ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
3emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 103 5e-19
4gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
7gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.025
8gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare str... 48 0.025
9dbj|AK073176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
10dbj|AK065775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
11gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.40
12emb|CR450783.2| Mouse DNA sequence from clone WI1-1091D11 on chr... 44 0.40
13emb|BX530084.11| Mouse DNA sequence from clone RP24-548D9 on chr... 44 0.40
14emb|AL731565.17| Mouse DNA sequence from clone RP23-83D8 on chro... 44 0.40
15emb|AL713967.18| Mouse DNA sequence from clone RP23-132K17 on ch... 44 0.40
16gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 42 1.6
17gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, com... 42 1.6
18gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, c... 42 1.6
19gb|AC154579.3| Mus musculus BAC clone RP23-376B1 from chromosome... 42 1.6
20ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
21ref|NM_197799.1| Oryza sativa (japonica cultivar-group) putative... 40 6.2
22gb|AC125160.3| Mus musculus BAC clone RP24-409P4 from chromosome... 40 6.2
23emb|AL589948.13| Human DNA sequence from clone RP11-402N18 on ch... 40 6.2
24gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.2
25emb|BX547932.17| Zebrafish DNA sequence from clone DKEY-269E10 i... 40 6.2
26emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.2
27emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 6.2
28emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
29gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionop... 40 6.2
30gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen... 40 6.2
31dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Can... 40 6.2
34gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana... 40 6.2
35dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
38emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.2
39dbj|AK063299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
40tpe|BN000658.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.2
41tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.2
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
43gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, comple... 40 6.2
44emb|Z68225.1|HSL112A12 Human DNA sequence from clone LA04NC01-11... 40 6.2
45gb|AC116612.5| Homo sapiens BAC clone RP13-582L3 from 4, complet... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 5e-19
 Identities = 122/143 (85%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
                ||||||||||||  || |||||| |||||| ||||||||| ||||||  ||||||||  |
Sbjct: 23226327 tccaacagatggcaagtgccttgacaggggcgatgacctcagtcatcatcaagctcagtg 23226386

                                                                            
Query: 375      ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
                | || || ||||||||||||||| ||||||||||  | || |||||||||| |||| |||
Sbjct: 23226387 cacttcttggggaggagtacgcaaagctgaaaggattacagagggaggtgg-agtttatg 23226445

                                       
Query: 435      -aagatgagctgagcagcatgaa 456
                 ||||||||||||||||||||||
Sbjct: 23226446 aaagatgagctgagcagcatgaa 23226468



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 116/143 (81%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
                ||||||||||||  || |||||| | || |||||||| || ||||||  ||||||||| |
Sbjct: 23218336 tccaacagatggcaagtgccttgacgggagtgatgacatccgtcatcaacaagctcactg 23218395

                                                                            
Query: 375      ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
                | || || ||| ||||||||    || ||||||| || ||  ||||||||| |||| |||
Sbjct: 23218396 ctcttcttgggaaggagtacatgaagttgaaaggagtacagggggaggtgg-agtttatg 23218454

                                       
Query: 435      a-agatgagctgagcagcatgaa 456
                | |||||||||||||||||||||
Sbjct: 23218455 atagatgagctgagcagcatgaa 23218477
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 5e-19
 Identities = 122/143 (85%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
                ||||||||||||  || |||||| |||||| ||||||||| ||||||  ||||||||  |
Sbjct: 23154518 tccaacagatggcaagtgccttgacaggggcgatgacctcagtcatcatcaagctcagtg 23154577

                                                                            
Query: 375      ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
                | || || ||||||||||||||| ||||||||||  | || |||||||||| |||| |||
Sbjct: 23154578 cacttcttggggaggagtacgcaaagctgaaaggattacagagggaggtgg-agtttatg 23154636

                                       
Query: 435      -aagatgagctgagcagcatgaa 456
                 ||||||||||||||||||||||
Sbjct: 23154637 aaagatgagctgagcagcatgaa 23154659



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 116/143 (81%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
                ||||||||||||  || |||||| | || |||||||| || ||||||  ||||||||| |
Sbjct: 23146527 tccaacagatggcaagtgccttgacgggagtgatgacatccgtcatcaacaagctcactg 23146586

                                                                            
Query: 375      ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
                | || || ||| ||||||||    || ||||||| || ||  ||||||||| |||| |||
Sbjct: 23146587 ctcttcttgggaaggagtacatgaagttgaaaggagtacagggggaggtgg-agtttatg 23146645

                                       
Query: 435      a-agatgagctgagcagcatgaa 456
                | |||||||||||||||||||||
Sbjct: 23146646 atagatgagctgagcagcatgaa 23146668
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 168063

 Score =  103 bits (52), Expect = 5e-19
 Identities = 122/143 (85%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                         
Query: 315   tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
             ||||||||||||  || |||||| |||||| ||||||||| ||||||  ||||||||  |
Sbjct: 39445 tccaacagatggcaagtgccttgacaggggcgatgacctcagtcatcatcaagctcagtg 39504

                                                                         
Query: 375   ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
             | || || ||||||||||||||| ||||||||||  | || |||||||||| |||| |||
Sbjct: 39505 cacttcttggggaggagtacgcaaagctgaaaggattacagagggaggtgg-agtttatg 39563

                                    
Query: 435   -aagatgagctgagcagcatgaa 456
              ||||||||||||||||||||||
Sbjct: 39564 aaagatgagctgagcagcatgaa 39586



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 116/143 (81%), Gaps = 2/143 (1%)
 Strand = Plus / Plus

                                                                         
Query: 315   tccaacagatggtgagcgccttggcaggggtgatgacctctgtcatcggcaagctcaccg 374
             ||||||||||||  || |||||| | || |||||||| || ||||||  ||||||||| |
Sbjct: 31454 tccaacagatggcaagtgccttgacgggagtgatgacatccgtcatcaacaagctcactg 31513

                                                                         
Query: 375   ccctgctcggggaggagtacgcanagctgaaaggtgtgcacagggaggtggnagttcatg 434
             | || || ||| ||||||||    || ||||||| || ||  ||||||||| |||| |||
Sbjct: 31514 ctcttcttgggaaggagtacatgaagttgaaaggagtacagggggaggtgg-agtttatg 31572

                                    
Query: 435   a-agatgagctgagcagcatgaa 456
             | |||||||||||||||||||||
Sbjct: 31573 atagatgagctgagcagcatgaa 31595
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>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07,
              complete sequence
          Length = 149697

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 435    aagatgagctgagcagcatgaacgc 459
              |||||||||||||||||||||||||
Sbjct: 145020 aagatgagctgagcagcatgaacgc 145044
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 435      aagatgagctgagcagcatgaacgc 459
                |||||||||||||||||||||||||
Sbjct: 23808982 aagatgagctgagcagcatgaacgc 23809006



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 323     atggtgagcgccttggcaggggtgatga 350
               ||||||||||||||||||||| ||||||
Sbjct: 7283104 atggtgagcgccttggcagggatgatga 7283131
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 435      aagatgagctgagcagcatgaacgc 459
                |||||||||||||||||||||||||
Sbjct: 24120651 aagatgagctgagcagcatgaacgc 24120675



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 323     atggtgagcgccttggcaggggtgatga 350
               ||||||||||||||||||||| ||||||
Sbjct: 7353190 atggtgagcgccttggcagggatgatga 7353217
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>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0023E20, complete sequence
          Length = 130827

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 323   atggtgagcgccttggcaggggtgatga 350
             ||||||||||||||||||||| ||||||
Sbjct: 80065 atggtgagcgccttggcagggatgatga 80038
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>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042K08, from chromosome 2, complete sequence
          Length = 164628

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 323    atggtgagcgccttggcaggggtgatga 350
              ||||||||||||||||||||| ||||||
Sbjct: 156198 atggtgagcgccttggcagggatgatga 156171
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>dbj|AK073176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033004J13, full
           insert sequence
          Length = 2576

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 93/114 (81%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                       
Query: 344 gtgatgacctctgtcatcggcaagctcaccgccctgctcggggaggagtacgcanagctg 403
           |||||||| || ||||||  ||||||||| || || || ||| ||||||||    || ||
Sbjct: 336 gtgatgacatccgtcatcaacaagctcactgctcttcttgggaaggagtacatgaagttg 395

                                                                 
Query: 404 aaaggtgtgcacagggaggtggnagttcatga-agatgagctgagcagcatgaa 456
           ||||| || ||  ||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 396 aaaggagtacagggggaggtgg-agtttatgatagatgagctgagcagcatgaa 448
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>dbj|AK065775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038N04, full
           insert sequence
          Length = 3353

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 93/114 (81%), Gaps = 2/114 (1%)
 Strand = Plus / Plus

                                                                       
Query: 344 gtgatgacctctgtcatcggcaagctcaccgccctgctcggggaggagtacgcanagctg 403
           |||||||| || ||||||  ||||||||| || || || ||| ||||||||    || ||
Sbjct: 420 gtgatgacatccgtcatcaacaagctcactgctcttcttgggaaggagtacatgaagttg 479

                                                                 
Query: 404 aaaggtgtgcacagggaggtggnagttcatga-agatgagctgagcagcatgaa 456
           ||||| || ||  ||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 480 aaaggagtacagggggaggtgg-agtttatgatagatgagctgagcagcatgaa 532
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 361    cggcaagctcaccgccctgctcgggg 386
              ||||||| ||||||||||||||||||
Sbjct: 994867 cggcaaggtcaccgccctgctcgggg 994842
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>emb|CR450783.2| Mouse DNA sequence from clone WI1-1091D11 on chromosome 4, complete
             sequence
          Length = 27899

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 271   ttttctgcaaaactgggcattt 292
             ||||||||||||||||||||||
Sbjct: 24169 ttttctgcaaaactgggcattt 24148
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>emb|BX530084.11| Mouse DNA sequence from clone RP24-548D9 on chromosome 4, complete
             sequence
          Length = 77402

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 271   ttttctgcaaaactgggcattt 292
             ||||||||||||||||||||||
Sbjct: 49599 ttttctgcaaaactgggcattt 49620
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>emb|AL731565.17| Mouse DNA sequence from clone RP23-83D8 on chromosome 4, complete
              sequence
          Length = 185273

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 271    ttttctgcaaaactgggcattt 292
              ||||||||||||||||||||||
Sbjct: 161093 ttttctgcaaaactgggcattt 161114
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>emb|AL713967.18| Mouse DNA sequence from clone RP23-132K17 on chromosome 4, complete
              sequence
          Length = 195305

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 271    ttttctgcaaaactgggcattt 292
              ||||||||||||||||||||||
Sbjct: 141355 ttttctgcaaaactgggcattt 141334
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 437    gatgagctgagcagcatgaac 457
              |||||||||||||||||||||
Sbjct: 151831 gatgagctgagcagcatgaac 151851
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>gb|AC008133.7| Homo sapiens chromosome 17, clone RP11-40A13, complete sequence
          Length = 179744

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 405   aaggtgtgcacagggaggtgg 425
             |||||||||||||||||||||
Sbjct: 85138 aaggtgtgcacagggaggtgg 85158
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>gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, complete sequence
          Length = 185563

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   tggcaggggtgatgacctctg 356
             |||||||||||||||||||||
Sbjct: 96837 tggcaggggtgatgacctctg 96857
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>gb|AC154579.3| Mus musculus BAC clone RP23-376B1 from chromosome 17, complete sequence
          Length = 193686

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 242   ttgctttgtcgtgctgaagct 262
             |||||||||||||||||||||
Sbjct: 14751 ttgctttgtcgtgctgaagct 14771
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>ref|XM_467718.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 1387 tgatctcgccggcggcgccg 1368
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>ref|NM_197799.1| Oryza sativa (japonica cultivar-group) putative peroxidase
           (OSJNBa0057L21.19), mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 tgatctcgccggcggcgccg 214
           ||||||||||||||||||||
Sbjct: 997 tgatctcgccggcggcgccg 978
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>gb|AC125160.3| Mus musculus BAC clone RP24-409P4 from chromosome 7, complete sequence
          Length = 178643

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    tggggtcattttctgcaaaa 282
              ||||||||||||||||||||
Sbjct: 163078 tggggtcattttctgcaaaa 163097
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>emb|AL589948.13| Human DNA sequence from clone RP11-402N18 on chromosome 10 Contains a
             repressor of estrogen receptor activity (BAP) (REA)
             pseudogene and a basic transcription factor 3, like 1
             (OPG, OCIF, HUMBTFB, TNFRSF11B) (BTF3L1) pseudogene,
             complete sequence
          Length = 99268

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ttttctgcaaaactgggcat 290
             ||||||||||||||||||||
Sbjct: 32598 ttttctgcaaaactgggcat 32617
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     tcggcaagctcaccgccctg 379
               ||||||||||||||||||||
Sbjct: 1200408 tcggcaagctcaccgccctg 1200427
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>emb|BX547932.17| Zebrafish DNA sequence from clone DKEY-269E10 in linkage group 7,
             complete sequence
          Length = 82464

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   gcatccaacagatggtgagc 331
             ||||||||||||||||||||
Sbjct: 36913 gcatccaacagatggtgagc 36932
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    cggcggcgccgctggcctgg 223
              ||||||||||||||||||||
Sbjct: 203892 cggcggcgccgctggcctgg 203911
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    cggcggcgccgctggcctgg 223
              ||||||||||||||||||||
Sbjct: 327936 cggcggcgccgctggcctgg 327955
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    cggcggcgccgctggcctgg 223
              ||||||||||||||||||||
Sbjct: 275963 cggcggcgccgctggcctgg 275944
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>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin
             biosynthetic gene cluster, complete sequence
          Length = 132544

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   accgccctgctcggggagga 390
             ||||||||||||||||||||
Sbjct: 86754 accgccctgctcggggagga 86773
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>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete
             sequence
          Length = 183046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tgatctcgccggcggcgccg 214
             ||||||||||||||||||||
Sbjct: 69782 tgatctcgccggcggcgccg 69763
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 195      tgatctcgccggcggcgccg 214
                ||||||||||||||||||||
Sbjct: 21938539 tgatctcgccggcggcgccg 21938558
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 195      tgatctcgccggcggcgccg 214
                ||||||||||||||||||||
Sbjct: 31019788 tgatctcgccggcggcgccg 31019769
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>gb|AC117500.13| Homo sapiens 12 BAC RP11-495K9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180995

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   caaaactgggcattttggtagcta 301
             |||||||||||||||| |||||||
Sbjct: 16830 caaaactgggcattttagtagcta 16807
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>gb|AC012463.4|AC012463 Genomic sequence for Arabidopsis thaliana BAC T2E6 from chromosome I,
             complete sequence
          Length = 95816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tttgctttgtcgtgctgaag 260
             ||||||||||||||||||||
Sbjct: 64398 tttgctttgtcgtgctgaag 64417
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>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tgatctcgccggcggcgccg 214
             ||||||||||||||||||||
Sbjct: 74744 tgatctcgccggcggcgccg 74725
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>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0585G03
          Length = 173649

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 9012 tgatctcgccggcggcgccg 8993
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>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full
            insert sequence
          Length = 1726

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 1386 tgatctcgccggcggcgccg 1367
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    cggcggcgccgctggcctgg 223
              ||||||||||||||||||||
Sbjct: 561605 cggcggcgccgctggcctgg 561586
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>dbj|AK063299.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F01, full
            insert sequence
          Length = 1763

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 1359 tgatctcgccggcggcgccg 1340
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>tpe|BN000658.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx129 gene for
            class III peroxidase 129 precursor, exons 1-4
          Length = 2307

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 2281 tgatctcgccggcggcgccg 2262
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>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for
            class III peroxidase 31 precursor, exon 1
          Length = 1353

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tgatctcgccggcggcgccg 214
            ||||||||||||||||||||
Sbjct: 1309 tgatctcgccggcggcgccg 1290
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 195      tgatctcgccggcggcgccg 214
                ||||||||||||||||||||
Sbjct: 21950202 tgatctcgccggcggcgccg 21950221
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>gb|AC124442.3| Mus musculus BAC clone RP24-178G20 from 7, complete sequence
          Length = 177517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    tggggtcattttctgcaaaa 282
              ||||||||||||||||||||
Sbjct: 163148 tggggtcattttctgcaaaa 163129
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>emb|Z68225.1|HSL112A12 Human DNA sequence from clone LA04NC01-112A12 on chromosome 4, complete
             sequence
          Length = 25889

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gccctctgcccacgcttcca 71
             ||||||||||||||||||||
Sbjct: 12452 gccctctgcccacgcttcca 12433
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>gb|AC116612.5| Homo sapiens BAC clone RP13-582L3 from 4, complete sequence
          Length = 96249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    gccctctgcccacgcttcca 71
             ||||||||||||||||||||
Sbjct: 78695 gccctctgcccacgcttcca 78714


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,954,141
Number of Sequences: 3902068
Number of extensions: 2954141
Number of successful extensions: 61436
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60796
Number of HSP's gapped (non-prelim): 634
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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