ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FGRL1_RAT (Q7TQM3) Fibroblast growth factor receptor-like 1 prec... 32 0.49
2FGRL1_MOUSE (Q91V87) Fibroblast growth factor receptor-like 1 pr... 32 0.49
3FGRL1_HUMAN (Q8N441) Fibroblast growth factor receptor-like 1 pr... 31 0.64
4PE2R1_HUMAN (P34995) Prostaglandin E2 receptor, EP1 subtype (Pro... 30 1.4
5PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX 30 1.9
6OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 28 5.4
7FGRL1_CHICK (Q7T2H2) Fibroblast growth factor receptor-like 1 pr... 28 5.4
8LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL) 28 5.4
9H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC ... 28 5.4
10VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21 28 5.4
11OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 28 7.1
12YIHF_ECOLI (P32128) Hypothetical protein yihF 28 7.1
13RIBD_MYCTU (P71677) Riboflavin biosynthesis protein ribD [Includ... 28 7.1
14ATR_CAEEL (Q22258) Serine/threonine-protein kinase ATR (EC 2.7.1... 28 7.1
15Y064_MYCGE (P47310) Hypothetical protein MG064 27 9.2
16PER1_LYCES (P15003) Suberization-associated anionic peroxidase 1... 27 9.2
17CLCN1_HUMAN (P35523) Chloride channel protein, skeletal muscle (... 27 9.2

>FGRL1_RAT (Q7TQM3) Fibroblast growth factor receptor-like 1 precursor (FGF|
           receptor-like protein 1)
          Length = 529

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = -2

Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211
           R  ST+  GG+  +      + SR + S +  L ++ +R  D   Y+ +      YS   
Sbjct: 287 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLISRARQDDAGMYICLGANTMGYSFRS 346

Query: 210 AMIDSMDAPRPPG 172
           A +  +  P+PPG
Sbjct: 347 AFLTVLPDPKPPG 359



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>FGRL1_MOUSE (Q91V87) Fibroblast growth factor receptor-like 1 precursor (FGF|
           receptor-like protein 1) (Fibroblast growth factor
           receptor 5)
          Length = 529

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = -2

Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211
           R  ST+  GG+  +      + SR + S +  L ++ +R  D   Y+ +      YS   
Sbjct: 287 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLISRARQDDAGMYICLGANTMGYSFRS 346

Query: 210 AMIDSMDAPRPPG 172
           A +  +  P+PPG
Sbjct: 347 AFLTVLPDPKPPG 359



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>FGRL1_HUMAN (Q8N441) Fibroblast growth factor receptor-like 1 precursor (FGF|
           receptor-like protein 1) (Fibroblast growth factor
           receptor 5) (FGFR-like protein) (FGF homologous factor
           receptor)
          Length = 504

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = -2

Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211
           R  ST+  GG+  +      + SR + S +  L +  +R  D   Y+ +      YS   
Sbjct: 291 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLITRARQDDAGMYICLGANTMGYSFRS 350

Query: 210 AMIDSMDAPRPPG 172
           A +  +  P+PPG
Sbjct: 351 AFLTVLPDPKPPG 363



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>PE2R1_HUMAN (P34995) Prostaglandin E2 receptor, EP1 subtype (Prostanoid EP1|
           receptor) (PGE receptor, EP1 subtype)
          Length = 402

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 304 RYQWRRAARQPGPASGAHRRTRAG 375
           R +WRR +R+P PASG   R R G
Sbjct: 231 RARWRRRSRRPPPASGPDSRRRWG 254



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>PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX|
          Length = 360

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/59 (37%), Positives = 28/59 (47%)
 Frame = +1

Query: 199 VDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQWRRAARQPGPASGAHRRTRAG 375
           +D  AGAG++          RP Q +RP R       Q RRAA +P P S A R   +G
Sbjct: 303 LDRGAGAGLY----------RPRQRRRPRR-------QKRRAACRPRPRSAAGRAPGSG 344



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>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = -2

Query: 366 RSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSVYSSARAMIDSMDA 187
           ++ VSA G  R+    SP I  L++    PLSL  + V+ L++ + ++S ++     +  
Sbjct: 223 QAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQ 281

Query: 186 PR 181
           PR
Sbjct: 282 PR 283



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>FGRL1_CHICK (Q7T2H2) Fibroblast growth factor receptor-like 1 precursor|
          Length = 487

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
 Frame = -2

Query: 375 TRARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSA 214
           ++  ST+  GG+  +      + SR + S +  L +  ++ +D   Y+ +      YS  
Sbjct: 284 SKYNSTIDVGGQKFVVLPTGEVWSRPDGSYLNKLMITRAKEEDAGMYICLGANTMGYSFR 343

Query: 213 RAMIDSMDAPRPP 175
            A +  +  P+PP
Sbjct: 344 SAFLTVLPDPKPP 356



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>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)|
          Length = 1068

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
 Frame = -2

Query: 318 SPLISRLESSAVRPLSLNWSRV------KDLSQYLSVYSSARAMIDSMDAPRPPGGELFG 157
           S +++RL+  A++  S  W          D+ +YL+  S +       + P P GG +  
Sbjct: 203 SGILARLQKLAIQQPSQEWKTFLDCVTESDMEKYLNSSSKS-------NPPEPSGGTVIP 255

Query: 156 AVLXXXXXXXXXXXXRIGGEIPAGWRG 76
             L              GG++P G +G
Sbjct: 256 GTLPSKQKPDCGKMSGYGGKLPHGKKG 282



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>H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3) (mHS6ST-3)
          Length = 470

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 256 ARPVQAQRPHRRALQPRYQWRRAARQPGPASGAHRRTR 369
           ARP     P RRA  P  +W R  + P P  G    +R
Sbjct: 46  ARPPAVPSPARRAQAPLDEWERRPQLPPPPRGPPEGSR 83



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>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +1

Query: 157  PKKLPPRGAGGVHGVDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQ 312
            P +L    A        +A A   A+VLAQ        A +PH+   QP  Q
Sbjct: 1590 PAQLAQAQAAAAQKQKQAAAAAAQAKVLAQAQMQTQTPAHQPHQPQAQPHVQ 1641



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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
 Frame = +1

Query: 169  PPRGA----GGVHGVDHSAGAGV-----HAQVLAQVLHARPVQAQRPHRRALQPRYQWRR 321
            PPRGA    G  HG      AGV     H     Q     P Q Q+P ++  QP YQ  +
Sbjct: 1531 PPRGAAPPPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQ--Q 1588

Query: 322  AARQPG 339
             A  PG
Sbjct: 1589 VAGPPG 1594



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>YIHF_ECOLI (P32128) Hypothetical protein yihF|
          Length = 490

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 233 KYWLKSFTRDQFKLNGRTAELSSLDINGDALHASLGLPP 349
           +Y   SF   QF  NG  + LS+LDI G      L L P
Sbjct: 176 EYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSP 214



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>RIBD_MYCTU (P71677) Riboflavin biosynthesis protein ribD [Includes:|
           Diaminohydroxyphosphoribosylaminopyrimidine deaminase
           (EC 3.5.4.26) (Riboflavin-specific deaminase);
           5-amino-6-(5-phosphoribosylamino)uracil reductase (EC
           1.1.1.193) (HTP reductase)]
          Length = 339

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 172 PRG-AGGVHGVDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQWRRAARQPGPAS 348
           P G AGG  G   +AG  V + VLA+ + A P++     +R   P   W+ A    G ++
Sbjct: 110 PNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSA 169

Query: 349 GA 354
            A
Sbjct: 170 AA 171



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>ATR_CAEEL (Q22258) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
            telangiectasia and Rad3-related protein homolog) (ATR
            homolog) (ATM-like protein 1) (Ce-atl-1)
          Length = 2531

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -2

Query: 336  RLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSVYSSARAMIDSMDAP 184
            ++ CS  P  S +E   +  LSL  SR +  S++L+V     A + S DAP
Sbjct: 1327 KMICSQKPEPSMIEQKTIDELSLGGSRRESFSRWLTVIILKCAEM-SEDAP 1376



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>Y064_MYCGE (P47310) Hypothetical protein MG064|
          Length = 1331

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -2

Query: 321  ASPLISRLESSAVRPLSLNWSRVKDLSQYLSVY 223
            ++ LI  L+  A+R  +L +S +K L+ +LS+Y
Sbjct: 1222 STTLIQELKKIAIRLKALGYSNLKILASFLSIY 1254



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>PER1_LYCES (P15003) Suberization-associated anionic peroxidase 1 precursor (EC|
           1.11.1.7) (TMP1)
          Length = 364

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
 Frame = -2

Query: 324 SASPLISRLESSAVRPLSLNWSRVKDLSQYL--------SVYSSARAMIDS-MDAPRPPG 172
           + SP    LES     L+LN ++ ++  +YL         V+S+ RA++DS +DA    G
Sbjct: 42  NVSPDFDSLESGVASILTLNNNKKRNSDKYLRQQLTPEACVFSAVRAVVDSAIDAETRMG 101

Query: 171 GEL 163
             L
Sbjct: 102 ASL 104



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>CLCN1_HUMAN (P35523) Chloride channel protein, skeletal muscle (Chloride channel|
            protein 1) (ClC-1)
          Length = 988

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 313  IDIEAGELGGAAVELELVAREGLEPVLERVLQRP 212
            + +  G++ G   ELELV   GLE  L  +LQ P
Sbjct: 940  LSLAPGKVEGELEELELVESPGLEEELADILQGP 973


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,042,664
Number of Sequences: 219361
Number of extensions: 558036
Number of successful extensions: 2240
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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