ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_462832.1| Oryza sativa (japonica cultivar-group), predic... 408 e-111
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 408 e-111
3dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 408 e-111
4dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic D... 408 e-111
5gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 295 6e-77
6gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome... 295 6e-77
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 295 6e-77
8dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 6e-77
9dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 6e-77
10dbj|AK072825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 6e-77
11dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 6e-77
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 295 6e-77
13ref|XM_956946.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.36
14ref|XM_330944.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.36
15emb|X80052.1|NCFOX2 N.crassa fox-2 gene 44 0.36
16gb|AE005990.1| Caulobacter crescentus CB15 section 316 of 359 of... 42 1.4
17gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.4
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
19gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.7
20gb|BC072525.1| Rattus norvegicus paralemmin, mRNA (cDNA clone MG... 40 5.7
21gb|AF457546.1| Anopheles gambiae 30 kDa protein mRNA, complete cds 40 5.7
22emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.7
23emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.7
24ref|NM_130829.1| Rattus norvegicus paralemmin (Palm), mRNA 40 5.7
25gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.7
26dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 5.7
27gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 5.7
28gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Ho... 40 5.7
29ref|XM_553867.1| Anopheles gambiae str. PEST ENSANGP00000028522 ... 40 5.7
30gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1... 40 5.7
31gb|AY103647.1| Zea mays PCO142084 mRNA sequence 40 5.7
32dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.7
33dbj|AB058889.1| Rattus norvegicus mRNA for paralemmin, complete cds 40 5.7

>ref|XM_462832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3111

 Score =  408 bits (206), Expect = e-111
 Identities = 281/306 (91%)
 Strand = Plus / Plus

                                                                       
Query: 119 cagatccggcgccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgc 178
           |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 246 cagatccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgc 305

                                                                       
Query: 179 cgccatggcgaatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccga 238
           |||||||||   |||||||||||||||||| |||||||||||||| ||||||||||  ||
Sbjct: 306 cgccatggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtgga 365

                                                                       
Query: 239 ggccatgaagcgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcat 298
            |||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 366 cgccatgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcat 425

                                                                       
Query: 299 caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcct 358
           ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 426 caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcct 485

                                                                       
Query: 359 ctacctcgagatcgttgacaagcgcgatgccgctggccgcgtcctcccggagatgatcct 418
           ||||||||||||| | ||||||||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 486 ctacctcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcct 545

                 
Query: 419 catctg 424
           ||||||
Sbjct: 546 catctg 551



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  408 bits (206), Expect = e-111
 Identities = 281/306 (91%)
 Strand = Plus / Minus

                                                                            
Query: 119      cagatccggcgccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgc 178
                |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 10025978 cagatccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgc 10025919

                                                                            
Query: 179      cgccatggcgaatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccga 238
                |||||||||   |||||||||||||||||| |||||||||||||| ||||||||||  ||
Sbjct: 10025918 cgccatggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtgga 10025859

                                                                            
Query: 239      ggccatgaagcgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcat 298
                 |||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 10025858 cgccatgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcat 10025799

                                                                            
Query: 299      caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcct 358
                ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 10025798 caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcct 10025739

                                                                            
Query: 359      ctacctcgagatcgttgacaagcgcgatgccgctggccgcgtcctcccggagatgatcct 418
                ||||||||||||| | ||||||||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 10025738 ctacctcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcct 10025679

                      
Query: 419      catctg 424
                ||||||
Sbjct: 10025678 catctg 10025673



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>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score =  408 bits (206), Expect = e-111
 Identities = 281/306 (91%)
 Strand = Plus / Minus

                                                                          
Query: 119    cagatccggcgccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgc 178
              |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 106260 cagatccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgc 106201

                                                                          
Query: 179    cgccatggcgaatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccga 238
              |||||||||   |||||||||||||||||| |||||||||||||| ||||||||||  ||
Sbjct: 106200 cgccatggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtgga 106141

                                                                          
Query: 239    ggccatgaagcgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcat 298
               |||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 106140 cgccatgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcat 106081

                                                                          
Query: 299    caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcct 358
              ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 106080 caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcct 106021

                                                                          
Query: 359    ctacctcgagatcgttgacaagcgcgatgccgctggccgcgtcctcccggagatgatcct 418
              ||||||||||||| | ||||||||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 106020 ctacctcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcct 105961

                    
Query: 419    catctg 424
              ||||||
Sbjct: 105960 catctg 105955



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>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score =  408 bits (206), Expect = e-111
 Identities = 281/306 (91%)
 Strand = Plus / Minus

                                                                          
Query: 119    cagatccggcgccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgc 178
              |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 120471 cagatccggcgccatggagaagccgagcacgctgctggtccacttcgacaagggctccgc 120412

                                                                          
Query: 179    cgccatggcgaatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccga 238
              |||||||||   |||||||||||||||||| |||||||||||||| ||||||||||  ||
Sbjct: 120411 cgccatggccggtgagatcaaggcggatctcgagggcagcgacgtggccgccaaggtgga 120352

                                                                          
Query: 239    ggccatgaagcgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcat 298
               |||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||
Sbjct: 120351 cgccatgaagcgcgccgtcatgctcctcctcaacggcgagaccctccccaccctcttcat 120292

                                                                          
Query: 299    caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcct 358
              ||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 120291 caccgtcgtccgctacgtcctcccctccgaggaccacaccatccagaagctgctcctcct 120232

                                                                          
Query: 359    ctacctcgagatcgttgacaagcgcgatgccgctggccgcgtcctcccggagatgatcct 418
              ||||||||||||| | ||||||||||| ||||| ||| | | ||||||||||||||||||
Sbjct: 120231 ctacctcgagatcatcgacaagcgcgacgccgccggcaggggcctcccggagatgatcct 120172

                    
Query: 419    catctg 424
              ||||||
Sbjct: 120171 catctg 120166



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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0063D09 map S1559, complete sequence
          Length = 190721

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Minus

                                                                         
Query: 129   gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
             |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 21432 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 21373

                                                                         
Query: 189   aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
             || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 21372 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 21313

                                                                         
Query: 249   cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
             |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 21312 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 21253

                                                                         
Query: 309   cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
             ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 21252 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 21193

                                                                        
Query: 369   atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
             ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 21192 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 21134



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>gb|AC123897.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055G24
              map S20116S, complete sequence
          Length = 174210

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Minus

                                                                          
Query: 129    gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
              |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 170897 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 170838

                                                                          
Query: 189    aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
              || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 170837 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 170778

                                                                          
Query: 249    cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
              |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 170777 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 170718

                                                                          
Query: 309    cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
              ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 170717 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 170658

                                                                         
Query: 369    atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
              ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 170657 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 170599



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Minus

                                                                           
Query: 129     gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
               |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 3653760 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 3653701

                                                                           
Query: 189     aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
               || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 3653700 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 3653641

                                                                           
Query: 249     cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
               |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 3653640 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 3653581

                                                                           
Query: 309     cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
               ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 3653580 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 3653521

                                                                          
Query: 369     atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
               ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 3653520 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 3653462



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>dbj|AK120719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G07, full
           insert sequence
          Length = 3332

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 129 gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
           |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 111 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 170

                                                                       
Query: 189 aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
           || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 171 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 230

                                                                       
Query: 249 cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
           |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 231 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 290

                                                                       
Query: 309 cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
           ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 291 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 350

                                                                      
Query: 369 atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
           ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 351 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 409



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>dbj|AK120713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A09, full
           insert sequence
          Length = 3332

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 129 gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
           |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 111 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 170

                                                                       
Query: 189 aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
           || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 171 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 230

                                                                       
Query: 249 cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
           |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 231 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 290

                                                                       
Query: 309 cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
           ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 291 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 350

                                                                      
Query: 369 atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
           ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 351 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 409



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>dbj|AK072825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136B14, full
           insert sequence
          Length = 1667

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 129 gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
           |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 75  gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 134

                                                                       
Query: 189 aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
           || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 135 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 194

                                                                       
Query: 249 cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
           |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 195 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 254

                                                                       
Query: 309 cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
           ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 255 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 314

                                                                      
Query: 369 atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
           ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 315 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 373



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>dbj|AK069716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F21, full
           insert sequence
          Length = 3363

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 129 gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
           |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 142 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 201

                                                                       
Query: 189 aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
           || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 202 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 261

                                                                       
Query: 249 cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
           |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 262 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 321

                                                                       
Query: 309 cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
           ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 322 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 381

                                                                      
Query: 369 atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
           ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 382 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 440



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  295 bits (149), Expect = 6e-77
 Identities = 262/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Minus

                                                                           
Query: 129     gccatggacaagccgtgcacgctgctagtccacttcgacaagggctccgccgccatggcg 188
               |||||||| ||||| ||||| || || ||||||||||||||||||||| || ||||||| 
Sbjct: 3662454 gccatggagaagccatgcaccctcctggtccacttcgacaagggctccccctccatggcc 3662395

                                                                           
Query: 189     aatgagatcaaggcggatctggagggcagcgacgtcgccgccaaggccgaggccatgaag 248
               || ||||||||||| || || ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 3662394 aacgagatcaaggccgacctcgagggcagcgacgtcgccgccaaggtcgacgccatgaag 3662335

                                                                           
Query: 249     cgcgccgtcatgctcctcctcaatggcgagaccctgccgacgctcttcatcaccgtcgtc 308
               |||||| ||||||| |||||||| ||||||||||| ||    ||||||||||||||||||
Sbjct: 3662334 cgcgccatcatgctgctcctcaacggcgagaccctcccccacctcttcatcaccgtcgtc 3662275

                                                                           
Query: 309     cgctacgtcctcccctccgaggaccacaccatccagaagttgttgctcctctacctcgag 368
               ||||||||||||||||||||||||||||||||||||||| |  | |||||||||||||||
Sbjct: 3662274 cgctacgtcctcccctccgaggaccacaccatccagaagctcctcctcctctacctcgag 3662215

                                                                          
Query: 369     atcgttgacaagcgcgatgccgctggccgc---gtcctcccggagatgatcctcatctg 424
               ||||| ||||||||||| | |||   | ||   || |||||||||||||||||||||||
Sbjct: 3662214 atcgtcgacaagcgcgacgtcgcctccggcaaggtactcccggagatgatcctcatctg 3662156



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>ref|XM_956946.1| Neurospora crassa OR74A hypothetical protein (NCU08828.1) partial
            mRNA
          Length = 2685

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 163  tcgacaagggctccgccgccat 184
            ||||||||||||||||||||||
Sbjct: 2162 tcgacaagggctccgccgccat 2183



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>ref|XM_330944.1| Neurospora crassa OR74A hypothetical protein (NCU08828.1) partial
            mRNA
          Length = 2685

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 163  tcgacaagggctccgccgccat 184
            ||||||||||||||||||||||
Sbjct: 2162 tcgacaagggctccgccgccat 2183



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>emb|X80052.1|NCFOX2 N.crassa fox-2 gene
          Length = 3401

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 163  tcgacaagggctccgccgccat 184
            ||||||||||||||||||||||
Sbjct: 2665 tcgacaagggctccgccgccat 2686



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>gb|AE005990.1| Caulobacter crescentus CB15 section 316 of 359 of the complete
           genome
          Length = 10324

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 202 cggatctggagggcagcgacgtcgccgcc 230
           |||||||| ||||| ||||||||||||||
Sbjct: 542 cggatctgcagggcggcgacgtcgccgcc 514



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 207 ctggagggcagcgacgtcgccgcc 230
           ||||||||| ||||||||||||||
Sbjct: 508 ctggagggcggcgacgtcgccgcc 531



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     tcgccgccaaggccgaggcca 243
               |||||||||||||||||||||
Sbjct: 1602246 tcgccgccaaggccgaggcca 1602226



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 263     cctcctcaatggcgagaccctgccg 287
               |||||||||||||||||| ||||||
Sbjct: 7448022 cctcctcaatggcgagactctgccg 7448046



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 223     tcgccgccaaggccgaggcc 242
               ||||||||||||||||||||
Sbjct: 1428782 tcgccgccaaggccgaggcc 1428801



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>gb|BC072525.1| Rattus norvegicus paralemmin, mRNA (cDNA clone MGC:91516
           IMAGE:7097177), complete cds
          Length = 2635

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 aggaccacaccatccagaag 347
           ||||||||||||||||||||
Sbjct: 886 aggaccacaccatccagaag 905



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>gb|AF457546.1| Anopheles gambiae 30 kDa protein mRNA, complete cds
          Length = 945

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 atcgttgacaagcgcgatgc 388
           ||||||||||||||||||||
Sbjct: 815 atcgttgacaagcgcgatgc 834



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>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13
          Length = 348264

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   tcgccgccaaggccgaggcc 242
             ||||||||||||||||||||
Sbjct: 46253 tcgccgccaaggccgaggcc 46272



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>emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 5/14
          Length = 299450

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    tcgccgccaaggccgaggcc 242
              ||||||||||||||||||||
Sbjct: 112842 tcgccgccaaggccgaggcc 112861



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>ref|NM_130829.1| Rattus norvegicus paralemmin (Palm), mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 aggaccacaccatccagaag 347
           ||||||||||||||||||||
Sbjct: 845 aggaccacaccatccagaag 864



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     cgccgtcgccctccggcgcg 109
              ||||||||||||||||||||
Sbjct: 612231 cgccgtcgccctccggcgcg 612250



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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     tcctcaatggcgagaccctg 284
               ||||||||||||||||||||
Sbjct: 4156014 tcctcaatggcgagaccctg 4156033



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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     gatcaaggcggatctggagg 213
               ||||||||||||||||||||
Sbjct: 1763887 gatcaaggcggatctggagg 1763868



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     gacgtcgccgccaaggccga 238
               ||||||||||||||||||||
Sbjct: 1034632 gacgtcgccgccaaggccga 1034613



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>gb|AC131405.5| Rattus norvegicus  BAC CH230-179I7 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 217197

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    aggaccacaccatccagaag 347
              ||||||||||||||||||||
Sbjct: 142948 aggaccacaccatccagaag 142929



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>ref|XM_553867.1| Anopheles gambiae str. PEST ENSANGP00000028522
           (ENSANGG00000019855), mRNA
          Length = 893

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 369 atcgttgacaagcgcgatgc 388
           ||||||||||||||||||||
Sbjct: 797 atcgttgacaagcgcgatgc 816



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>gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1) mRNA, complete
           cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 302 cgtcgtccgctacgtcctcc 321
           ||||||||||||||||||||
Sbjct: 265 cgtcgtccgctacgtcctcc 284



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>gb|AY103647.1| Zea mays PCO142084 mRNA sequence
          Length = 2598

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 386  tgccgctggccgcgtcctcc 405
            ||||||||||||||||||||
Sbjct: 1826 tgccgctggccgcgtcctcc 1807



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     tcgccgccaaggccgaggcc 242
               ||||||||||||||||||||
Sbjct: 2749182 tcgccgccaaggccgaggcc 2749163



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>dbj|AB058889.1| Rattus norvegicus mRNA for paralemmin, complete cds
          Length = 2571

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 aggaccacaccatccagaag 347
           ||||||||||||||||||||
Sbjct: 845 aggaccacaccatccagaag 864


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,349,630
Number of Sequences: 3902068
Number of extensions: 2349630
Number of successful extensions: 48648
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47927
Number of HSP's gapped (non-prelim): 713
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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