ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
2ref|NM_191169.1| Oryza sativa (japonica cultivar-group), predic... 165 2e-37
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
4dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
5dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
6gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, comple... 46 0.10
7gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 44 0.40
8gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 42 1.6
9emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete ch... 42 1.6
10gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete se... 42 1.6
11dbj|AK080389.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.6
12gb|AC130404.8| Homo sapiens 12 BAC RP11-337L12 (Roswell Park Can... 42 1.6
13gb|AC139767.5| Homo sapiens 12 BAC RP11-572N16 (Roswell Park Can... 42 1.6
14gb|BC050848.1| Mus musculus claspin homolog (Xenopus laevis), mR... 42 1.6
15emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chr... 42 1.6
16ref|NM_175554.3| Mus musculus claspin homolog (Xenopus laevis) (... 42 1.6
17emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chr... 42 1.6
18gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.2
19gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome... 40 6.2
20gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Can... 40 6.2
21gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complet... 40 6.2
22gb|AC113318.8| Mus musculus chromosome 3, clone RP23-442I7, comp... 40 6.2
23emb|AL031682.4|HS873P14 Human DNA sequence from clone RP5-873P14... 40 6.2
24gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.2
25emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 m... 40 6.2
26gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, co... 40 6.2
27dbj|AB001523.1| Homo sapiens gene for TMEM1 and PWP2,complete an... 40 6.2
28dbj|AK141685.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 6.2
29gb|AC092440.5| Homo sapiens BAC clone RP11-453O5 from 4, complet... 40 6.2
30emb|AL845159.4| Mouse DNA sequence from clone RP23-263O22 on chr... 40 6.2
31gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 6.2
32gb|AC129887.3| Atelerix albiventris clone LB4-416G11, complete s... 40 6.2
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
34gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complet... 40 6.2
35dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
36dbj|AP001753.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.2
37gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 6.2
38gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10,... 40 6.2
39emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 6.2
40emb|AL670292.9| Mouse DNA sequence from clone RP23-231H22 on chr... 40 6.2
41dbj|AP001054.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.2 
>dbj|AK101026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150E15, full
           insert sequence
          Length = 3313

 Score =  170 bits (86), Expect = 3e-39
 Identities = 229/274 (83%), Gaps = 2/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 189 cccggatcgaccggcattccg-gccccgtgcacgctccagccctggt-ggtgaggcatgg 246
           ||||||||| ||||||||||  |||||| || |||||| |||| ||  ||||||||||||
Sbjct: 153 cccggatcggccggcattccccgccccgcgcgcgctccggccccgggcggtgaggcatgg 212

                                                                       
Query: 247 ggaccttcggtggccagttcgaggacttccatgcggacgaccggcgtgcggaggtgatag 306
           ||||  |    ||| ||| |||||||||| |||||| | | |||||||||||||||||||
Sbjct: 213 ggacggtgaacggcgagtacgaggacttcgatgcggccaatcggcgtgcggaggtgatag 272

                                                                       
Query: 307 attggctgggcgggctgctgccggagttcgatttaccgctggattcttcagacgaggagc 366
           ||||||| |||||| | ||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 273 attggctcggcgggttactgccggagttcgatttgccgttggattcttcggacgaggagc 332

                                                                       
Query: 367 tgcgggagtaccttatcgacggaacggcgctgtgctacactgcggacaagctcatgcctg 426
           ||||||| ||||| ||  |||||   ||||| |||||   |||||||||||||||||| |
Sbjct: 333 tgcgggattacctcattaacggagaagcgctatgctatgttgcggacaagctcatgcccg 392

                                             
Query: 427 gtgttcttgagggtgtctggggtggctatgcatc 460
           ||||||| |||||    |||||||| ||||||||
Sbjct: 393 gtgttctggaggggacgtggggtggttatgcatc 426
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>ref|NM_191169.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2433

 Score =  165 bits (83), Expect = 2e-37
 Identities = 167/195 (85%)
 Strand = Plus / Plus

                                                                       
Query: 266 cgaggacttccatgcggacgaccggcgtgcggaggtgatagattggctgggcgggctgct 325
           |||||||||| |||||| | | |||||||||||||||||||||||||| |||||| | ||
Sbjct: 24  cgaggacttcgatgcggccaatcggcgtgcggaggtgatagattggctcggcgggttact 83

                                                                       
Query: 326 gccggagttcgatttaccgctggattcttcagacgaggagctgcgggagtaccttatcga 385
           ||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||| ||  |
Sbjct: 84  gccggagttcgatttgccgttggattcttcggacgaggagctgcgggattacctcattaa 143

                                                                       
Query: 386 cggaacggcgctgtgctacactgcggacaagctcatgcctggtgttcttgagggtgtctg 445
           ||||   ||||| |||||   |||||||||||||||||| |||||||| |||||    ||
Sbjct: 144 cggagaagcgctatgctatgttgcggacaagctcatgcccggtgttctggaggggacgtg 203

                          
Query: 446 gggtggctatgcatc 460
           |||||| ||||||||
Sbjct: 204 gggtggttatgcatc 218
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  149 bits (75), Expect = 9e-33
 Identities = 132/151 (87%)
 Strand = Plus / Plus

                                                                            
Query: 288      cggcgtgcggaggtgatagattggctgggcgggctgctgccggagttcgatttaccgctg 347
                |||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||| ||
Sbjct: 31093354 cggcgtgcggaggtgatagattggctcggcgggttactgccggagttcgatttgccgttg 31093413

                                                                            
Query: 348      gattcttcagacgaggagctgcgggagtaccttatcgacggaacggcgctgtgctacact 407
                |||||||| ||||||||||||||||| ||||| ||  |||||   ||||| |||||   |
Sbjct: 31093414 gattcttcggacgaggagctgcgggattacctcattaacggagaagcgctatgctatgtt 31093473

                                               
Query: 408      gcggacaagctcatgcctggtgttcttgagg 438
                ||||||||||||||||| |||||||| ||||
Sbjct: 31093474 gcggacaagctcatgcccggtgttctggagg 31093504



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 55/64 (85%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                            
Query: 189      cccggatcgaccggcattccg-gccccgtgcacgctccagccctggt-ggtgaggcatgg 246
                ||||||||| ||||||||||  |||||| || |||||| |||| ||  ||||||||||||
Sbjct: 31092821 cccggatcggccggcattccccgccccgcgcgcgctccggccccgggcggtgaggcatgg 31092880

                    
Query: 247      ggac 250
                ||||
Sbjct: 31092881 ggac 31092884
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E07
          Length = 176486

 Score =  149 bits (75), Expect = 9e-33
 Identities = 132/151 (87%)
 Strand = Plus / Plus

                                                                          
Query: 288    cggcgtgcggaggtgatagattggctgggcgggctgctgccggagttcgatttaccgctg 347
              |||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||| ||
Sbjct: 150333 cggcgtgcggaggtgatagattggctcggcgggttactgccggagttcgatttgccgttg 150392

                                                                          
Query: 348    gattcttcagacgaggagctgcgggagtaccttatcgacggaacggcgctgtgctacact 407
              |||||||| ||||||||||||||||| ||||| ||  |||||   ||||| |||||   |
Sbjct: 150393 gattcttcggacgaggagctgcgggattacctcattaacggagaagcgctatgctatgtt 150452

                                             
Query: 408    gcggacaagctcatgcctggtgttcttgagg 438
              ||||||||||||||||| |||||||| ||||
Sbjct: 150453 gcggacaagctcatgcccggtgttctggagg 150483



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 55/64 (85%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                          
Query: 189    cccggatcgaccggcattccg-gccccgtgcacgctccagccctggt-ggtgaggcatgg 246
              ||||||||| ||||||||||  |||||| || |||||| |||| ||  ||||||||||||
Sbjct: 149800 cccggatcggccggcattccccgccccgcgcgcgctccggccccgggcggtgaggcatgg 149859

                  
Query: 247    ggac 250
              ||||
Sbjct: 149860 ggac 149863
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>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0014K08
          Length = 177263

 Score =  149 bits (75), Expect = 9e-33
 Identities = 132/151 (87%)
 Strand = Plus / Plus

                                                                         
Query: 288   cggcgtgcggaggtgatagattggctgggcgggctgctgccggagttcgatttaccgctg 347
             |||||||||||||||||||||||||| |||||| | ||||||||||||||||| ||| ||
Sbjct: 19699 cggcgtgcggaggtgatagattggctcggcgggttactgccggagttcgatttgccgttg 19758

                                                                         
Query: 348   gattcttcagacgaggagctgcgggagtaccttatcgacggaacggcgctgtgctacact 407
             |||||||| ||||||||||||||||| ||||| ||  |||||   ||||| |||||   |
Sbjct: 19759 gattcttcggacgaggagctgcgggattacctcattaacggagaagcgctatgctatgtt 19818

                                            
Query: 408   gcggacaagctcatgcctggtgttcttgagg 438
             ||||||||||||||||| |||||||| ||||
Sbjct: 19819 gcggacaagctcatgcccggtgttctggagg 19849



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 55/64 (85%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                         
Query: 189   cccggatcgaccggcattccg-gccccgtgcacgctccagccctggt-ggtgaggcatgg 246
             ||||||||| ||||||||||  |||||| || |||||| |||| ||  ||||||||||||
Sbjct: 19166 cccggatcggccggcattccccgccccgcgcgcgctccggccccgggcggtgaggcatgg 19225

                 
Query: 247   ggac 250
             ||||
Sbjct: 19226 ggac 19229
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>gb|AC069288.7| Homo sapiens BAC clone RP11-416J17 from 7, complete sequence
          Length = 145709

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 208   cggccccgtgcacgctccagccctggtggtgaggc 242
             |||||| | ||||||| ||||||||||||||||||
Sbjct: 85079 cggccctgggcacgctgcagccctggtggtgaggc 85045
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 163   atccggcgcctgccccgccgga 184
             ||||||||||||||||||||||
Sbjct: 89659 atccggcgcctgccccgccgga 89638
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>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 344    gctggattcttcagacgaggagctg 368
              ||||||||||||||| |||||||||
Sbjct: 130935 gctggattcttcagaggaggagctg 130911
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>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12
          Length = 306250

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    cccggatcgaccggcattccg 209
              |||||||||||||||||||||
Sbjct: 113516 cccggatcgaccggcattccg 113536
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>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
          Length = 106753

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aagaaaaagaacaaaagagag 21
             |||||||||||||||||||||
Sbjct: 64366 aagaaaaagaacaaaagagag 64386
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>dbj|AK080389.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630089O11 product:unclassifiable, full
           insert sequence
          Length = 1383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 344 gctggattcttcagacgaggagctg 368
           ||||||||||||||| |||||||||
Sbjct: 217 gctggattcttcagaggaggagctg 241
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>gb|AC130404.8| Homo sapiens 12 BAC RP11-337L12 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 135653

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 88  gaaaacccaaaccaaaagcccccag 112
           ||||||||||||||||||| |||||
Sbjct: 233 gaaaacccaaaccaaaagcacccag 257
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>gb|AC139767.5| Homo sapiens 12 BAC RP11-572N16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 11901

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 88   gaaaacccaaaccaaaagcccccag 112
            ||||||||||||||||||| |||||
Sbjct: 1772 gaaaacccaaaccaaaagcacccag 1748
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>gb|BC050848.1| Mus musculus claspin homolog (Xenopus laevis), mRNA (cDNA clone
            MGC:59414 IMAGE:6507692), complete cds
          Length = 4964

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   aaaacccaaaccaaaagcccc 109
            |||||||||||||||||||||
Sbjct: 4801 aaaacccaaaccaaaagcccc 4781
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>emb|AL928956.11| Mouse DNA sequence from clone RP23-74G16 on chromosome 2, complete
             sequence
          Length = 174347

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     aagaaaaagaacaaaagagag 21
             |||||||||||||||||||||
Sbjct: 82994 aagaaaaagaacaaaagagag 83014
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>ref|NM_175554.3| Mus musculus claspin homolog (Xenopus laevis) (Clspn), mRNA
          Length = 4964

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 89   aaaacccaaaccaaaagcccc 109
            |||||||||||||||||||||
Sbjct: 4801 aaaacccaaaccaaaagcccc 4781
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>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete
              sequence
          Length = 213391

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     aaaacccaaaccaaaagcccc 109
              |||||||||||||||||||||
Sbjct: 143222 aaaacccaaaccaaaagcccc 143202
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      gagaggggggagcggagcgg 84
               ||||||||||||||||||||
Sbjct: 1542023 gagaggggggagcggagcgg 1542004
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>gb|AC126459.3| Mus musculus BAC clone RP23-181A8 from chromosome 9, complete sequence
          Length = 217068

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      agaaaaagaacaaaagagag 21
              ||||||||||||||||||||
Sbjct: 128481 agaaaaagaacaaaagagag 128500
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>gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aagaaaaagaacaaaagagaggat 24
             ||||||||||||||||| ||||||
Sbjct: 50311 aagaaaaagaacaaaagtgaggat 50334
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>gb|AC122028.3| Mus musculus BAC clone RP24-394D4 from 2, complete sequence
          Length = 173301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     aagaaaacccaaaccaaaag 105
              ||||||||||||||||||||
Sbjct: 117493 aagaaaacccaaaccaaaag 117512
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>gb|AC113318.8| Mus musculus chromosome 3, clone RP23-442I7, complete sequence
          Length = 213409

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aagaaaaagaacaaaagaga 20
              ||||||||||||||||||||
Sbjct: 160114 aagaaaaagaacaaaagaga 160133
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>emb|AL031682.4|HS873P14 Human DNA sequence from clone RP5-873P14 on chromosome 20p12 Contains
             the part of the PAK7 gene for p21(CDKN1A)-activated kinase
             7, STSs and GSSs, complete sequence
          Length = 156306

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   ctcatgcctggtgttcttga 436
             ||||||||||||||||||||
Sbjct: 41845 ctcatgcctggtgttcttga 41826
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     tggccagttcgaggacttcc 276
               ||||||||||||||||||||
Sbjct: 1211247 tggccagttcgaggacttcc 1211266
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>emb|AL954245.1| Pan troglodytes chromosome 22 clone PTB-047B05 map 22q22.3, complete
             sequence
          Length = 176622

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 88    gaaaacccaaaccaaaagc-ccccagaa 114
             ||||||||||||||||||| ||||||||
Sbjct: 37059 gaaaacccaaaccaaaagctccccagaa 37086
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>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence
          Length = 203330

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 89    aaaacccaaaccaaaagcccccagaact 116
             |||||| |||||||||||||||| ||||
Sbjct: 74638 aaaaccaaaaccaaaagcccccaaaact 74611
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>dbj|AB001523.1| Homo sapiens gene for TMEM1 and PWP2,complete and partial cds
          Length = 122638

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 88   gaaaacccaaaccaaaagc-ccccagaa 114
            ||||||||||||||||||| ||||||||
Sbjct: 7747 gaaaacccaaaccaaaagctccccagaa 7774
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>dbj|AK141685.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030022G07
            product:unclassifiable, full insert sequence
          Length = 3417

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 414  aagctcatgcctggtgttct 433
            ||||||||||||||||||||
Sbjct: 1457 aagctcatgcctggtgttct 1476
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>gb|AC092440.5| Homo sapiens BAC clone RP11-453O5 from 4, complete sequence
          Length = 164781

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aagaaaaagaacaaaagagaggat 24
            |||||||||||||||| |||||||
Sbjct: 4236 aagaaaaagaacaaaatagaggat 4213
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>emb|AL845159.4| Mouse DNA sequence from clone RP23-263O22 on chromosome 2, complete
              sequence
          Length = 166493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     aagaaaacccaaaccaaaag 105
              ||||||||||||||||||||
Sbjct: 149142 aagaaaacccaaaccaaaag 149161
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aagaaaaagaacaaaagaga 20
              ||||||||||||||||||||
Sbjct: 231598 aagaaaaagaacaaaagaga 231579
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>gb|AC129887.3| Atelerix albiventris clone LB4-416G11, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aagaaaaagaacaaaagaga 20
             ||||||||||||||||||||
Sbjct: 27667 aagaaaaagaacaaaagaga 27648
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 4        aaaaagaacaaaagagagga 23
                ||||||||||||||||||||
Sbjct: 24481738 aaaaagaacaaaagagagga 24481719
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>gb|AC008276.4| Homo sapiens BAC clone RP11-297I3 from 2, complete sequence
          Length = 208477

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaaaagaacaaaagagagga 23
             ||||||||||||||||||||
Sbjct: 90069 aaaaagaacaaaagagagga 90050
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>dbj|AP003609.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0012B02
          Length = 149807

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aaaaagaacaaaagagagga 23
             ||||||||||||||||||||
Sbjct: 93211 aaaaagaacaaaagagagga 93192
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>dbj|AP001753.1| Homo sapiens genomic DNA, chromosome 21q, section 97/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                         
Query: 88    gaaaacccaaaccaaaagc-ccccagaa 114
             ||||||||||||||||||| ||||||||
Sbjct: 49282 gaaaacccaaaccaaaagctccccagaa 49309
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    tccgcctcccgcattgcttc 141
              ||||||||||||||||||||
Sbjct: 656093 tccgcctcccgcattgcttc 656074
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>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence
          Length = 107205

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   gcaagaaaacccaaaccaaa 103
            ||||||||||||||||||||
Sbjct: 6401 gcaagaaaacccaaaccaaa 6382
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
             sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   aagctcatgcctggtgttct 433
             ||||||||||||||||||||
Sbjct: 28841 aagctcatgcctggtgttct 28822
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>emb|AL670292.9| Mouse DNA sequence from clone RP23-231H22 on chromosome X, complete
              sequence
          Length = 217063

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aaaaagaacaaaagagagga 23
              ||||||||||||||||||||
Sbjct: 131352 aaaaagaacaaaagagagga 131333
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>dbj|AP001054.1| Homo sapiens genomic DNA, chromosome 21, clone:KB218C10, MX1-D21S171
              region, complete sequence
          Length = 120871

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 88     gaaaacccaaaccaaaagc-ccccagaa 114
              ||||||||||||||||||| ||||||||
Sbjct: 100596 gaaaacccaaaccaaaagctccccagaa 100623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,961,090
Number of Sequences: 3902068
Number of extensions: 3961090
Number of successful extensions: 85650
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 85389
Number of HSP's gapped (non-prelim): 260
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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