ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 137 3e-29
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
3dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
4dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
5dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
6dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 3e-29
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 115 9e-23
8dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 9e-23
9gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 115 9e-23
10ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) tr... 64 3e-07
11ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91)... 64 3e-07
12gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, co... 64 3e-07
13gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 64 3e-07
14gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, co... 64 3e-07
15gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 64 3e-07
16emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein 48 0.018
17emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.29
18ref|XM_545469.2| PREDICTED: Canis familiaris similar to Triparti... 42 1.1
19emb|AL049859.7|HSJ826A18 Human DNA sequence from clone RP5-826A1... 42 1.1
20gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 ma... 40 4.5
21gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome... 40 4.5
22gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 40 4.5
23emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in ... 40 4.5
24gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer ... 40 4.5
25dbj|AK125374.1| Homo sapiens cDNA FLJ43384 fis, clone OCBBF20061... 40 4.5
26gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, compl... 40 4.5
27gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, comple... 40 4.5
28dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.5
29emb|AJ249358.1|GAS249358 Grapevine asteroid mosaic-associated vi... 40 4.5
30emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-7... 40 4.5
31gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosom... 40 4.5
32dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic ... 40 4.5 
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 213 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 272

                                                                       
Query: 243 agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 273 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 332

                                       
Query: 303 gctttggcgancagcagcgtttcatcgg 330
           |||| |||||  ||||||| ||||||||
Sbjct: 333 gcttcggcgacaagcagcggttcatcgg 360
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                           
Query: 183     agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
               ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 4253482 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 4253541

                                                                           
Query: 243     agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
               |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 4253542 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 4253601

                                           
Query: 303     gctttggcgancagcagcgtttcatcgg 330
               |||| |||||  ||||||| ||||||||
Sbjct: 4253602 gcttcggcgacaagcagcggttcatcgg 4253629
to top
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                         
Query: 183   agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
             ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 91449 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 91508

                                                                         
Query: 243   agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
             |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 91509 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 91568

                                         
Query: 303   gctttggcgancagcagcgtttcatcgg 330
             |||| |||||  ||||||| ||||||||
Sbjct: 91569 gcttcggcgacaagcagcggttcatcgg 91596
to top
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                         
Query: 183   agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
             ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 33252 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 33311

                                                                         
Query: 243   agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
             |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 33312 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 33371

                                         
Query: 303   gctttggcgancagcagcgtttcatcgg 330
             |||| |||||  ||||||| ||||||||
Sbjct: 33372 gcttcggcgacaagcagcggttcatcgg 33399
to top
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
           insert sequence
          Length = 3139

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 213 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 272

                                                                       
Query: 243 agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 273 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 332

                                       
Query: 303 gctttggcgancagcagcgtttcatcgg 330
           |||| |||||  ||||||| ||||||||
Sbjct: 333 gcttcggcgacaagcagcggttcatcgg 360
to top
>dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G02, full
           insert sequence
          Length = 1164

 Score =  137 bits (69), Expect = 3e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 159 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 218

                                                                       
Query: 243 agcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||| || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 219 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 278

                                       
Query: 303 gctttggcgancagcagcgtttcatcgg 330
           |||| |||||  ||||||| ||||||||
Sbjct: 279 gcttcggcgacaagcagcggttcatcgg 306
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  115 bits (58), Expect = 9e-23
 Identities = 129/153 (84%)
 Strand = Plus / Plus

                                                                           
Query: 184     gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
               |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 4820085 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 4820144

                                                                           
Query: 244     gcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
               ||| || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 4820145 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 4820204

                                                
Query: 304     ctttggcgancagcagcgtttcatcggcaccgc 336
               ||| |||||  ||||||| ||||||||||||||
Sbjct: 4820205 cttcggcgacaagcagcgcttcatcggcaccgc 4820237
to top
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
           insert sequence
          Length = 3137

 Score =  115 bits (58), Expect = 9e-23
 Identities = 129/153 (84%)
 Strand = Plus / Plus

                                                                       
Query: 184 gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
           |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 183 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 242

                                                                       
Query: 244 gcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
           ||| || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 243 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 302

                                            
Query: 304 ctttggcgancagcagcgtttcatcggcaccgc 336
           ||| |||||  ||||||| ||||||||||||||
Sbjct: 303 cttcggcgacaagcagcgcttcatcggcaccgc 335
to top
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score =  115 bits (58), Expect = 9e-23
 Identities = 129/153 (84%)
 Strand = Plus / Plus

                                                                         
Query: 184   gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
             |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 92493 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 92552

                                                                         
Query: 244   gcgtggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
             ||| || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 92553 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 92612

                                              
Query: 304   ctttggcgancagcagcgtttcatcggcaccgc 336
             ||| |||||  ||||||| ||||||||||||||
Sbjct: 92613 cttcggcgacaagcagcgcttcatcggcaccgc 92645
to top
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.1 mRNA, complete cds
          Length = 2949

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                                  
Query: 311 gancagcagcgtttcatcggcac 333
           ||  ||||||| |||||||||||
Sbjct: 277 gacaagcagcgcttcatcggcac 299
to top
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.2 mRNA, complete cds
          Length = 3012

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 261 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 320

                                  
Query: 311 gancagcagcgtttcatcggcac 333
           ||  ||||||| |||||||||||
Sbjct: 321 gacaagcagcgcttcatcggcac 343
to top
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds
          Length = 2798

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                                  
Query: 311 gancagcagcgtttcatcggcac 333
           ||  ||||||| |||||||||||
Sbjct: 277 gacaagcagcgcttcatcggcac 299
to top
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                         
Query: 251   atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
             |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 37179 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 37238

                                    
Query: 311   gancagcagcgtttcatcggcac 333
             ||  ||||||| |||||||||||
Sbjct: 37239 gacaagcagcgcttcatcggcac 37261
to top
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds
          Length = 2496

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 67  atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 126

                                  
Query: 311 gancagcagcgtttcatcggcac 333
           ||  ||||||| |||||||||||
Sbjct: 127 gacaagcagcgcttcatcggcac 149
to top
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence,
            complete sequence
          Length = 116905

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 251  atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
            |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 3765 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 3706

                                   
Query: 311  gancagcagcgtttcatcggcac 333
            ||  ||||||| |||||||||||
Sbjct: 3705 gacaagcagcgcttcatcggcac 3683
to top
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein
          Length = 2923

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctt 306
           |||||||| || || ||||| |||||||| || ||||| || ||||||||||||||
Sbjct: 220 atcgacgtcgtgcttaatgatgagtccaatcgtgagacgcctgctattgtctgctt 275
to top
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 89     ctctggcaccggcaacggcctcctca 114
              ||||||| ||||||||||||||||||
Sbjct: 256544 ctctggctccggcaacggcctcctca 256569
to top
>ref|XM_545469.2| PREDICTED: Canis familiaris similar to Tripartite motif protein 26
            (Zinc finger protein 173) (Acid finger protein) (AFP)
            (RING finger protein 95) (LOC488347), mRNA
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 214  tgagagctgcattgtgggggtggcc 238
            |||||||||||| ||||||||||||
Sbjct: 1212 tgagagctgcatggtgggggtggcc 1236
to top
>emb|AL049859.7|HSJ826A18 Human DNA sequence from clone RP5-826A18 on chromosome Xq23, complete
             sequence
          Length = 77913

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   tggggtttgatctgggcaatg 215
             |||||||||||||||||||||
Sbjct: 52761 tggggtttgatctgggcaatg 52781
to top
>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence
          Length = 191415

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    gcctcatcagctgcggcggctacc 66
             ||||||||||||||||| ||||||
Sbjct: 49794 gcctcatcagctgcggctgctacc 49817
to top
>gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome 1, complete
           sequence
          Length = 135256

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 43  gcctcatcagctgcggcggctacc 66
           ||||||||||||||||| ||||||
Sbjct: 676 gcctcatcagctgcggctgctacc 653
to top
>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
              Sequence, complete sequence
          Length = 195048

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     agaagcaaagctccagaagc 86
              ||||||||||||||||||||
Sbjct: 187805 agaagcaaagctccagaagc 187824
to top
>emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in linkage group 13,
             complete sequence
          Length = 99030

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ttgatctgggcaatgagagc 220
             ||||||||||||||||||||
Sbjct: 68027 ttgatctgggcaatgagagc 68008
to top
>gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 147520

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gacaccagcctcatcagctg 55
            ||||||||||||||||||||
Sbjct: 6708 gacaccagcctcatcagctg 6689
to top
>dbj|AK125374.1| Homo sapiens cDNA FLJ43384 fis, clone OCBBF2006148, moderately
           similar to P53-BINDING PROTEIN 2
          Length = 3137

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  gaagcttctctggcaccggc 101
           ||||||||||||||||||||
Sbjct: 88  gaagcttctctggcaccggc 69
to top
>gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, complete sequence
          Length = 186462

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   gctgctgccaagacaccagc 44
            ||||||||||||||||||||
Sbjct: 9060 gctgctgccaagacaccagc 9041
to top
>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence
          Length = 156789

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     gctgctgccaagacaccagc 44
              ||||||||||||||||||||
Sbjct: 148737 gctgctgccaagacaccagc 148718
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 103     acggcctcctcaccgcgggtgtag 126
               |||||||||||||||| |||||||
Sbjct: 3985224 acggcctcctcaccgccggtgtag 3985247
to top
>emb|AJ249358.1|GAS249358 Grapevine asteroid mosaic-associated virus partial mRNA for
           methyltransferase domain
          Length = 575

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 aggagtccaagcgggagaca 289
           ||||||||||||||||||||
Sbjct: 298 aggagtccaagcgggagaca 279
to top
>emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-73M18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165617

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     gaagcttctctggcaccggc 101
              ||||||||||||||||||||
Sbjct: 109196 gaagcttctctggcaccggc 109177
to top
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence
          Length = 194611

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    agaagcaaagctccagaagc 86
             ||||||||||||||||||||
Sbjct: 49613 agaagcaaagctccagaagc 49632
to top
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster
          Length = 21391

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   acggcctcctcaccgcgggtgtag 126
             |||||||||||||||| |||||||
Sbjct: 10968 acggcctcctcaccgccggtgtag 10945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,449,146
Number of Sequences: 3902068
Number of extensions: 2449146
Number of successful extensions: 41906
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41830
Number of HSP's gapped (non-prelim): 76
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top