>ref|XM_479538.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3406

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 95/109 (87%), Gaps = 3/109 (2%)
 Strand = Plus / Plus

                                                                       
Query: 290 gaggtgcatgaacgcggcgtgcggcgcgcccgccccgacggcggccggggtgggcgagtg 349
           ||||||||||||||| |||||||| || || |||||| |  ||||  ||| ||| |||||
Sbjct: 310 gaggtgcatgaacgccgcgtgcggggccccggccccgtccccggc--gggaggg-gagtg 366

                                                            
Query: 350 gcggaagggctggccgctgcgatccggcggcttcgccctgctctgcgac 398
           | ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 367 gaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgac 415



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 71  tctccacatccagcggaaaactacgcttcccc 102
           |||||||||||| |||||||||||||||||||
Sbjct: 118 tctccacatccaccggaaaactacgcttcccc 149

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 95/109 (87%), Gaps = 3/109 (2%)
 Strand = Plus / Minus

                                                                            
Query: 290      gaggtgcatgaacgcggcgtgcggcgcgcccgccccgacggcggccggggtgggcgagtg 349
                ||||||||||||||| |||||||| || || |||||| |  ||||  ||| ||| |||||
Sbjct: 28739117 gaggtgcatgaacgccgcgtgcggggccccggccccgtccccggc--gggaggg-gagtg 28739061

                                                                 
Query: 350      gcggaagggctggccgctgcgatccggcggcttcgccctgctctgcgac 398
                | ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 28739060 gaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgac 28739012



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 71       tctccacatccagcggaaaactacgcttcccc 102
                |||||||||||| |||||||||||||||||||
Sbjct: 28739309 tctccacatccaccggaaaactacgcttcccc 28739278

>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1205_F02
          Length = 112862

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 95/109 (87%), Gaps = 3/109 (2%)
 Strand = Plus / Minus

                                                                         
Query: 290   gaggtgcatgaacgcggcgtgcggcgcgcccgccccgacggcggccggggtgggcgagtg 349
             ||||||||||||||| |||||||| || || |||||| |  ||||  ||| ||| |||||
Sbjct: 46678 gaggtgcatgaacgccgcgtgcggggccccggccccgtccccggc--gggaggg-gagtg 46622

                                                              
Query: 350   gcggaagggctggccgctgcgatccggcggcttcgccctgctctgcgac 398
             | ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 46621 gaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgac 46573



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 71    tctccacatccagcggaaaactacgcttcccc 102
             |||||||||||| |||||||||||||||||||
Sbjct: 46870 tctccacatccaccggaaaactacgcttcccc 46839

>dbj|AK101356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035A04, full
           insert sequence
          Length = 3406

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 95/109 (87%), Gaps = 3/109 (2%)
 Strand = Plus / Plus

                                                                       
Query: 290 gaggtgcatgaacgcggcgtgcggcgcgcccgccccgacggcggccggggtgggcgagtg 349
           ||||||||||||||| |||||||| || || |||||| |  ||||  ||| ||| |||||
Sbjct: 309 gaggtgcatgaacgccgcgtgcggggccccggccccgtccccggc--gggaggg-gagtg 365

                                                            
Query: 350 gcggaagggctggccgctgcgatccggcggcttcgccctgctctgcgac 398
           | ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 366 gaggaagggctggccgctgcgatccggtggcttcgccgtgctctgcgac 414



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 71  tctccacatccagcggaaaactacgcttcccc 102
           |||||||||||| |||||||||||||||||||
Sbjct: 117 tctccacatccaccggaaaactacgcttcccc 148

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 309     tgcggcgcgcccgccccgacggcggc 334
               ||||||||||||||| ||||||||||
Sbjct: 2749811 tgcggcgcgcccgccgcgacggcggc 2749836

>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 312   ggcgcgcccgccccgacggcg 332
             |||||||||||||||||||||
Sbjct: 69946 ggcgcgcccgccccgacggcg 69966

>ref|XM_419050.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 2410003C20
           (LOC420966), mRNA
          Length = 1618

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 328 cggcggccggggtgggcgagtggcggaag 356
           |||||||||||||||||| | ||||||||
Sbjct: 34  cggcggccggggtgggcgcggggcggaag 62

>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13,
              complete sequence
          Length = 178000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 312    ggcgcgcccgccccgacggcg 332
              |||||||||||||||||||||
Sbjct: 151137 ggcgcgcccgccccgacggcg 151117

>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0037P04, complete sequence
          Length = 139693

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   ggcgcgcccgccccgacggcg 332
             |||||||||||||||||||||
Sbjct: 78579 ggcgcgcccgccccgacggcg 78559

>emb|BX936269.2| Gallus gallus finished cDNA, clone ChEST953o3
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 328 cggcggccggggtgggcgagtggcggaag 356
           |||||||||||||||||| | ||||||||
Sbjct: 40  cggcggccggggtgggcgcggggcggaag 68

>emb|BX936222.2| Gallus gallus finished cDNA, clone ChEST950l10
          Length = 1621

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 328 cggcggccggggtgggcgagtggcggaag 356
           |||||||||||||||||| | ||||||||
Sbjct: 40  cggcggccggggtgggcgcggggcggaag 68

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 312     ggcgcgcccgccccgacggcg 332
               |||||||||||||||||||||
Sbjct: 5606019 ggcgcgcccgccccgacggcg 5605999

>emb|BX950392.1| Gallus gallus finished cDNA, clone ChEST957k6
          Length = 1621

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 328 cggcggccggggtgggcgagtggcggaag 356
           |||||||||||||||||| | ||||||||
Sbjct: 40  cggcggccggggtgggcgcggggcggaag 68

>dbj|AK071323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089I04, full
           insert sequence
          Length = 1726

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 312 ggcgcgcccgccccgacggcg 332
           |||||||||||||||||||||
Sbjct: 199 ggcgcgcccgccccgacggcg 219

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     gggctggccgctgcgatccgg 376
               |||||||||||||||||||||
Sbjct: 2053727 gggctggccgctgcgatccgg 2053747

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 312     ggcgcgcccgccccgacggcg 332
               |||||||||||||||||||||
Sbjct: 5672496 ggcgcgcccgccccgacggcg 5672476

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    ccgccccgacggcggccggg 338
              ||||||||||||||||||||
Sbjct: 108186 ccgccccgacggcggccggg 108205

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    cggaagggctggccgctgcg 370
              ||||||||||||||||||||
Sbjct: 523399 cggaagggctggccgctgcg 523418

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 302     cgcggcgtgcggcgcgcccgcccc 325
               |||||||||| |||||||||||||
Sbjct: 3073292 cgcggcgtgctgcgcgcccgcccc 3073315

>ref|XM_365659.1| Magnaporthe grisea 70-15 predicted protein (MG02361.4) partial mRNA
          Length = 1383

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 318  cccgccccgacggcggccggggtg 341
            ||||||||||||||||||| ||||
Sbjct: 991  cccgccccgacggcggccgaggtg 1014

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 302    cgcggcgtgcggcgcgcccgcccc 325
              |||||||||| |||||||||||||
Sbjct: 159200 cgcggcgtgctgcgcgcccgcccc 159177

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ggtgcggcgagccgaggcgg 184
               ||||||||||||||||||||
Sbjct: 1375088 ggtgcggcgagccgaggcgg 1375107

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       gcgccagccgccaccgatcg 56
                ||||||||||||||||||||
Sbjct: 10195734 gcgccagccgccaccgatcg 10195753

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 302     cgcggcgtgcggcgcgcccgcccc 325
               |||||||||| |||||||||||||
Sbjct: 4010822 cgcggcgtgctgcgcgcccgcccc 4010799

>emb|AJ428208.1|MMU428208 Mus musculus mRNA for phosphacan short isoform (RPTP-beta gene)
          Length = 3784

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 271  tggcggggatgggcgccgcgaggt 294
            |||||| |||||||||||||||||
Sbjct: 2970 tggcggagatgggcgccgcgaggt 2947

>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    gcgccagccgccaccgatcg 56
             ||||||||||||||||||||
Sbjct: 57147 gcgccagccgccaccgatcg 57166

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 252      cgcgcgcgacggccggccatggcg 275
                |||||||| |||||||||||||||
Sbjct: 21628276 cgcgcgcggcggccggccatggcg 21628299

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 37       gcgccagccgccaccgatcg 56
                ||||||||||||||||||||
Sbjct: 10193835 gcgccagccgccaccgatcg 10193854

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 296      catgaacgcggcgtgcggcgcgcccgcc 323
                |||| ||||||||||||||||| |||||
Sbjct: 28105419 catggacgcggcgtgcggcgcgtccgcc 28105392

>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0567G03
          Length = 196834

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    cgcgcgcgacggccggccatggcg 275
              |||||||| |||||||||||||||
Sbjct: 185460 cgcgcgcggcggccggccatggcg 185483

>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062E01
          Length = 161804

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   cgcgcgcgacggccggccatggcg 275
             |||||||| |||||||||||||||
Sbjct: 27207 cgcgcgcggcggccggccatggcg 27230

>dbj|AB113356.1| Sus scrofa 433 kb genomic segment, located between the non-classical
             and classical SLA class I gene cluster, clone: BAC 1051H9
          Length = 146382

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   cctcctcagctcctccctcc 146
             ||||||||||||||||||||
Sbjct: 97821 cctcctcagctcctccctcc 97802

>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1717_A09
          Length = 203132

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 296   catgaacgcggcgtgcggcgcgcccgcc 323
             |||| ||||||||||||||||| |||||
Sbjct: 95066 catggacgcggcgtgcggcgcgtccgcc 95039

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    ccgccccgacggcggccggg 338
              ||||||||||||||||||||
Sbjct: 110675 ccgccccgacggcggccggg 110694

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     gcggcgcgcccgccccgacg 329
               ||||||||||||||||||||
Sbjct: 2407835 gcggcgcgcccgccccgacg 2407854

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    cggaagggctggccgctgcg 370
              ||||||||||||||||||||
Sbjct: 434370 cggaagggctggccgctgcg 434351


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,009,987
Number of Sequences: 3902068
Number of extensions: 3009987
Number of successful extensions: 60201
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58310
Number of HSP's gapped (non-prelim): 1891
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)