Clone Name | bastl15a09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NEU2_LOXAF (P81768) Neurophysin 2 (Neurophysin-II) (E-NP) | 28 | 7.1 | 2 | NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contain... | 28 | 7.1 | 3 | Y041_HAEI8 (Q4QPL1) UPF0247 protein NTHI0041 | 28 | 7.1 |
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>NEU2_LOXAF (P81768) Neurophysin 2 (Neurophysin-II) (E-NP)| Length = 92 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 Query: 286 KCFKPTVCFGESTTI*SGSCQRLRC 360 +CF P++C GE G+ + LRC Sbjct: 20 RCFGPSICCGEELGCFVGTAEALRC 44
>NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin| (IT); Neurophysin IT 2] Length = 148 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 Query: 286 KCFKPTVCFGESTTI*SGSCQRLRC 360 +CF P++C GE GS + LRC Sbjct: 52 RCFGPSICCGEGLGCLLGSPETLRC 76
>Y041_HAEI8 (Q4QPL1) UPF0247 protein NTHI0041| Length = 155 Score = 27.7 bits (60), Expect = 7.1 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = +3 Query: 33 IASCAHGGHGYFIRFRLEDLNW--PSKNDVLTA--NGGC*MIRFLINGPLGSS*LCKAVN 200 +A+C G G + + W P + L A N GC + LI GP G S CKA Sbjct: 61 LAAC---GKGKVVTLDIPGKPWTTPQLAEQLEAWKNDGC-DVCLLIGGPEGLSPECKAAA 116 Query: 201 FDKWYISP 224 W +SP Sbjct: 117 EQSWSLSP 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,245,126 Number of Sequences: 219361 Number of extensions: 990309 Number of successful extensions: 1878 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1878 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)