Clone Name | bastl15c06 |
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Clone Library Name | barley_pub |
>FGRL1_RAT (Q7TQM3) Fibroblast growth factor receptor-like 1 precursor (FGF| receptor-like protein 1) Length = 529 Score = 31.6 bits (70), Expect = 0.49 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -2 Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211 R ST+ GG+ + + SR + S + L ++ +R D Y+ + YS Sbjct: 287 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLISRARQDDAGMYICLGANTMGYSFRS 346 Query: 210 AMIDSMDAPRPPG 172 A + + P+PPG Sbjct: 347 AFLTVLPDPKPPG 359
>FGRL1_MOUSE (Q91V87) Fibroblast growth factor receptor-like 1 precursor (FGF| receptor-like protein 1) (Fibroblast growth factor receptor 5) Length = 529 Score = 31.6 bits (70), Expect = 0.49 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -2 Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211 R ST+ GG+ + + SR + S + L ++ +R D Y+ + YS Sbjct: 287 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLISRARQDDAGMYICLGANTMGYSFRS 346 Query: 210 AMIDSMDAPRPPG 172 A + + P+PPG Sbjct: 347 AFLTVLPDPKPPG 359
>FGRL1_HUMAN (Q8N441) Fibroblast growth factor receptor-like 1 precursor (FGF| receptor-like protein 1) (Fibroblast growth factor receptor 5) (FGFR-like protein) (FGF homologous factor receptor) Length = 504 Score = 31.2 bits (69), Expect = 0.64 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Frame = -2 Query: 372 RARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSAR 211 R ST+ GG+ + + SR + S + L + +R D Y+ + YS Sbjct: 291 RHNSTIDVGGQKFVVLPTGDVWSRPDGSYLNKLLITRARQDDAGMYICLGANTMGYSFRS 350 Query: 210 AMIDSMDAPRPPG 172 A + + P+PPG Sbjct: 351 AFLTVLPDPKPPG 363
>PE2R1_HUMAN (P34995) Prostaglandin E2 receptor, EP1 subtype (Prostanoid EP1| receptor) (PGE receptor, EP1 subtype) Length = 402 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 Query: 304 RYQWRRAARQPGPASGAHRRTRAG 375 R +WRR +R+P PASG R R G Sbjct: 231 RARWRRRSRRPPPASGPDSRRRWG 254
>PLSX_DEIRA (Q46578) Fatty acid/phospholipid synthesis protein plsX| Length = 360 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = +1 Query: 199 VDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQWRRAARQPGPASGAHRRTRAG 375 +D AGAG++ RP Q +RP R Q RRAA +P P S A R +G Sbjct: 303 LDRGAGAGLY----------RPRQRRRPRR-------QKRRAACRPRPRSAAGRAPGSG 344
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/62 (29%), Positives = 33/62 (53%) Frame = -2 Query: 366 RSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSVYSSARAMIDSMDA 187 ++ VSA G R+ SP I L++ PLSL + V+ L++ + ++S ++ + Sbjct: 223 QAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQ 281 Query: 186 PR 181 PR Sbjct: 282 PR 283
>FGRL1_CHICK (Q7T2H2) Fibroblast growth factor receptor-like 1 precursor| Length = 487 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -2 Query: 375 TRARSTVSAGGRPRLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSV------YSSA 214 ++ ST+ GG+ + + SR + S + L + ++ +D Y+ + YS Sbjct: 284 SKYNSTIDVGGQKFVVLPTGEVWSRPDGSYLNKLMITRAKEEDAGMYICLGANTMGYSFR 343 Query: 213 RAMIDSMDAPRPP 175 A + + P+PP Sbjct: 344 SAFLTVLPDPKPP 356
>LIPS_RAT (P15304) Hormone-sensitive lipase (EC 3.1.1.79) (HSL)| Length = 1068 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Frame = -2 Query: 318 SPLISRLESSAVRPLSLNWSRV------KDLSQYLSVYSSARAMIDSMDAPRPPGGELFG 157 S +++RL+ A++ S W D+ +YL+ S + + P P GG + Sbjct: 203 SGILARLQKLAIQQPSQEWKTFLDCVTESDMEKYLNSSSKS-------NPPEPSGGTVIP 255 Query: 156 AVLXXXXXXXXXXXXRIGGEIPAGWRG 76 L GG++P G +G Sbjct: 256 GTLPSKQKPDCGKMSGYGGKLPHGKKG 282
>H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)| (HS6ST-3) (mHS6ST-3) Length = 470 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +1 Query: 256 ARPVQAQRPHRRALQPRYQWRRAARQPGPASGAHRRTR 369 ARP P RRA P +W R + P P G +R Sbjct: 46 ARPPAVPSPARRAQAPLDEWERRPQLPPPPRGPPEGSR 83
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/52 (30%), Positives = 21/52 (40%) Frame = +1 Query: 157 PKKLPPRGAGGVHGVDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQ 312 P +L A +A A A+VLAQ A +PH+ QP Q Sbjct: 1590 PAQLAQAQAAAAQKQKQAAAAAAQAKVLAQAQMQTQTPAHQPHQPQAQPHVQ 1641
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.7 bits (60), Expect = 7.1 Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 9/66 (13%) Frame = +1 Query: 169 PPRGA----GGVHGVDHSAGAGV-----HAQVLAQVLHARPVQAQRPHRRALQPRYQWRR 321 PPRGA G HG AGV H Q P Q Q+P ++ QP YQ + Sbjct: 1531 PPRGAAPPPGAPHGPPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQQPPYQ--Q 1588 Query: 322 AARQPG 339 A PG Sbjct: 1589 VAGPPG 1594
>YIHF_ECOLI (P32128) Hypothetical protein yihF| Length = 490 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/39 (41%), Positives = 19/39 (48%) Frame = +2 Query: 233 KYWLKSFTRDQFKLNGRTAELSSLDINGDALHASLGLPP 349 +Y SF QF NG + LS+LDI G L L P Sbjct: 176 EYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSP 214
>RIBD_MYCTU (P71677) Riboflavin biosynthesis protein ribD [Includes:| Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)] Length = 339 Score = 27.7 bits (60), Expect = 7.1 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +1 Query: 172 PRG-AGGVHGVDHSAGAGVHAQVLAQVLHARPVQAQRPHRRALQPRYQWRRAARQPGPAS 348 P G AGG G +AG V + VLA+ + A P++ +R P W+ A G ++ Sbjct: 110 PNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSA 169 Query: 349 GA 354 A Sbjct: 170 AA 171
>ATR_CAEEL (Q22258) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein homolog) (ATR homolog) (ATM-like protein 1) (Ce-atl-1) Length = 2531 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -2 Query: 336 RLACSASPLISRLESSAVRPLSLNWSRVKDLSQYLSVYSSARAMIDSMDAP 184 ++ CS P S +E + LSL SR + S++L+V A + S DAP Sbjct: 1327 KMICSQKPEPSMIEQKTIDELSLGGSRRESFSRWLTVIILKCAEM-SEDAP 1376
>Y064_MYCGE (P47310) Hypothetical protein MG064| Length = 1331 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = -2 Query: 321 ASPLISRLESSAVRPLSLNWSRVKDLSQYLSVY 223 ++ LI L+ A+R +L +S +K L+ +LS+Y Sbjct: 1222 STTLIQELKKIAIRLKALGYSNLKILASFLSIY 1254
>PER1_LYCES (P15003) Suberization-associated anionic peroxidase 1 precursor (EC| 1.11.1.7) (TMP1) Length = 364 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Frame = -2 Query: 324 SASPLISRLESSAVRPLSLNWSRVKDLSQYL--------SVYSSARAMIDS-MDAPRPPG 172 + SP LES L+LN ++ ++ +YL V+S+ RA++DS +DA G Sbjct: 42 NVSPDFDSLESGVASILTLNNNKKRNSDKYLRQQLTPEACVFSAVRAVVDSAIDAETRMG 101 Query: 171 GEL 163 L Sbjct: 102 ASL 104
>CLCN1_HUMAN (P35523) Chloride channel protein, skeletal muscle (Chloride channel| protein 1) (ClC-1) Length = 988 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 313 IDIEAGELGGAAVELELVAREGLEPVLERVLQRP 212 + + G++ G ELELV GLE L +LQ P Sbjct: 940 LSLAPGKVEGELEELELVESPGLEEELADILQGP 973 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,042,664 Number of Sequences: 219361 Number of extensions: 558036 Number of successful extensions: 2240 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2240 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)