>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding|
           protein MBD1) (Protein containing methyl-CpG-binding
           domain 1)
          Length = 605

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 6   QQIMPTVFSKVKDSHINPSFHRRRRLPLPGRK-DLRPPLSPTATVKLAR 149
           ++++P+V+S+ +D   +P  +RRR+ P   R+  L P L PT   + A+
Sbjct: 383 KRLLPSVWSESEDGAGSPPPYRRRKRPSSARRHHLGPTLKPTLATRTAQ 431

>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 3 (EC
           3.6.1.-) (SMARCA3-like protein 3)
          Length = 1277

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/44 (34%), Positives = 28/44 (63%)
 Frame = +1

Query: 202 MGKSSKKNKVILAPPLPPDVDDEDILVSDEDVDFVEENREHVHL 333
           +GK+     +ILA P   + ++ED+LV+D + D  + NR+ +H+
Sbjct: 691 LGKTVMTIALILARPGRGNPENEDVLVADVNAD--KRNRKEIHM 732

>IF2_PARUW (Q6MD64) Translation initiation factor IF-2|
          Length = 920

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +1

Query: 118 FLLPRP*NLRGQRPLRGSSTHSRFVSYSMGKSSKKNKVILAPPLPPDVDDEDILVSDED 294
           F+ P+P   R  RPL  ++++ + VS +  +   KNK+    P     ++  +L +D+D
Sbjct: 210 FIKPKPQPERVSRPLEANNSNQKEVSEANKEKLDKNKI---KPKSKGFEEPKVLTADDD 265

>CTN3_HUMAN (Q9UI47) Alpha-3 catenin (Alpha T-catenin) (Cadherin-associated|
           protein)
          Length = 895

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 78  RLPLPGRKDLRPPLSPTATVKLARSASASGKLNPLQICVVFHG 206
           R+  P +K L     P  T    R  SA  K++PLQ+   F G
Sbjct: 849 RMKAPAKKPLIKREKPEETCAAVRRGSAKKKIHPLQVMSEFRG 891

>Y585_ARCFU (O29670) Hypothetical protein AF0585|
          Length = 90

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/42 (26%), Positives = 27/42 (64%)
 Frame = -1

Query: 339 GDQVDVLSILLDEIHILVGDQDVLVVDIRRQRRREDDLVLLA 214
           GD  D+L+++L  I++L+G   ++ +    +R +++ L+ L+
Sbjct: 2   GDYFDILTLILTAIYLLIGGGFIIYIYDTYKRTKQEFLIYLS 43

>SYI_HALSA (Q9HN97) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1070

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 235  LAPPLPPDVDDEDILVSDEDVDFVEENREHV 327
            LA  +  D+  +DI ++ E V+FVEE  EHV
Sbjct: 932  LAEQVAADLGRDDIELTTEMVEFVEETPEHV 962

>Y250_AQUAE (O66611) Hypothetical protein aq_250|
          Length = 145

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 131 DRETCEVSVRFGEAQPTPDLCRIPWGR 211
           ++ T  +  R GE  P P LC IPW R
Sbjct: 79  EKGTYGICERCGEEIPEPRLCAIPWTR 105

>CP19A_MOUSE (P28649) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 503

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = -1

Query: 327 DVLSILLDEIHILVGDQDVLVVDIR 253
           +V + +L EIH +VGD+D+ + DI+
Sbjct: 327 EVEAAILKEIHTVVGDRDIKIEDIQ 351

>MSCL_XYLFT (Q87FA1) Large-conductance mechanosensitive channel|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 223 NKVILAPPLPPDVDDEDILVSDEDVDFVEE 312
           NKVI   PLPP+   ED+L+  E  D +++
Sbjct: 105 NKVINKQPLPPETPSEDVLLLREIRDSLKK 134

>MSCL_XYLFA (Q9PHA5) Large-conductance mechanosensitive channel|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 223 NKVILAPPLPPDVDDEDILVSDEDVDFVEE 312
           NKVI   PLPP+   ED+L+  E  D +++
Sbjct: 105 NKVINKQPLPPETPSEDVLLLREIRDSLKK 134

>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)|
            (Proliferation-related protein p80) [Contains: MAP1 light
            chain LC2]
          Length = 2805

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 235  LAPPLPPDVDDEDILVSDEDVDFV 306
            L PPLPP +DD D+  S E+V  V
Sbjct: 2453 LNPPLPPSIDDRDL--STEEVRLV 2474

>NTP2_MCV1 (Q98218) Nucleoside triphosphatase II (EC 3.6.1.15) (NTPase II)|
           (Nucleoside triphosphate phosphohydrolase II) (NPH II)
          Length = 684

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -1

Query: 318 SILLDEIHILVGDQDVLVVDIRRQRRREDDLVLLAA 211
           +++LDE+H      D+++  +R  R R D +VL++A
Sbjct: 304 TVILDEVHEHDQMADIMLAVLRVHRARVDSIVLMSA 339

>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 163 RGSSTHSRFVSYSMGKSSKKNKVILAP 243
           +G+S  + F SY MG+    ++V+LAP
Sbjct: 5   QGNSNETLFSSYKMGRFDLSHRVVLAP 31

>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 596

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 235 LAPPLPPDVDDEDILVSDEDVDFVEENREHVHL 333
           + PPLPPD+   DI+      DF + + + + +
Sbjct: 487 IPPPLPPDIPSFDIIADSLSFDFKDTDMKRLSM 519

>RT13_OENBE (P15758) Mitochondrial ribosomal protein S13|
          Length = 114

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/64 (23%), Positives = 31/64 (48%)
 Frame = -1

Query: 309 LDEIHILVGDQDVLVVDIRRQRRREDDLVLLAALPHGIRHKSGVG*ASPKRTLTSQVSRS 130
           +D+I  + G   V+  +++R  R + +  +  +   GIRH+ G+     +    ++ SR 
Sbjct: 51  IDQIEQMRGQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRSHTNARTSRK 110

Query: 129 R*EK 118
           R  K
Sbjct: 111 RIRK 114

>CP19A_RAT (P22443) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 508

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 327 DVLSILLDEIHILVGDQDVLVVDIR 253
           +V + +L EIH +VGD+D+ + D++
Sbjct: 327 EVETAILKEIHTVVGDRDIRIGDVQ 351

>RT13_TOBAC (P05488) Mitochondrial ribosomal protein S13|
          Length = 116

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/43 (25%), Positives = 25/43 (58%)
 Frame = -1

Query: 309 LDEIHILVGDQDVLVVDIRRQRRREDDLVLLAALPHGIRHKSG 181
           +D+I  ++G   V+  +++R  R + + ++  +   GIRH+ G
Sbjct: 53  IDQIEQMIGQDHVVHWELKRGERADIERLISISCYRGIRHQDG 95

>CTN3_MOUSE (Q65CL1) Alpha-3 catenin (Alpha T-catenin) (Cadherin-associated|
           protein)
          Length = 895

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 78  RLPLPGRKDLRPPLSPTATVKLARSASASGKLNPLQICVVFHG 206
           R+  P +K L     P  T    R  SA  K++P+Q+   F G
Sbjct: 849 RMKAPAKKPLIKREKPEETWAAVRRGSAKKKIHPVQVMSEFRG 891

>PSRC_WOLSU (P31077) Polysulfide reductase chain C (Sulfur reductase chain C)|
          Length = 317

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 228 LVLLAALPHGIRHKSG 181
           +VL  ALPHGI+H SG
Sbjct: 273 VVLNVALPHGIKHSSG 288

>KN8R_YEAST (P53739) Probable serine/threonine-protein kinase YNR047W (EC|
           2.7.11.1)
          Length = 893

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 151 QRPLRG-SSTHSRFVSYSMGKSSKKNKVILAPPLPPDVDDEDILVSDE--DVDFVEENRE 321
           Q  L G S++ S  + Y    +S  N    +PPL P + + D+L + +   +D  E  RE
Sbjct: 110 QSSLEGDSASSSSKLRYVKPMTSVANASPASPPLSPTIPETDVLQTPKMVHIDQHEHERE 169

Query: 322 H 324
           H
Sbjct: 170 H 170

>HSP11_WHEAT (P12810) 16.9 kDa class I heat shock protein (Low molecular weight|
           heat shock protein) (Heat shock protein 17) (HSP 16.9)
          Length = 151

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -1

Query: 333 QVDVLSILLDEIHILVGDQDVLVVDIRRQRRRED 232
           +VD+  +  +E+ + V D +VLVV   R R +ED
Sbjct: 58  KVDLPGVKKEEVKVEVEDGNVLVVSGERSREKED 91

>COAT_IRV1 (P18162) Major capsid protein (MCP) (Major structural protein)|
           (MSP)
          Length = 464

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +3

Query: 15  MPTVFSKVKDSHINPSFHRRRRLPLPGRKDLRPPLSPTATVKLARSASASGKLNPLQI 188
           +PT      +  IN +F     L +     L PP SP   + +    SA+  L P+Q+
Sbjct: 191 LPTAALPYNEMQINFNFRDWHELLILTNSALVPPASPYVPIVVGTHISAAPVLGPVQV 248

>5NT1B_HUMAN (Q96P26) Cytosolic 5'-nucleotidase 1B (EC 3.1.3.5) (Cytosolic|
           5'-nucleotidase IB) (cN1B) (cN-IB) (Autoimmune
           infertility-related protein)
          Length = 610

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 15  MPTVFSKVKDSHINPSFHRRRRLPLPGRKDLRPPLSP 125
           +P+  +  +    +PS H     PL G+  L+PP SP
Sbjct: 147 LPSSSTSSRTPSTSPSLHDSSPPPLSGQPSLQPPASP 183


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,696,479
Number of Sequences: 219361
Number of extensions: 699403
Number of successful extensions: 2831
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)