>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)|
          Length = 915

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 15/31 (48%), Positives = 23/31 (74%)
 Frame = +3

Query: 357 GFGYRLVSLVQRPNGGGLVGLLQVKRRSSTF 449
           G GYRLVS+ + P+ GG +G LQVK+++  +
Sbjct: 32  GKGYRLVSIEESPD-GGFIGYLQVKQKNKIY 61

>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -2

Query: 450 RRWRSGASPGGGLRGRRRWVAGRGTPAGTRTR 355
           RR + G+S G G RGR R   GRG+  G+R R
Sbjct: 228 RRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGR 259

>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -2

Query: 450 RRWRSGASPGGGLRGRRRWVAGRGTPAGTRTR 355
           RR + G+S G G RGR R   GRG+  G+R R
Sbjct: 228 RRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGR 259

>FUT4_PANTR (Q659K9) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside|
           3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV)
           (Fuc-TIV)
          Length = 405

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/67 (35%), Positives = 25/67 (37%), Gaps = 14/67 (20%)
 Frame = -2

Query: 429 SPGGGLRGRRRWVAGRGTP--------AGTR-----TRPAWVPL-PAPWPCDWPSRLRRR 292
           SP     GRRRW  GRG P        AG       T   W  L P PW    PSR    
Sbjct: 7   SPTAAAGGRRRWRRGRGLPWTVCVLAAAGLTCTALITYACWGQLPPLPWASPTPSRPVGV 66

Query: 291 HCWCRPW 271
             W  P+
Sbjct: 67  LLWWEPF 73

>CYCG_RHOS4 (Q53143) Diheme cytochrome c-type|
          Length = 296

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 423 GGGLRGRRRWVAGRGTPAGTRTRPAWVPLPAPW 325
           G GLR + RW+AG   P G  T P   P    W
Sbjct: 211 GLGLRDKSRWLAGGPNPEGRGTIPNITPAKLDW 243

>PO5F1_BOVIN (O97552) POU domain, class 5, transcription factor 1|
           (Octamer-binding transcription factor 3) (Oct-3) (Oct-4)
          Length = 360

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
 Frame = -2

Query: 435 GASPGG---GLRGRRRWVAGRGTPAGTRTRPAWVPLPAPW---PCDWPSRLRRRHCWCRP 274
           G  PGG   G    R W++ +G P G+   P  VP    W   PC  P  L     +C P
Sbjct: 19  GDGPGGPEPGWVDPRTWMSFQGPPGGSGIGPGVVPGAEVWGLPPCPPPYDLCGGMAYCAP 78

>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor|
            protein 550) (AKAP 550) (dAKAP550)
          Length = 3584

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = -2

Query: 435  GASPGGGLRGRRRWVAGRGTPAGTRTRPAWVPLPAP-----WPCDWPSR 304
            GA  GGG+   +    G+G P+  R RP  +P+ AP      P   PSR
Sbjct: 2458 GAGSGGGVNSGQ----GQGVPSNQRPRPEELPMKAPALVAQLPLTTPSR 2502

>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor|
          Length = 544

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -2

Query: 444 WRSGASPGGGLRGRRRWVAGRGTPAGTRTRPAWVPLPAPWP 322
           W +    G G  GR RW  GRG        P  +P P P+P
Sbjct: 142 WSNDNHGGRGGMGRGRWSNGRG-------GPGLLPRPGPYP 175

>XLNR_ASPNG (O42804) Transcriptional activator xlnR|
          Length = 875

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 354 PAWVPLPAPWPCDWPS 307
           P W+PLP+P P ++PS
Sbjct: 268 PGWLPLPSPSPANFPS 283


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,331,440
Number of Sequences: 219361
Number of extensions: 614785
Number of successful extensions: 2362
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2357
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)