ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9 29 5.2

>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9|
          Length = 378

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 282 KHPPPQNRPQGAQQPRTSDSXXXXXXXAESTRETK 178
           KH  PQ +PQ   QP  S S       ++ST+  K
Sbjct: 123 KHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRK 157


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,544,087
Number of Sequences: 219361
Number of extensions: 509964
Number of successful extensions: 1616
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top