ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y104_ENCCU (Q8STF2) Hypothetical protein ECU01_0040/ECU01_1570/E... 29 6.3

>Y104_ENCCU (Q8STF2) Hypothetical protein|
           ECU01_0040/ECU01_1570/ECU04_0050/ECU05_0020/
           ECU08_2130/ECU10_1880
          Length = 204

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 61  SMRDAAATSRHQTQPGRRASPCSDRPPP 144
           S R + AT   QT+P  R +PC  RP P
Sbjct: 128 SRRLSKATQNVQTRPSERPAPCHRRPGP 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,984,128
Number of Sequences: 219361
Number of extensions: 320627
Number of successful extensions: 838
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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