ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl15c06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055A13, full insert sequence Length = 4117 Score = 218 bits (110), Expect = 1e-53 Identities = 155/170 (91%) Strand = Plus / Plus Query: 194 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 263 Query: 254 acgcgcgaccagttcaagctcaacggccgcaccgccgagctctccagcctcgatatcaat 313 | ||||||||||||||||| | ||||||||||| ||||||||| |||||||||||| Sbjct: 264 tcccgcgaccagttcaagctgcagggccgcaccgcgcagctctccaatctcgatatcaat 323 Query: 314 ggcgacgcgctgcacgccagcctgggcctgcctccggcgctcaccgtcga 363 ||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 324 ggcgacgcgttgcacgcgagcctggtgctgcctccgtcgctcgccgtcga 373 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 77 cctctccatcccgccggaatctcgcctccgatccggcggc 116 |||||||||| |||||||||||| |||||||||||||||| Sbjct: 41 cctctccatctcgccggaatctcacctccgatccggcggc 80
>ref|XM_473987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3582 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Plus Query: 194 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 60 Query: 254 acgcgcgaccagttcaagctcaacggccgcaccgccgagctctcca 299 | ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 61 tcccgcgaccagttcaagctgcagggccgcaccgcgcagctctcca 106 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 305 gatatcaatggcgacgcgctgcacgccagcctgggcctgcctccggcgctcaccgtcga 363 |||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 199 gatatcaatggcgacgcgttgcacgcgagcctggtgctgcctccgtcgctcgccgtcga 257
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 194 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32026183 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 32026124 Query: 254 acgcgcgaccagttcaagctcaacggccgcaccgccgagctctcca 299 | ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 32026123 tcccgcgaccagttcaagctgcagggccgcaccgcgcagctctcca 32026078 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 305 gatatcaatggcgacgcgctgcacgccagcctgggcctgcctccggcgctcaccgtcga 363 |||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 32025985 gatatcaatggcgacgcgttgcacgcgagcctggtgctgcctccgtcgctcgccgtcga 32025927 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 77 cctctccatcccgccggaatctcgcctccgatccggcggc 116 |||||||||| |||||||||||| |||||||||||||||| Sbjct: 32026346 cctctccatctcgccggaatctcacctccgatccggcggc 32026307 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 33562058 ccgccaccgccgccgacacc 33562077 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacacc 140 ||||||||||||| ||||| |||||||| Sbjct: 3842960 cggcacgcccgccgccgccaccgacacc 3842933
>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete sequence Length = 94903 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 194 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8911 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 8852 Query: 254 acgcgcgaccagttcaagctcaacggccgcaccgccgagctctcca 299 | ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 8851 tcccgcgaccagttcaagctgcagggccgcaccgcgcagctctcca 8806 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 305 gatatcaatggcgacgcgctgcacgccagcctgggcctgcctccggcgctcaccgtcga 363 |||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 8713 gatatcaatggcgacgcgttgcacgcgagcctggtgctgcctccgtcgctcgccgtcga 8655 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 76 ccctctccatcccgccggaatctcgcctccgatccggcggc 116 ||||||||||| |||||||||||| |||||||||||||||| Sbjct: 9075 ccctctccatctcgccggaatctcacctccgatccggcggc 9035
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 155 bits (78), Expect = 1e-34 Identities = 99/106 (93%) Strand = Plus / Minus Query: 194 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46890 atggagtcgatcatagcgcgggcgctggagtacacgctcaagtactggctcaagtccttc 46831 Query: 254 acgcgcgaccagttcaagctcaacggccgcaccgccgagctctcca 299 | ||||||||||||||||| | ||||||||||| ||||||||| Sbjct: 46830 tcccgcgaccagttcaagctgcagggccgcaccgcgcagctctcca 46785 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 305 gatatcaatggcgacgcgctgcacgccagcctgggcctgcctccggcgctcaccgtcga 363 |||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| Sbjct: 46692 gatatcaatggcgacgcgttgcacgcgagcctggtgctgcctccgtcgctcgccgtcga 46634 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 77 cctctccatcccgccggaatctcgcctccgatccggcggc 116 |||||||||| |||||||||||| |||||||||||||||| Sbjct: 47053 cctctccatctcgccggaatctcacctccgatccggcggc 47014
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Plus Query: 115 gcacgcccgccaccgccgccgacaccg 141 ||||||||||||||||||||| ||||| Sbjct: 1975742 gcacgcccgccaccgccgccgtcaccg 1975768
>emb|AL833775.7| Mouse DNA sequence from clone RP23-135L5 on chromosome 4, complete sequence Length = 194640 Score = 46.1 bits (23), Expect = 0.081 Identities = 29/31 (93%) Strand = Plus / Plus Query: 51 cccctaccctgtctgtccccctcctccctct 81 ||||| |||||||||||| |||||||||||| Sbjct: 111772 cccctcccctgtctgtccacctcctccctct 111802
>ref|NM_190778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1257 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cgccaccgccgccgacaccggc 143 |||||||||||||||||||||| Sbjct: 39 cgccaccgccgccgacaccggc 18
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.32 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 118 cgcccgccaccgccgccgacaccggcaccg 147 |||||||| ||||||||||||||||||||| Sbjct: 2990251 cgcccgcc-ccgccgccgacaccggcaccg 2990223
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 cgccgccgacaccggcaccgga 149 |||||||||||||||||||||| Sbjct: 2446158 cgccgccgacaccggcaccgga 2446179
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cgccaccgccgccgacaccggc 143 |||||||||||||||||||||| Sbjct: 37657563 cgccaccgccgccgacaccggc 37657542 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccg 141 ||||||||||||||||||||| Sbjct: 11725195 ccgccaccgccgccgacaccg 11725175
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cgccaccgccgccgacaccggc 143 |||||||||||||||||||||| Sbjct: 118037 cgccaccgccgccgacaccggc 118016
>dbj|AK073453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041H22, full insert sequence Length = 1612 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cgccaccgccgccgacaccggc 143 |||||||||||||||||||||| Sbjct: 72 cgccaccgccgccgacaccggc 51
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 286 cgccgagctctccagcctcga 306 ||||||||||||||||||||| Sbjct: 100799 cgccgagctctccagcctcga 100779
>ref|NM_183703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccg 141 ||||||||||||||||||||| Sbjct: 877 ccgccaccgccgccgacaccg 857
>ref|XM_470722.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 94 ccggcggcacgcccgccaccg 74
>gb|AC102654.7| Mus musculus chromosome 1, clone RP23-2K13, complete sequence Length = 245404 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctgtctgtccccctcctccctctcc 83 |||||||||||||||||| |||||| Sbjct: 186270 ctgtctgtccccctcctctctctcc 186294
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacaccg 141 |||||||||||||| | |||||||||||| Sbjct: 1213006 cggcacgcccgccagcaccgccgacaccg 1212978 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccgacacc 140 |||| |||||||||||||||||||| Sbjct: 624321 cacggccgccaccgccgccgacacc 624297
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 14763979 ccggcggcacgcccgccaccg 14763999 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 33488682 cgcccgccaccgccgccgac 33488663
>gb|AC144502.5| Medicago truncatula clone mth2-5p10, complete sequence Length = 91507 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 219 tggagtacacgctcaagtactggctcaagtccttcac 255 |||| ||||||||||| ||||||||||| || ||||| Sbjct: 27956 tggaatacacgctcaaatactggctcaaatcattcac 27920
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 4569882 ccggcggcacgcccgccaccg 4569862
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacaccg 141 |||||||||||||| | |||||||||||| Sbjct: 179063 cggcacgcccgccagcaccgccgacaccg 179035
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccgacacc 140 |||| |||||||||||||||||||| Sbjct: 281047 cacggccgccaccgccgccgacacc 281023
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 cccctcctccctctccatccc 88 ||||||||||||||||||||| Sbjct: 105492 cccctcctccctctccatccc 105472
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccgacacc 140 |||| |||||||||||||||||||| Sbjct: 281104 cacggccgccaccgccgccgacacc 281080
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacaccg 141 |||||||||||||| | |||||||||||| Sbjct: 227210 cggcacgcccgccagcaccgccgacaccg 227182
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 102891 ccggcggcacgcccgccaccg 102911
>gb|AC022124.6| Homo sapiens chromosome 5 clone CTD-2075G19, complete sequence Length = 120733 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tctgtccccctcctccctctc 82 ||||||||||||||||||||| Sbjct: 71577 tctgtccccctcctccctctc 71557 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tctgtccccctcctccctctc 82 ||||||||||||||||||||| Sbjct: 71554 tctgtccccctcctccctctc 71534
>tpg|BK000083.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cellulose synthase-like A5 gene, complete cds Length = 5430 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 5277 ccggcggcacgcccgccaccg 5257
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 14758513 ccggcggcacgcccgccaccg 14758533 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 33579154 cgcccgccaccgccgccgac 33579135
>gb|AC008390.7|AC008390 Homo sapiens chromosome 5 clone CTC-235M3, complete sequence Length = 121931 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tctgtccccctcctccctctc 82 ||||||||||||||||||||| Sbjct: 72772 tctgtccccctcctccctctc 72752
>gb|AC010127.12| Homo sapiens BAC clone RP11-2I8 from 2, complete sequence Length = 190066 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ctgtccccctcctccctctcc 83 ||||||||||||||||||||| Sbjct: 182304 ctgtccccctcctccctctcc 182284
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccg 141 ||||||||||||||||||||| Sbjct: 5995327 ccgccaccgccgccgacaccg 5995307 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gcgcgaccagttcaagctcaacggc 280 |||||||| |||||||||||||||| Sbjct: 1091689 gcgcgacctgttcaagctcaacggc 1091665
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccg 141 ||||||||||||||||||||| Sbjct: 64363 ccgccaccgccgccgacaccg 64343
>dbj|AK110517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-G10, full insert sequence Length = 881 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ccggcggcacgcccgccaccg 129 ||||||||||||||||||||| Sbjct: 288 ccggcggcacgcccgccaccg 268
>dbj|AK105998.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H08, full insert sequence Length = 1488 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccg 141 ||||||||||||||||||||| Sbjct: 409 ccgccaccgccgccgacaccg 389
>gb|M60733.1|BLYCLDAB Hordeum vulgare cold-regulated mRNA, partial cds Length = 770 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 ccgccgccgacaccggcaccg 147 ||||||||||||||||||||| Sbjct: 368 ccgccgccgacaccggcaccg 348
>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151057 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 cccctcctccctctccatccc 88 ||||||||||||||||||||| Sbjct: 128987 cccctcctccctctccatccc 128967
>emb|AL121673.41|HSA305P22 Human DNA sequence from clone RP11-305P22 on chromosome 20 Contains the 3' end of the C20orf11 gene, the C20orf59 gene, the BHLHB4 gene for basic helix-loop-helix domain containing (class B) 4, the C20orf51 gene, a novel gene and seven CpG islands, complete sequence Length = 151163 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 ctgcacgccagcctgggcctgcctc 347 |||||| |||||||||||||||||| Sbjct: 44307 ctgcactccagcctgggcctgcctc 44283
>gb|AD000004.1|MSGY224 Mycobacterium tuberculosis sequence from clone y224 Length = 40051 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccgacacc 140 |||| |||||||||||||||||||| Sbjct: 8937 cacggccgccaccgccgccgacacc 8913
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 ctcgcctccgatccggcggc 116 |||||||||||||||||||| Sbjct: 63869 ctcgcctccgatccggcggc 63888
>ref|XM_482612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 64 tccccctcctccctctccat 83
>ref|XM_507242.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524F03.33 mRNA Length = 1222 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 84 tccccctcctccctctccat 103
>ref|XM_474182.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 64 ccgccaccgccgccgacacc 45
>ref|XM_470042.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 167 cgcccgccaccgccgccgac 186
>ref|XM_526315.1| PREDICTED: Pan troglodytes similar to kyphoscoliosis (LOC470932), mRNA Length = 2619 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctggagtacacgctcaagt 236 |||||||||||||||||||| Sbjct: 1917 gctggagtacacgctcaagt 1936
>ref|XM_477837.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 430 cacgcccgccaccgccgccg 449
>ref|XM_474523.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2274 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacacc 140 ||||||||||||| ||||| |||||||| Sbjct: 298 cggcacgcccgccgccgccaccgacacc 271
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 1653953 ccgccaccgccgccgacacc 1653972
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tctcgcctccgatccggcgg 115 |||||||||||||||||||| Sbjct: 1302345 tctcgcctccgatccggcgg 1302326
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 caacggccgcaccgccgagc 293 |||||||||||||||||||| Sbjct: 4368180 caacggccgcaccgccgagc 4368161
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccgccaccgccgccgacac 139 |||||||||||||||||||| Sbjct: 152077 cccgccaccgccgccgacac 152058
>ref|XM_360326.1| Magnaporthe grisea 70-15 hypothetical protein (MG05700.4) partial mRNA Length = 5343 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 4799 ccgccaccgccgccgacacc 4780
>ref|XM_367530.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07441.4) partial mRNA Length = 3030 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 1463 ccgccaccgccgccgacacc 1444
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccggcggcacgcccgccacc 128 |||||||||||||||||||| Sbjct: 1479116 ccggcggcacgcccgccacc 1479135
>gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, complete sequence Length = 174177 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgctgcacgccagcctggg 339 |||||||||||||||||||| Sbjct: 101945 gcgctgcacgccagcctggg 101964
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 17871 cgcccgccaccgccgccgac 17852
>gb|AC073846.6| Homo sapiens BAC clone RP11-622P13 from 7, complete sequence Length = 123004 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 ccagcctgggcctgcctccg 349 |||||||||||||||||||| Sbjct: 96061 ccagcctgggcctgcctccg 96080
>emb|AJ843191.1| Azospirillum brasilense partial vppII gene for proton-translocating inorganic pyrophosphatase Length = 597 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ccgatccggcggcacgcccg 123 |||||||||||||||||||| Sbjct: 304 ccgatccggcggcacgcccg 285
>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence Length = 245757 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 cccctaccctgtctgtccccctcc 74 ||||||||||| |||||||||||| Sbjct: 212778 cccctaccctgcctgtccccctcc 212801
>gb|AC104866.10| Mus musculus chromosome 17, clone RP23-268C14, complete sequence Length = 176240 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ccctcctccctctccatccc 88 |||||||||||||||||||| Sbjct: 117797 ccctcctccctctccatccc 117778
>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence Length = 219711 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ctcccctaccctgtctgtcc 68 |||||||||||||||||||| Sbjct: 84087 ctcccctaccctgtctgtcc 84106
>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence Length = 221545 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 tctgtccccctcctccctctccat 85 |||||| ||||||||||||||||| Sbjct: 74176 tctgtctccctcctccctctccat 74199
>gb|BC047425.1| Homo sapiens cDNA clone IMAGE:5268268 Length = 2078 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 555 ctaccctgtctgtccccctactcc 578
>gb|BC094789.1| Homo sapiens cDNA clone IMAGE:4838781 Length = 2067 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 555 ctaccctgtctgtccccctactcc 578
>gb|BC067875.1| Homo sapiens cDNA clone IMAGE:4829840 Length = 2156 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 555 ctaccctgtctgtccccctactcc 578
>emb|AL607022.11| Human DNA sequence from clone RP11-323N10 on chromosome 10 Contains the 5' end of the gene for alpha-catenin-like protein (MGC26194) (VR22), a aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene and a CpG island, complete sequence Length = 121210 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 94291 cgctgcacgccagcctgggc 94272
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 cgcgctgcacgccagcctgggcct 342 |||||||||||||||||| ||||| Sbjct: 2995607 cgcgctgcacgccagcctcggcct 2995630
>emb|AL441992.17| Human DNA sequence from clone RP11-545E17 on chromosome 9 Contains the gene for protein kinase PKNbeta (pknbeta), a novel gene, the ZDHHC12 gene for zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), the gene for ZYG homolog, a novel gene (FLJ10743), the ENDOG gene for endonuclease G, a novel gene (HSPC109), the 3' end of the CCBL1 gene for cysteine conjugate-beta lyase; cytoplasmic (glutamine transaminase K, kyneurenine aminotransferase) and six CpG islands, complete sequence Length = 166664 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 74702 cgctgcacgccagcctgggc 74721
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccctgtctgtccccctcctccctc 80 ||||| |||||||||||||||||| Sbjct: 3133 ccctgactgtccccctcctccctc 3110
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 ctcgcctccgatccggcggc 116 |||||||||||||||||||| Sbjct: 53812 ctcgcctccgatccggcggc 53793
>gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, complete sequence Length = 63480 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 59498 cgctgcacgccagcctgggc 59517
>emb|AL137001.23| Human DNA sequence from clone RP11-301J16 on chromosome 13 Contains a FSH primary response (LRPR1 homolog,rat) 1 (FSHPRH1) pseudogene, a novel protein similar general transcription factor II, i (GTF2I) (DIWS SPIN IB291 BAP135 BTKAP1 TFII-I WBSCR6 BAP-135), a pseudogene similar to part of ubiquitin specific protease 24 (USP24) (KIAA1057), two novel genes and the 5' end of a FSH primary response (LRPR1 homolog,rat) 1 (FSHPRH1) pseudogene, complete sequence Length = 152319 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 32280 ctaccctgtctgtccccctactcc 32303
>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the SOX1 gene for SRY (sex determining region Y)-box 1 protein and 7 CpG islands, complete sequence Length = 147665 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 29410 cgctgcacgccagcctgggc 29391
>gb|AC011598.33| Homo sapiens 12 BAC RP11-778N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171787 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 94490 cgctgcacgccagcctgggc 94509
>gb|AE008864.1| Salmonella typhimurium LT2, section 168 of 220 of the complete genome Length = 22530 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 9432 gcacgcccgccaccgccgcc 9451
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 176354 gcacgcccgccaccgccgcc 176373
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 43397 gcacgcccgccaccgccgcc 43416
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cgcccgccaccgccgccgacaccg 141 |||||||||||||||||| ||||| Sbjct: 92621 cgcccgccaccgccgccgccaccg 92644
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 agctcaacggccgcaccgccgagc 293 |||||||| ||||||||||||||| Sbjct: 148805 agctcaaccgccgcaccgccgagc 148828
>emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0080E14, complete sequence Length = 148064 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 113 cggcacgcccgccaccgccgccgacacc 140 ||||||||||||| ||||| |||||||| Sbjct: 69941 cggcacgcccgccgccgccaccgacacc 69914
>emb|AL627281.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 17/20 Length = 265050 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 141328 gcacgcccgccaccgccgcc 141309
>emb|AL121800.1|DMBN5I9 Drosophila melanogaster BAC clone BACN5I9 Length = 96433 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgatatcaatggcgacgcg 322 |||||||||||||||||||| Sbjct: 39356 tcgatatcaatggcgacgcg 39375
>emb|AJ309022.1|GFL309022 Grapevine fleck virus complete genome, isolate MT48, genomic RNA Length = 7564 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccgccgagctctccagcctc 304 |||||||||||||||||||| Sbjct: 6863 ccgccgagctctccagcctc 6882
>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence Length = 234359 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccctcctccctctccatccc 88 |||||||||||||||||||| Sbjct: 174579 ccctcctccctctccatccc 174598
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccccctcctccctctccatc 86 |||||||||||||||||||| Sbjct: 113544 ccccctcctccctctccatc 113525
>gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence Length = 173833 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgctgcacgccagcctggg 339 |||||||||||||||||||| Sbjct: 101601 gcgctgcacgccagcctggg 101620
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgccgccgacaccggcaccg 147 |||||||||||||||||||| Sbjct: 3635455 cgccgccgacaccggcaccg 3635474
>gb|AC105351.2| Drosophila melanogaster X BAC RP98-34B12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179795 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 tcgatatcaatggcgacgcg 322 |||||||||||||||||||| Sbjct: 15823 tcgatatcaatggcgacgcg 15842
>dbj|AK090526.1| Homo sapiens cDNA FLJ33207 fis, clone ADRGL2007906, highly similar to Mus musculus mRNA for Ky protein Length = 2045 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctggagtacacgctcaagt 236 |||||||||||||||||||| Sbjct: 1346 gctggagtacacgctcaagt 1365
>gb|AC021242.10| Homo sapiens chromosome 8, clone RP11-375N15, complete sequence Length = 196152 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tgtccccctcctccctctcc 83 |||||||||||||||||||| Sbjct: 94872 tgtccccctcctccctctcc 94853
>gb|AC099665.2| Homo sapiens chromosome 3 clone RP11-15B21, complete sequence Length = 192063 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 70622 cgctgcacgccagcctgggc 70603
>gb|AC105288.3| Homo sapiens BAC clone RP11-554F9 from 4, complete sequence Length = 142915 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 93690 cgctgcacgccagcctgggc 93709
>ref|XM_944169.1| PREDICTED: Homo sapiens hypothetical protein LOC348021 (LOC348021), mRNA Length = 2129 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 549 ctaccctgtctgtccccctactcc 572
>ref|XM_933050.1| PREDICTED: Homo sapiens hypothetical protein LOC348021 (LOC348021), mRNA Length = 2129 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ctaccctgtctgtccccctcctcc 77 ||||||||||||||||||| |||| Sbjct: 549 ctaccctgtctgtccccctactcc 572
>gb|AC010768.10| Homo sapiens chromosome 11, clone RP11-58K22, complete sequence Length = 192391 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 2749 cgctgcacgccagcctgggc 2768
>ref|NM_178554.3| Homo sapiens kyphoscoliosis peptidase (KY), mRNA Length = 2045 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gctggagtacacgctcaagt 236 |||||||||||||||||||| Sbjct: 1346 gctggagtacacgctcaagt 1365
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 9467 cgcccgccaccgccgccgac 9486
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccgccaccgccgccgacac 139 |||||||||||||||||||| Sbjct: 7026819 cccgccaccgccgccgacac 7026800
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 26432626 cacgcccgccaccgccgccg 26432645 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 26427640 cacgcccgccaccgccgccg 26427659 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 21411590 tccccctcctccctctccat 21411609
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 14763769 cacgcccgccaccgccgccg 14763750
>gb|AF204951.2|AF204951 Ectocarpus siliculosus virus, complete genome Length = 335593 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 227060 ccgccaccgccaccgccaccggcaccgg 227033 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 227054 ccgccaccgccaccggcaccggcaccgg 227027
>gb|AC093391.5| Homo sapiens BAC clone RP11-798L22 from 2, complete sequence Length = 121496 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gctgcacgccagcctgggcc 341 |||||||||||||||||||| Sbjct: 45599 gctgcacgccagcctgggcc 45618
>gb|AE009508.1| Brucella melitensis 16M chromosome I, section 65 of 195 of the complete sequence Length = 10586 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 tctcgcctccgatccggcgg 115 |||||||||||||||||||| Sbjct: 772 tctcgcctccgatccggcgg 791
>gb|AC098966.3| Homo sapiens chromosome 16 clone RP11-465H19, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 49128 cgctgcacgccagcctgggc 49109
>gb|AC090551.6| Homo sapiens chromosome 16 clone RP11-197K24, complete sequence Length = 174737 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 151421 cgctgcacgccagcctgggc 151440
>gb|AC109912.10| Homo sapiens 3 BAC RP11-640G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86114 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gctggagtacacgctcaagt 236 |||||||||||||||||||| Sbjct: 46304 gctggagtacacgctcaagt 46285
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 1147910 ccgccaccgccaccgccaccggcaccgg 1147883
>gb|AC009161.14| Homo sapiens chromosome 16 clone RP11-75D3, complete sequence Length = 180222 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 177199 cgctgcacgccagcctgggc 177180
>gb|AF275943.1|AF275943 Streptomyces avermitilis avermectin polyketide synthase gene, partial cds Length = 11096 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 10214 ccgccaccgccaccgccaccggcaccgg 10187
>gb|AC109338.17| Homo sapiens chromosome 15, clone RP11-228G18, complete sequence Length = 141868 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgctgcacgccagcctggg 339 |||||||||||||||||||| Sbjct: 91128 gcgctgcacgccagcctggg 91147
>gb|AC125603.7| Homo sapiens 12 BAC RP11-497G19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151111 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 28267 cgctgcacgccagcctgggc 28286
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 3522501 gcacgcccgccaccgccgcc 3522520
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 88536 cacgcccgccaccgccgccg 88517
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgccgccgacaccggcaccg 147 |||||||||||||||||||| Sbjct: 7244992 cgccgccgacaccggcaccg 7245011 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcaccgccgagctctccagc 301 |||||||||||||||||||| Sbjct: 3641545 gcaccgccgagctctccagc 3641564
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tctcgcctccgatccggcgg 115 |||||||||||||||||||| Sbjct: 1320311 tctcgcctccgatccggcgg 1320292
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 2571121 ccgccaccgccgccgacacc 2571140 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgccgacaccggcaccggag 150 |||||||||||||||||||| Sbjct: 1996705 cgccgacaccggcaccggag 1996724 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ccaccgccgccgacaccggcaccg 147 ||||||||||||||||| |||||| Sbjct: 849783 ccaccgccgccgacacctgcaccg 849760
>dbj|AP005447.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0035G02 Length = 159802 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 3374 cacgcccgccaccgccgccg 3355
>dbj|AK109389.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-F02, full insert sequence Length = 1234 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 cgcccgccaccgccgccgac 137 |||||||||||||||||||| Sbjct: 166 cgcccgccaccgccgccgac 185
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 82178 cacgcccgccaccgccgccg 82197 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 77192 cacgcccgccaccgccgccg 77211
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 162207 cacgcccgccaccgccgccg 162226 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cacgcccgccaccgccgccg 135 |||||||||||||||||||| Sbjct: 157221 cacgcccgccaccgccgccg 157240
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 15585 tccccctcctccctctccat 15604
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 111515 tccccctcctccctctccat 111534
>dbj|AK109485.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H04, full insert sequence Length = 1198 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 64 tccccctcctccctctccat 83
>dbj|AK103781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145G16, full insert sequence Length = 1224 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tccccctcctccctctccat 85 |||||||||||||||||||| Sbjct: 85 tccccctcctccctctccat 104
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 4098975 gcacgcccgccaccgccgcc 4098956
>emb|AL358340.6|CNS05TEB Human chromosome 14 DNA sequence BAC R-1007I4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201163 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 cgctgcacgccagcctgggc 340 |||||||||||||||||||| Sbjct: 140434 cgctgcacgccagcctgggc 140453
>gb|AE003427.3| Drosophila melanogaster chromosome X, section 11 of 74 of the complete sequence Length = 213230 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgatatcaatggcgacgcg 322 |||||||||||||||||||| Sbjct: 17853 tcgatatcaatggcgacgcg 17834
>gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromosome ul, complete sequence Length = 237797 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 155782 ccgccaccgccaccgccaccggcaccgg 155755
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ccgccgccgacaccggcacc 146 |||||||||||||||||||| Sbjct: 2274245 ccgccgccgacaccggcacc 2274226
>gb|U63847.1|SLU63847 Streptomyces lividans response regulator homolog gene, complete cds, and left LTR junction sequence Length = 6256 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 109 ccggcggcacgcccgccaccgccgccgacaccggca 144 |||||||||||||| || ||||||| | |||||||| Sbjct: 5051 ccggcggcacgccctccgccgccgcggccaccggca 5016
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cccgccaccgccgccgacac 139 |||||||||||||||||||| Sbjct: 7093286 cccgccaccgccgccgacac 7093267
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccgccaccgccgccgacacc 140 |||||||||||||||||||| Sbjct: 138347 ccgccaccgccgccgacacc 138366
>emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chromosome 17, complete sequence Length = 241014 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ctcccctaccctgtctgtcc 68 |||||||||||||||||||| Sbjct: 184022 ctcccctaccctgtctgtcc 184041
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tctcgcctccgatccggcgg 115 |||||||||||||||||||| Sbjct: 1317461 tctcgcctccgatccggcgg 1317442
>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence Length = 212184 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ctcccctaccctgtctgtcc 68 |||||||||||||||||||| Sbjct: 121541 ctcccctaccctgtctgtcc 121560
>gb|AC073446.16| Homo sapiens chromosome 15, clone RP11-757E13, complete sequence Length = 185123 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gcgctgcacgccagcctggg 339 |||||||||||||||||||| Sbjct: 58836 gcgctgcacgccagcctggg 58817
>dbj|D12589.1|STYLIV S.typhimurium genes for branched-chain amino acid permerases, complete cds Length = 4072 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcacgcccgccaccgccgcc 134 |||||||||||||||||||| Sbjct: 726 gcacgcccgccaccgccgcc 707
>dbj|AB032367.1| Streptomyces avermitilis polyketide synthase gene cluster (aveA1, aveA2, aveA3, aveA4) and aveC, aveE genes, complete cds Length = 64957 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 121 ccgccaccgccgccgacaccggcaccgg 148 ||||||||||| ||| |||||||||||| Sbjct: 10194 ccgccaccgccaccgccaccggcaccgg 10167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,839,178 Number of Sequences: 3902068 Number of extensions: 3839178 Number of successful extensions: 357893 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 353947 Number of HSP's gapped (non-prelim): 3945 length of query: 376 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 354 effective length of database: 17,147,199,772 effective search space: 6070108719288 effective search space used: 6070108719288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
