ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl15e08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 93.7 bits (47), Expect = 4e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 293 gcaatggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-ag 351 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 34951838 gcaatggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaag 34951897 Query: 352 gacgggcaagg 362 || |||||||| Sbjct: 34951898 gatgggcaagg 34951908 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gacccctccgcctccgcctcc 61 ||||||||||||||||||||| Sbjct: 12269436 gacccctccgcctccgcctcc 12269456 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cggacgccatggcggcggcggccg 146 ||||| |||||||||||||||||| Sbjct: 25465923 cggacaccatggcggcggcggccg 25465946 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 15392108 cctccgcctccgcctccccc 15392127
>dbj|AK102910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113J04, full insert sequence Length = 3717 Score = 93.7 bits (47), Expect = 4e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 293 gcaatggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-ag 351 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 428 gcaatggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaag 487 Query: 352 gacgggcaagg 362 || |||||||| Sbjct: 488 gatgggcaagg 498
>dbj|AK073897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075A06, full insert sequence Length = 3730 Score = 93.7 bits (47), Expect = 4e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 293 gcaatggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-ag 351 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 450 gcaatggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaag 509 Query: 352 gacgggcaagg 362 || |||||||| Sbjct: 510 gatgggcaagg 520
>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete sequence Length = 84361 Score = 93.7 bits (47), Expect = 4e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 293 gcaatggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-ag 351 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 57220 gcaatggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaag 57279 Query: 352 gacgggcaagg 362 || |||||||| Sbjct: 57280 gatgggcaagg 57290
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 93.7 bits (47), Expect = 4e-16 Identities = 66/71 (92%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 293 gcaatggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-ag 351 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 10890 gcaatggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaag 10949 Query: 352 gacgggcaagg 362 || |||||||| Sbjct: 10950 gatgggcaagg 10960
>ref|XM_474407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3036 Score = 87.7 bits (44), Expect = 2e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 296 atggcgacatataagttgggcgtggaggtcgcaagtgctcatgacctgatgccc-aggac 354 |||||| ||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct: 1 atggcggcatataagttgggtgtggaggttgcaagtgctcatgacctgatgcccaaggat 60 Query: 355 gggcaagg 362 |||||||| Sbjct: 61 gggcaagg 68
>emb|X63756.1|SVPEPCAA S.vulgare PEPC gene Length = 7071 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Minus Query: 123 cggacgccatggcggcggcggccg 146 |||||||||||||||||||||||| Sbjct: 635 cggacgccatggcggcggcggccg 612
>ref|XM_843872.1| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 2 (LOC483430), mRNA Length = 3162 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 43 cccctccgcctccgcctcccccg 65 ||||||||||||||||||||||| Sbjct: 847 cccctccgcctccgcctcccccg 825
>ref|XM_540548.2| PREDICTED: Canis familiaris similar to ankyrin repeat and BTB (POZ) domain containing 2, transcript variant 1 (LOC483430), mRNA Length = 2739 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 43 cccctccgcctccgcctcccccg 65 ||||||||||||||||||||||| Sbjct: 847 cccctccgcctccgcctcccccg 825
>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence Length = 181705 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctcccccg 65 ||||||||||||||||||||||| Sbjct: 128228 cccctccgcctccgcctcccccg 128250
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 110 gccagcccggccacggacgccatggcggcgg 140 |||||||||||||||| | |||||||||||| Sbjct: 1006630 gccagcccggccacggccaccatggcggcgg 1006660
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 gacgccatggcggcggcggccg 146 |||||||||||||||||||||| Sbjct: 794157 gacgccatggcggcggcggccg 794136
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctccccc 64 |||||||||||||||||||||| Sbjct: 10333257 cccctccgcctccgcctccccc 10333278 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 12769222 acccctccgcctccgcctcc 12769241
>ref|XM_843047.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0445) partial mRNA Length = 5175 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gacgccatggcggcggcggccg 146 |||||||||||||||||||||| Sbjct: 1219 gacgccatggcggcggcggccg 1240
>ref|NM_001030849.1| Gallus gallus similar to zinc finger protein 341 (LOC419152), mRNA Length = 3215 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctccccc 64 |||||||||||||||||||||| Sbjct: 555 cccctccgcctccgcctccccc 576
>emb|AJ720232.1| Gallus gallus mRNA for hypothetical protein, clone 13c20 Length = 3215 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctccccc 64 |||||||||||||||||||||| Sbjct: 555 cccctccgcctccgcctccccc 576
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctccccc 64 |||||||||||||||||||||| Sbjct: 46723 cccctccgcctccgcctccccc 46744
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 gacgccatggcggcggcggccg 146 |||||||||||||||||||||| Sbjct: 48980 gacgccatggcggcggcggccg 48959
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 cccctccgcctccgcctccccc 64 |||||||||||||||||||||| Sbjct: 10331358 cccctccgcctccgcctccccc 10331379 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 12765985 acccctccgcctccgcctcc 12766004
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 116 ccggccacggacgccatggcggcggcggcc 145 |||||||||| ||||| ||||||||||||| Sbjct: 1424930 ccggccacggccgccagggcggcggcggcc 1424901
>dbj|AK065012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F04, full insert sequence Length = 1109 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 41 gacccctccgcctccgcctcccccgg 66 ||||||||||||||||||||| |||| Sbjct: 204 gacccctccgcctccgcctccgccgg 179
>dbj|AB070938.1| Streptomyces avermitilis melanin biosynthetic gene cluster Length = 6497 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 116 ccggccacggacgccatggcggcggcggcc 145 |||||||||| ||||| ||||||||||||| Sbjct: 2708 ccggccacggccgccagggcggcggcggcc 2737
>ref|XM_471553.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 546 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gacccctccgcctccgcctcc 61 ||||||||||||||||||||| Sbjct: 101 gacccctccgcctccgcctcc 81
>ref|NM_191826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 20 cctccgcctccgcctcccccg 40
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggacgccatggcggcggcggccgac 148 ||||||||||| ||||||||||||| Sbjct: 104654 ggacgccatggtggcggcggccgac 104630
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 86414 cctccgcctccgcctcccccg 86434
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 17564 cctccgcctccgcctcccccg 17584
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 gacccctccgcctccgcctcc 61 ||||||||||||||||||||| Sbjct: 94318 gacccctccgcctccgcctcc 94338
>gb|AE006020.1| Caulobacter crescentus CB15 section 346 of 359 of the complete genome Length = 10680 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 116 ccggccacggacgccatggcggcggcggc 144 ||||||||| ||||| ||||||||||||| Sbjct: 4499 ccggccacgcacgccttggcggcggcggc 4527
>tpg|BK000053.1| TPA: TPA_exp: Caulobacter crescentus putative NH3-dependent NAD synthetase gene, complete cds; and putative phosphomannoisomerase gene, partial cds Length = 8009 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 116 ccggccacggacgccatggcggcggcggc 144 ||||||||| ||||| ||||||||||||| Sbjct: 6809 ccggccacgcacgccttggcggcggcggc 6781
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 21812130 cctccgcctccgcctcccccg 21812150 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 21629788 cctccgcctccgcctcccccg 21629808 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 15201418 acccctccgcctccgcctcc 15201437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 30173983 cctccgcctccgcctcccccg 30174003 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 cacggacgccatggcggcggcggc 144 ||||||||||||||||| |||||| Sbjct: 40920343 cacggacgccatggcggaggcggc 40920366 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 40126433 acccctccgcctccgcctcc 40126452 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 39844512 cctccgcctccgcctccccc 39844493 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 35760880 cctccgcctccgcctccccc 35760899 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 19844475 cctccgcctccgcctccccc 19844456 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 8445915 cctccgcctccgcctccccc 8445896
>gb|AE009618.1| Brucella melitensis 16M chromosome I, section 175 of 195 of the complete sequence Length = 11869 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 ggacgccatggcggcggcggccgac 148 ||||||||||| ||||||||||||| Sbjct: 7225 ggacgccatggtggcggcggccgac 7249
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 78805 cctccgcctccgcctcccccg 78825
>gb|AC138127.1| Homo sapiens chromosome 19 clone LLNLR-281G7, complete sequence Length = 40616 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 2708 cctccgcctccgcctcccccg 2728
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggacgccatggcggcggcggccgac 148 ||||||||||| ||||||||||||| Sbjct: 106013 ggacgccatggtggcggcggccgac 105989
>dbj|AB099628.1| Rana nigromaculata genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence Length = 4818 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cccgctcccccgcaaccagcc 112 ||||||||||||||||||||| Sbjct: 349 cccgctcccccgcaaccagcc 369
>dbj|AK109735.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C08, full insert sequence Length = 1622 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 142 cctccgcctccgcctcccccg 162
>dbj|AK068240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L15, full insert sequence Length = 1606 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 161 cctccgcctccgcctcccccg 181
>gb|AC005263.1|AC005263 Homo sapiens chromosome 19, cosmid F20489, complete sequence Length = 35737 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 8804 cctccgcctccgcctcccccg 8824
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 ggacgccatggcggcggcggccgac 148 ||||||||||| ||||||||||||| Sbjct: 102381 ggacgccatggtggcggcggccgac 102357
>dbj|AB058717.1| Homo sapiens mRNA for KIAA1814 protein, partial cds Length = 5576 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctcccccg 65 ||||||||||||||||||||| Sbjct: 3481 cctccgcctccgcctcccccg 3501
>ref|XM_481987.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2297 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 122 cctccgcctccgcctccccc 141
>ref|XM_482607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1021 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 175 ccatggcggcggcggccgac 156
>ref|XM_507241.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524F03.27 mRNA Length = 1088 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 234 ccatggcggcggcggccgac 215
>ref|XM_463622.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 195 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 45 acccctccgcctccgcctcc 64
>ref|NM_189924.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1770 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 164 cctccgcctccgcctccccc 183
>ref|NM_190036.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1959 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 cacggacgccatggcggcggcggc 144 ||||||||||||||||| |||||| Sbjct: 1488 cacggacgccatggcggaggcggc 1465
>ref|NM_185544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2130 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 44 cctccgcctccgcctccccc 25
>ref|XM_477422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2347 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 93 cctccgcctccgcctccccc 112
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ccagatccgcccggatctgg 243 |||||||||||||||||||| Sbjct: 63336 ccagatccgcccggatctgg 63355
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ccagatccgcccggatctgg 243 |||||||||||||||||||| Sbjct: 7332 ccagatccgcccggatctgg 7351
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 25963 cctccgcctccgcctccccc 25944
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 95073 cctccgcctccgcctccccc 95092
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 73363 cctccgcctccgcctccccc 73344
>ref|XM_361587.1| Magnaporthe grisea 70-15 hypothetical protein (MG04061.4) partial mRNA Length = 5295 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 3088 cctccgcctccgcctccccc 3107
>ref|XM_364594.1| Magnaporthe grisea 70-15 predicted protein (MG09332.4) partial mRNA Length = 1341 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 392 cctccgcctccgcctccccc 411
>ref|XM_588232.2| PREDICTED: Bos taurus similar to plectin 1 isoform 1 (LOC510991), mRNA Length = 3120 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 22 cctccgcctccgcctccccc 3
>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete sequence Length = 181811 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 98859 cctccgcctccgcctccccc 98878
>ref|XM_656782.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4270.2), mRNA Length = 4455 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 4195 cctccgcctccgcctccccc 4214
>gb|AY350713.1| Capsella rubella clone BAC Cr33L6, complete sequence Length = 74492 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 55024 cctccgcctccgcctccccc 55005
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 acgccatggcggcggcggcc 145 |||||||||||||||||||| Sbjct: 1000069 acgccatggcggcggcggcc 1000050
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 7438 acccctccgcctccgcctcc 7457
>gb|AC006006.2| Homo sapiens PAC clone RP4-813F11 from 7, complete sequence Length = 136385 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 43913 cctccgcctccgcctccccc 43894
>ref|XM_380485.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00309.1) partial mRNA Length = 2274 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 67 cctccgcctccgcctccccc 86
>gb|AY129336.1| Mycobacteriophage Che9d, complete genome Length = 56276 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 cgccatggcggcggcggccgactg 150 |||||||||||||||||| ||||| Sbjct: 3741 cgccatggcggcggcggcggactg 3764
>ref|XM_800512.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053506205.40) partial mRNA Length = 1335 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccaggctctcgtgcgtgccc 175 |||||||||||||||||||| Sbjct: 376 ccaggctctcgtgcgtgccc 357
>gb|AC123841.4| Mus musculus BAC clone RP23-400M7 from chromosome 13, complete sequence Length = 203062 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 agtgctcatgacctgatgcc 348 |||||||||||||||||||| Sbjct: 132277 agtgctcatgacctgatgcc 132258
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 103661 cctccgcctccgcctccccc 103680
>ref|XM_809405.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053507991.20) partial mRNA Length = 1335 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ccaggctctcgtgcgtgccc 175 |||||||||||||||||||| Sbjct: 376 ccaggctctcgtgcgtgccc 357
>gb|AC122445.3| Mus musculus BAC clone RP24-233P3 from chromosome 17, complete sequence Length = 173130 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 162722 cctccgcctccgcctccccc 162741
>emb|AL831784.17| Human DNA sequence from clone RP13-436F16 on chromosome 1 Contains the 5' end of the MMEL2 gene for membrane metallo-endopeptidase-like 2, a novel gene and three CpG islands, complete sequence Length = 79425 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 cctccgcctccgcctcccccggaatccc 72 ||||||||||||||||| ||||| |||| Sbjct: 5692 cctccgcctccgcctccgccggactccc 5665
>emb|AL445189.7| Human DNA sequence from clone RP11-249L21 on chromosome 6 Contains part of a novel gene, a ribosomal protein S12 (RPS12) pseudogene, the 5' end of a novel gene, an ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2 (ATP5J2) psuedogene and part of a novel gene, complete sequence Length = 134566 Score = 40.1 bits (20), Expect = 5.0 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 37 cccagacccctc-cgcctccgcctcccc 63 |||||||||||| ||||||||||||||| Sbjct: 6451 cccagacccctctcgcctccgcctcccc 6424
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 39908 cctccgcctccgcctccccc 39927
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence Length = 136822 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgccatggcggcggcggccg 146 |||||||||||||||||||| Sbjct: 51961 cgccatggcggcggcggccg 51942
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 catggcggcggcggccgact 149 |||||||||||||||||||| Sbjct: 3319413 catggcggcggcggccgact 3319394
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 78779 cctccgcctccgcctccccc 78760
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ccctccgcctccgcctcccc 63 |||||||||||||||||||| Sbjct: 92343 ccctccgcctccgcctcccc 92362
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 cggacgccatggcggcggcggccg 146 ||||| |||||||||||||||||| Sbjct: 43416 cggacaccatggcggcggcggccg 43439
>emb|AJ720875.1| Gallus gallus mRNA for hypothetical protein, clone 28j4 Length = 4160 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 cgccatggcggcggcggccg 146 |||||||||||||||||||| Sbjct: 32 cgccatggcggcggcggccg 13
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 21068 cctccgcctccgcctccccc 21049
>dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds Length = 3046 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cccctccgcctccgcctccc 62 |||||||||||||||||||| Sbjct: 43 cccctccgcctccgcctccc 24
>dbj|AB206391.1| Zea mays ZmHK1b1 mRNA for histidine kinase, complete cds Length = 3046 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cccctccgcctccgcctccc 62 |||||||||||||||||||| Sbjct: 43 cccctccgcctccgcctccc 24
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cccctccgcctccgcctcccccgg 66 ||||||||||||| |||||||||| Sbjct: 173920 cccctccgcctccccctcccccgg 173897
>gb|AE005704.1| Caulobacter crescentus CB15 section 30 of 359 of the complete genome Length = 9704 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gggccagatccgcccggatc 240 |||||||||||||||||||| Sbjct: 5519 gggccagatccgcccggatc 5538
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 138158 cctccgcctccgcctccccc 138139
>gb|AF399872.1| Homarus americanus alpha actin mRNA, complete cds Length = 1386 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 tcccctccaccgtcggccgtcctc 92 ||||||||| |||||||||||||| Sbjct: 130 tcccctccatcgtcggccgtcctc 153
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 gccatggcggcggcggccga 147 |||||||||||||||||||| Sbjct: 2004896 gccatggcggcggcggccga 2004877
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 21243047 cctccgcctccgcctccccc 21243028
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 5271436 cctccgcctccgcctccccc 5271455
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 25044415 cctccgcctccgcctccccc 25044434 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 21395964 ccatggcggcggcggccgac 21395983 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 16952632 cctccgcctccgcctccccc 16952613
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 29322726 cctccgcctccgcctccccc 29322707 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 17191607 cctccgcctccgcctccccc 17191588 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 10280001 cctccgcctccgcctccccc 10280020
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 28140688 cctccgcctccgcctccccc 28140669 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ccagatccgcccggatctgg 243 |||||||||||||||||||| Sbjct: 16215979 ccagatccgcccggatctgg 16215998 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 5180570 cctccgcctccgcctccccc 5180589
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 1655412 cctccgcctccgcctccccc 1655393
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 123675 acccctccgcctccgcctcc 123694
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 cacggacgccatggcggcggcggc 144 ||||||||||||||||| |||||| Sbjct: 132449 cacggacgccatggcggaggcggc 132472
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 cacggacgccatggcggcggcggc 144 ||||||||||||||||| |||||| Sbjct: 48768 cacggacgccatggcggaggcggc 48791
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 67433 cctccgcctccgcctccccc 67414
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 69517 acccctccgcctccgcctcc 69536
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 25220 cctccgcctccgcctccccc 25201
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 60870 cctccgcctccgcctccccc 60851
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 111415 cctccgcctccgcctccccc 111396
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 164217 cctccgcctccgcctccccc 164236
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 25338 cctccgcctccgcctccccc 25357
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 92515 cctccgcctccgcctccccc 92496
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 gcggctccgtcggcccgcgc 205 |||||||||||||||||||| Sbjct: 4452842 gcggctccgtcggcccgcgc 4452861
>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome Length = 208315 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgccatggcggcggcggccg 146 |||||||||||||||||||| Sbjct: 111459 cgccatggcggcggcggccg 111478
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 95394 acccctccgcctccgcctcc 95413
>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1029H08 Length = 137050 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 101920 cctccgcctccgcctccccc 101939
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 144733 cctccgcctccgcctccccc 144714
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0025J22 Length = 175355 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 100531 cctccgcctccgcctccccc 100550
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 95889 ccatggcggcggcggccgac 95908
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 99643 cctccgcctccgcctccccc 99624
>dbj|AK121737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084J09, full insert sequence Length = 3917 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 89 cctccgcctccgcctccccc 108
>dbj|AK121107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072J20, full insert sequence Length = 2760 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cggacgccatggcggcggcg 142 |||||||||||||||||||| Sbjct: 75 cggacgccatggcggcggcg 56
>dbj|AK121258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D01, full insert sequence Length = 2385 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 95 cctccgcctccgcctccccc 114
>dbj|AK121256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102F21, full insert sequence Length = 676 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 140 cctccgcctccgcctccccc 159
>dbj|AK110183.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-H08, full insert sequence Length = 3582 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 2531 acccctccgcctccgcctcc 2550
>dbj|AK106074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H10, full insert sequence Length = 1608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 40 cctccgcctccgcctccccc 59
>dbj|AK106012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B03, full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 174 cctccgcctccgcctccccc 193
>dbj|AK105611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B05, full insert sequence Length = 1800 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 229 acccctccgcctccgcctcc 248
>dbj|AK102539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096J21, full insert sequence Length = 1088 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 234 ccatggcggcggcggccgac 215
>dbj|AK101900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071B22, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 258 acccctccgcctccgcctcc 239
>dbj|AK102062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082D18, full insert sequence Length = 2296 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 121 cctccgcctccgcctccccc 140
>dbj|AK101559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050C24, full insert sequence Length = 1635 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 41 cctccgcctccgcctccccc 60
>dbj|AK069714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030K16, full insert sequence Length = 1121 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 414 cctccgcctccgcctccccc 395
>dbj|AK069416.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016D11, full insert sequence Length = 939 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 364 cctccgcctccgcctccccc 345
>dbj|AK068665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159O18, full insert sequence Length = 2348 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 93 cctccgcctccgcctccccc 112
>dbj|AK067379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102L05, full insert sequence Length = 4157 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 88 cctccgcctccgcctccccc 107
>dbj|AK060959.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H08, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ccatggcggcggcggccgac 148 |||||||||||||||||||| Sbjct: 175 ccatggcggcggcggccgac 156
>dbj|AK059028.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B12, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 72 acccctccgcctccgcctcc 91
>dbj|AK058559.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D08, full insert sequence Length = 1706 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 acccctccgcctccgcctcc 61 |||||||||||||||||||| Sbjct: 257 acccctccgcctccgcctcc 238
>gb|AF047490.1|AF047490 Zea mays zeta-carotene desaturase precursor, mRNA, complete cds Length = 2265 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 cggccacggacgccatggcg 136 |||||||||||||||||||| Sbjct: 221 cggccacggacgccatggcg 202
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 5337913 cctccgcctccgcctccccc 5337932
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 21169256 cctccgcctccgcctccccc 21169237
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 80992 cctccgcctccgcctccccc 81011
>emb|AL731631.2|OSJN00279 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0112E13, complete sequence Length = 133197 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 16175 cctccgcctccgcctccccc 16194
>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137571 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 47153 cctccgcctccgcctccccc 47172
>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete sequence Length = 206957 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 100728 cctccgcctccgcctccccc 100709
>emb|CT010509.10| Mouse DNA sequence from clone RP23-63E8 on chromosome 9, complete sequence Length = 258170 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 141819 cctccgcctccgcctccccc 141800
>emb|CT010496.14| Mouse DNA sequence from clone RP23-193I7 on chromosome 17, complete sequence Length = 209258 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 145329 cctccgcctccgcctccccc 145310
>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete sequence Length = 202441 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cctccgcctccgcctccccc 64 |||||||||||||||||||| Sbjct: 169895 cctccgcctccgcctccccc 169876 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,131,091 Number of Sequences: 3902068 Number of extensions: 3131091 Number of successful extensions: 86945 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82961 Number of HSP's gapped (non-prelim): 3980 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
