 303 tgggacgtcgtcgtcaaggtcaaatatggtgacacacttaagaggtt 349
           |||||||||  | ||||||||||||||||||| || ||||| |||||
Sbjct: 254 tgggacgtcaccttcaaggtcaaatatggtgatacgcttaaaaggtt 300
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 80     cgccaccaccaccgccgctgcggc 103
              ||||||||||||||||||||||||
Sbjct: 301583 cgccaccaccaccgccgctgcggc 301560
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>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 76     cccacgccaccaccaccgccgc 97
              ||||||||||||||||||||||
Sbjct: 185420 cccacgccaccaccaccgccgc 185399
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>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence
          Length = 218929

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     cgccaccaccaccgccgctgc 100
              |||||||||||||||||||||
Sbjct: 196550 cgccaccaccaccgccgctgc 196530
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>ref|XM_479614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 tcgcgtccctcgacgccgccg 141
           |||||||||||||||||||||
Sbjct: 495 tcgcgtccctcgacgccgccg 515
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>ref|NM_010135.1| Mus musculus enabled homolog (Drosophila) (Enah), mRNA
          Length = 2899

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   cgccaccaccaccgccgctgc 100
            |||||||||||||||||||||
Sbjct: 1491 cgccaccaccaccgccgctgc 1511
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>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11,
             complete sequence
          Length = 103615

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    cgccaccaccaccgccgctgc 100
             |||||||||||||||||||||
Sbjct: 12718 cgccaccaccaccgccgctgc 12738
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    cgccaccaccaccgccgctgc 100
             |||||||||||||||||||||
Sbjct: 98791 cgccaccaccaccgccgctgc 98811
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>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence
          Length = 197949

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     cgccaccaccaccgccgctgc 100
              |||||||||||||||||||||
Sbjct: 143835 cgccaccaccaccgccgctgc 143855
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>ref|XM_749745.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g07730)
          partial mRNA
          Length = 321

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 69 actctcccccacgccaccaccaccgccgc 97
          |||| ||||||| ||||||||||||||||
Sbjct: 21 actcccccccacaccaccaccaccgccgc 49
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>gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosome 5, complete sequence
          Length = 154808

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    tgataaaagaggactctagca 37
             |||||||||||||||||||||
Sbjct: 34275 tgataaaagaggactctagca 34255
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>gb|AC131716.2| Mus musculus BAC clone RP23-183O3 from 5, complete sequence
          Length = 223812

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 17     tgataaaagaggactctagca 37
              |||||||||||||||||||||
Sbjct: 158083 tgataaaagaggactctagca 158063
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>gb|AC022498.18| Homo sapiens 3 BAC RP11-430L16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 122437

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    cgccaccaccaccgccgctgc 100
             |||||||||||||||||||||
Sbjct: 60739 cgccaccaccaccgccgctgc 60759
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>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence
          Length = 122319

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 80    cgccaccaccaccgccgctgc 100
             |||||||||||||||||||||
Sbjct: 28734 cgccaccaccaccgccgctgc 28714
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>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence
          Length = 151533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     cgccaccaccaccgccgctgc 100
              |||||||||||||||||||||
Sbjct: 120267 cgccaccaccaccgccgctgc 120247
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 80      cgccaccaccaccgccgctgc 100
               |||||||||||||||||||||
Sbjct: 2463535 cgccaccaccaccgccgctgc 2463515



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 74       cccccacgccaccaccaccgccgc 97
                ||||||||||||| ||||||||||
Sbjct: 13342337 cccccacgccaccgccaccgccgc 13342360
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 121      tcgcgtccctcgacgccgccg 141
                |||||||||||||||||||||
Sbjct: 29365036 tcgcgtccctcgacgccgccg 29365016
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 80       cgccaccaccaccgccgctgc 100
                |||||||||||||||||||||
Sbjct: 18131536 cgccaccaccaccgccgctgc 18131556
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 127     ccctcgacgccgccgccgctg 147
               |||||||||||||||||||||
Sbjct: 5175256 ccctcgacgccgccgccgctg 5175276
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>dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B21, full
           insert sequence
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 tcgcgtccctcgacgccgccg 141
           |||||||||||||||||||||
Sbjct: 495 tcgcgtccctcgacgccgccg 515
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   tcgcgtccctcgacgccgccg 141
             |||||||||||||||||||||
Sbjct: 27958 tcgcgtccctcgacgccgccg 27938
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>gb|U72523.1|MMU72523 Mus musculus neural variant mena+++ protein (Mena) mRNA, complete cds
          Length = 2899

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   cgccaccaccaccgccgctgc 100
            |||||||||||||||||||||
Sbjct: 1491 cgccaccaccaccgccgctgc 1511
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>gb|U72522.1|MMU72522 Mus musculus neural variant mena++ protein (Mena) mRNA, complete cds
          Length = 2854

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   cgccaccaccaccgccgctgc 100
            |||||||||||||||||||||
Sbjct: 1446 cgccaccaccaccgccgctgc 1466
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>gb|U72521.1|MMU72521 Mus musculus neural variant mena+ protein (Mena) mRNA, complete cds
          Length = 2842

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   cgccaccaccaccgccgctgc 100
            |||||||||||||||||||||
Sbjct: 1434 cgccaccaccaccgccgctgc 1454
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 80      cgccaccaccaccgccgctgc 100
               |||||||||||||||||||||
Sbjct: 2463486 cgccaccaccaccgccgctgc 2463466



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 74       cccccacgccaccaccaccgccgc 97
                ||||||||||||| ||||||||||
Sbjct: 13349677 cccccacgccaccgccaccgccgc 13349700
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>emb|X69722.1|MMIRS1 M.musculus mRNA for insulin receptor substrate 1
          Length = 5246

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   cgccaccaccaccgccgctgc 100
            |||||||||||||||||||||
Sbjct: 3845 cgccaccaccaccgccgctgc 3825
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>dbj|D10727.1|MUSNDPP1 Mus musculus mRNA for NDPP-1 protein, complete cds
          Length = 4308

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  cgccaccaccaccgccgctgc 100
           |||||||||||||||||||||
Sbjct: 973 cgccaccaccaccgccgctgc 993
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>ref|NM_187500.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 122  cgcgtccctcgacgccgccgccgc 145
            ||||||| ||||||||||||||||
Sbjct: 1167 cgcgtccatcgacgccgccgccgc 1144
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>ref|NM_196417.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0060A14.7), mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||||||||||| ||||||||||
Sbjct: 531 cccccacgccaccgccaccgccgc 508
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     cgccaccaccaccgccgctg 99
              ||||||||||||||||||||
Sbjct: 183294 cgccaccaccaccgccgctg 183275
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>ref|XM_867421.1| PREDICTED: Bos taurus similar to MID1 interacting G12-like protein
           (LOC615572), mRNA
          Length = 1106

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  cccacgccaccaccaccgcc 95
           ||||||||||||||||||||
Sbjct: 102 cccacgccaccaccaccgcc 121
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>ref|XM_957679.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial
           mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 388 gccaccaccaccgccgctgc 407
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>ref|XM_325521.1| Neurospora crassa OR74A hypothetical protein (NCU05667.1) partial
           mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 388 gccaccaccaccgccgctgc 407
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>ref|NM_018951.3| Homo sapiens homeobox A10 (HOXA10), transcript variant 1, mRNA
          Length = 2648

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||| ||||||||||||||||||
Sbjct: 181 cccccgcgccaccaccaccgccgc 158
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>ref|NM_018774.1| Mus musculus polyhomeotic-like 2 (Drosophila) (Phc2), mRNA
          Length = 3832

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 173 gccaccaccaccgccgctgc 154
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     cctgagcgcgccgccgttcg 276
               ||||||||||||||||||||
Sbjct: 2036917 cctgagcgcgccgccgttcg 2036936
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    ccgctgtccgaggtttccgg 161
              ||||||||||||||||||||
Sbjct: 640270 ccgctgtccgaggtttccgg 640251
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 122     cgcgtccctcgacgccgccgccgc 145
               ||||||| ||||||||||||||||
Sbjct: 9012391 cgcgtccatcgacgccgccgccgc 9012414
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>gb|AC146102.2| Pan troglodytes BAC clone RP43-21L13 from 7, complete sequence
          Length = 191971

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cccccacgccaccaccaccgccgc 97
              ||||| ||||||||||||||||||
Sbjct: 177993 cccccgcgccaccaccaccgccgc 178016
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>emb|X58430.1|HSHOX18 Homo sapiens Hox1.8 gene for homeobox protein
          Length = 3510

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||| ||||||||||||||||||
Sbjct: 655 cccccgcgccaccaccaccgccgc 632
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>emb|AJ493263.1|ABA493263 Acipenser baeri partial mRNA for keratin type IIE (krt2 gene)
          Length = 1835

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   gccaccaccaccgccgctgc 100
            ||||||||||||||||||||
Sbjct: 1412 gccaccaccaccgccgctgc 1393
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>emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene and clpP, cicA, clpX, lon
           genes
          Length = 6710

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 gacgtcgtcgtcaaggtcaa 325
           ||||||||||||||||||||
Sbjct: 298 gacgtcgtcgtcaaggtcaa 317
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>gb|AC023736.4| Drosophila melanogaster X BAC RP98-4P5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 165052

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    cccccacgccaccaccaccgccgc 97
             |||| |||||||||||||||||||
Sbjct: 61730 ccccgacgccaccaccaccgccgc 61753
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    cctcgacgccgccgccgctg 147
              ||||||||||||||||||||
Sbjct: 927911 cctcgacgccgccgccgctg 927892
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>gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of the complete genome
          Length = 10960

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gacgtcgtcgtcaaggtcaa 325
             ||||||||||||||||||||
Sbjct: 10187 gacgtcgtcgtcaaggtcaa 10168
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>gb|AC004080.2| Homo sapiens PAC clone RP1-170O19 from 7p15-p21, complete sequence
          Length = 129355

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    cccccacgccaccaccaccgccgc 97
             ||||| ||||||||||||||||||
Sbjct: 47526 cccccgcgccaccaccaccgccgc 47549
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>gb|AC161061.2| Pan troglodytes BAC clone CH251-489A6 from chromosome 7, complete
              sequence
          Length = 177652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cccccacgccaccaccaccgccgc 97
              ||||| ||||||||||||||||||
Sbjct: 110047 cccccgcgccaccaccaccgccgc 110070
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>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060A14, from chromosome 10, complete sequence
          Length = 151343

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    cccccacgccaccaccaccgccgc 97
             ||||||||||||| ||||||||||
Sbjct: 34714 cccccacgccaccgccaccgccgc 34737
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>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09,
              complete sequence
          Length = 143595

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 122    cgcgtccctcgacgccgccgccgc 145
              ||||||| ||||||||||||||||
Sbjct: 137252 cgcgtccatcgacgccgccgccgc 137275
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>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08,
             complete sequence
          Length = 99910

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 122   cgcgtccctcgacgccgccgccgc 145
             ||||||| ||||||||||||||||
Sbjct: 19427 cgcgtccatcgacgccgccgccgc 19450
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>dbj|AK051465.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130050K19
           product:polyhomeotic-like 2 (Drosophila), full insert
           sequence
          Length = 775

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 277 gccaccaccaccgccgctgc 258
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 122     cgcgtccctcgacgccgccgccgc 145
               ||||||| ||||||||||||||||
Sbjct: 9010226 cgcgtccatcgacgccgccgccgc 9010249
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>gb|AE005133.1| Halobacterium sp. NRC-1 section 164 of 170 of the complete genome
          Length = 12130

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   cgccgccgccgctgtccgag 153
             ||||||||||||||||||||
Sbjct: 10128 cgccgccgccgctgtccgag 10109
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>dbj|AK108185.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-B08, full
           insert sequence
          Length = 1136

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 122 cgcgtccctcgacgccgccgccgc 145
           ||||||| ||||||||||||||||
Sbjct: 616 cgcgtccatcgacgccgccgccgc 593
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    cgccgccgccgctgtccgag 153
              ||||||||||||||||||||
Sbjct: 112871 cgccgccgccgctgtccgag 112852
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>gb|BC057571.1| Mus musculus polyhomeotic-like 2 (Drosophila), mRNA (cDNA clone
           MGC:66958 IMAGE:6410302), complete cds
          Length = 3897

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 219 gccaccaccaccgccgctgc 200
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>gb|AE003443.2| Drosophila melanogaster chromosome X, section 27 of 74 of the complete
              sequence
          Length = 299153

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cccccacgccaccaccaccgccgc 97
              |||| |||||||||||||||||||
Sbjct: 218612 ccccgacgccaccaccaccgccgc 218635
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>gb|U81491.1|MMU81491 Mus musculus polyhomeotic (mPh2) mRNA, complete cds
          Length = 3832

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gccaccaccaccgccgctgc 100
           ||||||||||||||||||||
Sbjct: 173 gccaccaccaccgccgctgc 154
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>gb|AC126806.3| Mus musculus BAC clone RP23-158J3 from chromosome 9, complete sequence
          Length = 202590

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    actctcccccacgccaccaccacc 92
             |||||||||||| |||||||||||
Sbjct: 79767 actctcccccaccccaccaccacc 79744
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>gb|BC013971.2| Homo sapiens homeobox A10, transcript variant 1, mRNA (cDNA clone
           MGC:12859 IMAGE:4107013), complete cds
          Length = 2618

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||| ||||||||||||||||||
Sbjct: 149 cccccgcgccaccaccaccgccgc 126
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>gb|BC007600.1| Homo sapiens homeobox A10, mRNA (cDNA clone IMAGE:3347294),
           complete cds
          Length = 1586

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||| ||||||||||||||||||
Sbjct: 140 cccccgcgccaccaccaccgccgc 117
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>gb|AF040714.1|AF040714 Homo sapiens homeobox protein A10 (HOXA10) gene, complete cds
          Length = 2691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  cccccacgccaccaccaccgccgc 97
           ||||| ||||||||||||||||||
Sbjct: 419 cccccgcgccaccaccaccgccgc 396
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>gb|AC125463.4| Mus musculus BAC clone RP23-106G8 from 8, complete sequence
          Length = 212677

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gccaccaccaccgccgctgc 100
             ||||||||||||||||||||
Sbjct: 16592 gccaccaccaccgccgctgc 16611
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>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete
              sequence
          Length = 174305

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     gccaccaccaccgccgctgc 100
              ||||||||||||||||||||
Sbjct: 167669 gccaccaccaccgccgctgc 167650
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>gb|AC109618.12| Mus musculus chromosome 8, clone RP23-478L3, complete sequence
          Length = 173511

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    gccaccaccaccgccgctgc 100
             ||||||||||||||||||||
Sbjct: 89225 gccaccaccaccgccgctgc 89206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,428,628
Number of Sequences: 3902068
Number of extensions: 3428628
Number of successful extensions: 244022
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 242498
Number of HSP's gapped (non-prelim): 1524
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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