ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481558.1| Oryza sativa (japonica cultivar-group), mRNA 339 4e-90
2dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 4e-90
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 311 9e-82
4dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic D... 311 9e-82
5ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
6ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
7ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
8ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
9ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
10ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
11ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
12ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
13ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin... 44 0.31
14gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.2
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.2
16gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, c... 42 1.2
17ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle be... 40 4.9
18gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 4.9
19gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 4.9
20ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (i... 40 4.9
21ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (incl... 40 4.9
22gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome... 40 4.9
23gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosom... 40 4.9
24emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.9
25gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, co... 40 4.9
26dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 4.9
27dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B... 40 4.9
28gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194... 40 4.9
29gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 4.9
30emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-4... 40 4.9
31gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 4.9
32emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 4.9
33dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocyt... 40 4.9
34emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2... 40 4.9
35gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds 40 4.9
36gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec... 40 4.9 
>ref|XM_481558.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  339 bits (171), Expect = 4e-90
 Identities = 216/231 (93%)
 Strand = Plus / Plus

                                                                       
Query: 138 gcatcttcgacggcctcccaattccgccagacaaatcttacctgaaggaagggctgtcgc 197
           ||||||||||||||||||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 26  gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 85

                                                                       
Query: 198 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 257
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 86  ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 145

                                                                       
Query: 258 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 317
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 205

                                                              
Query: 318 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaagg 368
           |||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaagg 256
to top
>dbj|AK070862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E23, full
           insert sequence
          Length = 3546

 Score =  339 bits (171), Expect = 4e-90
 Identities = 216/231 (93%)
 Strand = Plus / Plus

                                                                       
Query: 138 gcatcttcgacggcctcccaattccgccagacaaatcttacctgaaggaagggctgtcgc 197
           ||||||||||||||||||| || ||  | |||||||| ||||| ||||||||||| ||||
Sbjct: 111 gcatcttcgacggcctccccatcccagccgacaaatcctacctcaaggaagggctctcgc 170

                                                                       
Query: 198 ggatcgacgagggatgggcagcggcgcggttcgactcgctgccgcacgtcgtgcacatcc 257
           |||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 171 ggattgacgaggggtgggcggcggcgcgcttcgactcgctgccgcacgtcgtgcacatcc 230

                                                                       
Query: 258 tcacctccaaggaccgcgatggcgagatccagttcctcaaggagcagagcgacctcatcg 317
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tcacctccaaggaccgcgagggcgagatccagttcctcaaggagcagagcgacctcatcg 290

                                                              
Query: 318 aggacgtcgttgacgaggtcgtccacgcgtaccaccatggcttcaacaagg 368
           |||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 291 aggacgtcgtcgacgaggtcgtccacgcctaccaccatggcttcaacaagg 341
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  311 bits (157), Expect = 9e-82
 Identities = 184/193 (95%)
 Strand = Plus / Minus

                                                                            
Query: 176      tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 235
                ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 13758055 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 13757996

                                                                            
Query: 236      ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 295
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 13757995 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 13757936

                                                                            
Query: 296      aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 355
                |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 13757935 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 13757876

                             
Query: 356      ggcttcaacaagg 368
                |||||||||||||
Sbjct: 13757875 ggcttcaacaagg 13757863
to top
>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0406D01
          Length = 163932

 Score =  311 bits (157), Expect = 9e-82
 Identities = 184/193 (95%)
 Strand = Plus / Minus

                                                                         
Query: 176   tacctgaaggaagggctgtcgcggatcgacgagggatgggcagcggcgcggttcgactcg 235
             ||||| ||||||||||| |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 72124 tacctcaaggaagggctctcgcggattgacgaggggtgggcggcggcgcgcttcgactcg 72065

                                                                         
Query: 236   ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgatggcgagatccagttcctc 295
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 72064 ctgccgcacgtcgtgcacatcctcacctccaaggaccgcgagggcgagatccagttcctc 72005

                                                                         
Query: 296   aaggagcagagcgacctcatcgaggacgtcgttgacgaggtcgtccacgcgtaccaccat 355
             |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 72004 aaggagcagagcgacctcatcgaggacgtcgtcgacgaggtcgtccacgcctaccaccat 71945

                          
Query: 356   ggcttcaacaagg 368
             |||||||||||||
Sbjct: 71944 ggcttcaacaagg 71932
to top
>ref|XM_847737.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 3 (LOC490734), mRNA
          Length = 7482

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_547856.2| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 1 (LOC490734), mRNA
          Length = 6473

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861283.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 10 (LOC490734), mRNA
          Length = 7497

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861267.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 9 (LOC490734), mRNA
          Length = 7587

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861254.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 8 (LOC490734), mRNA
          Length = 7488

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861243.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 7 (LOC490734), mRNA
          Length = 7494

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861231.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 6 (LOC490734), mRNA
          Length = 7434

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>ref|XM_861213.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 5 (LOC490734), mRNA
          Length = 7692

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 430 tccagttcctcaaggagcagag 451
to top
>ref|XM_861197.1| PREDICTED: Canis familiaris similar to spectrin beta isoform a,
           transcript variant 4 (LOC490734), mRNA
          Length = 3721

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 285 tccagttcctcaaggagcagag 306
           ||||||||||||||||||||||
Sbjct: 415 tccagttcctcaaggagcagag 436
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 316     cgaggacgtcgttgacgaggtcgtc 340
               |||||||||||| ||||||||||||
Sbjct: 4874049 cgaggacgtcgtggacgaggtcgtc 4874025
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 295     caaggagcagagcgacctcatcgaggacg 323
               |||||||||| ||| ||||||||||||||
Sbjct: 1077901 caaggagcagcgcgccctcatcgaggacg 1077929
to top
>gb|AF108008.1|AF108008 Hordeum vulgare HV1LRR1 (HV1LRR1) gene, complete cds
          Length = 5163

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 314 atcgaggacgtcgttgacgag 334
           |||||||||||||||||||||
Sbjct: 511 atcgaggacgtcgttgacgag 531
to top
>ref|XM_510006.1| PREDICTED: Pan troglodytes similar to muscle beta spectrin
           (LOC452970), mRNA
          Length = 7365

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 494 tccagttcctcaaggagcag 513
to top
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 257     ctcacctccaaggaccgcgatggc 280
               |||||||||| |||||||||||||
Sbjct: 2008732 ctcacctccatggaccgcgatggc 2008755
to top
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 296     aaggagcagagcgacctcatcgag 319
               |||||||||||||||| |||||||
Sbjct: 1104154 aaggagcagagcgaccgcatcgag 1104177
to top
>ref|NM_001024858.1| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 1, mRNA
          Length = 10064

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
to top
>ref|NM_000347.4| Homo sapiens spectrin, beta, erythrocytic (includes spherocytosis,
           clinical type I) (SPTB), transcript variant 2, mRNA
          Length = 6695

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 413 tccagttcctcaaggagcag 432
to top
>gb|AC127367.4| Mus musculus BAC clone RP23-19G15 from chromosome 9, complete sequence
          Length = 176541

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    agacaaatcttacctgaaggaagg 189
              ||||| ||||||||||||||||||
Sbjct: 172864 agacacatcttacctgaaggaagg 172841
to top
>gb|AC123815.3| Mus musculus BAC clone RP24-238O19 from chromosome 9, complete sequence
          Length = 136592

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   agacaaatcttacctgaaggaagg 189
             ||||| ||||||||||||||||||
Sbjct: 63560 agacacatcttacctgaaggaagg 63537
to top
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    cgtcgttgacgaggtcgtcc 341
              ||||||||||||||||||||
Sbjct: 232835 cgtcgttgacgaggtcgtcc 232816
to top
>gb|AC105101.8| Homo sapiens chromosome 18, clone RP11-246E12, complete sequence
          Length = 172626

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tccagttcctcaaggagcag 304
              ||||||||||||||||||||
Sbjct: 108238 tccagttcctcaaggagcag 108257
to top
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     taccaccatggcttcaacaa 366
               ||||||||||||||||||||
Sbjct: 3021626 taccaccatggcttcaacaa 3021607
to top
>dbj|AB243008.1| Nocardia sp. Hou_blue gyrB gene for DNA gyrase B, partial cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 317 gaggacgtcgttgacgaggtcgtc 340
           ||||||||||| ||||||||||||
Sbjct: 316 gaggacgtcgtcgacgaggtcgtc 339
to top
>gb|AE009637.1| Brucella melitensis 16M chromosome I, section 194 of 195 of the
           complete sequence
          Length = 10552

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ctcacctccaaggaccgcgatggc 280
           |||||||||| |||||||||||||
Sbjct: 351 ctcacctccatggaccgcgatggc 328
to top
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 257     ctcacctccaaggaccgcgatggc 280
               |||||||||| |||||||||||||
Sbjct: 2025391 ctcacctccatggaccgcgatggc 2025414
to top
>emb|AL121774.5|CNS01DSF Human chromosome 14 DNA sequence BAC R-430G13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 171030

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   tccagttcctcaaggagcag 304
             ||||||||||||||||||||
Sbjct: 30244 tccagttcctcaaggagcag 30263
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 299   gagcagagcgacctcatcgaggacgtcg 326
             |||||||||| | |||||||||||||||
Sbjct: 62180 gagcagagcggcttcatcgaggacgtcg 62153
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 257     ctcacctccaaggaccgcgatggc 280
               |||||||||| |||||||||||||
Sbjct: 2022510 ctcacctccatggaccgcgatggc 2022533
to top
>dbj|AB209415.1| Homo sapiens mRNA for spectrin, beta, erythrocytic (includes
           spherocytosis, clinical type I) variant protein
          Length = 7481

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 502 tccagttcctcaaggagcag 521
to top
>emb|AL135745.5|CNS01DVD Human chromosome 14 DNA sequence BAC C-2300N4 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 118332

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tccagttcctcaaggagcag 304
              ||||||||||||||||||||
Sbjct: 114819 tccagttcctcaaggagcag 114838
to top
>gb|J05500.1|HUMSPTB Human beta-spectrin (SPTB) mRNA, complete cds
          Length = 6765

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 454 tccagttcctcaaggagcag 473
to top
>gb|U00910.1|HSU00910 Human beta-spectrin (HSPTB1) gene, Humbspec.4 exon sequence
          Length = 348

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 tccagttcctcaaggagcag 304
           ||||||||||||||||||||
Sbjct: 125 tccagttcctcaaggagcag 144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,445,980
Number of Sequences: 3902068
Number of extensions: 2445980
Number of successful extensions: 37641
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37288
Number of HSP's gapped (non-prelim): 353
length of query: 368
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 346
effective length of database: 17,147,199,772
effective search space: 5932931121112
effective search space used: 5932931121112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top