Clone Name | bastl15a09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gcatatatatagctagctgtgc 46 |||||||||||||||||||||| Sbjct: 27606824 gcatatatatagctagctgtgc 27606803
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 gcatatatatagctagctgtgc 46 |||||||||||||||||||||| Sbjct: 86493 gcatatatatagctagctgtgc 86472
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 tactacaatctgatctggaag 341 ||||||||||||||||||||| Sbjct: 3278103 tactacaatctgatctggaag 3278083
>emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on chromosome 17, complete sequence Length = 177741 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 tagctagctgtgcacatggtggtca 58 ||||||||||||||||||| ||||| Sbjct: 143764 tagctagctgtgcacatggaggtca 143788
>gb|AC151796.1| Ornithorhynchus anatinus chromosome UNK clone OABb-11A1, complete sequence Length = 130877 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aactgctaatggtggttgtt 138 |||||||||||||||||||| Sbjct: 20631 aactgctaatggtggttgtt 20612
>gb|AC147124.2| Mus musculus BAC clone RP24-163K4 from chromosome 7, complete sequence Length = 165569 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 atgaaacgagtggttgttgg 256 |||||||||||||||||||| Sbjct: 80888 atgaaacgagtggttgttgg 80869
>gb|AC142288.1| Pan troglodytes BAC clone RP43-178D12 from 7, complete sequence Length = 187294 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aatggcccattaggtagcag 178 |||||||||||||||||||| Sbjct: 59653 aatggcccattaggtagcag 59634
>emb|X70336.1|BCACPSF1 B.campestris (ACP-SF1) gene for acyl carrier protein Length = 3955 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aaatgattcggtttttgatt 158 |||||||||||||||||||| Sbjct: 120 aaatgattcggtttttgatt 101
>gb|AC018356.26| Homo sapiens 3 BAC RP11-258G22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 120846 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 aatggcccattaggtagcag 178 |||||||||||||||||||| Sbjct: 88727 aatggcccattaggtagcag 88708
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tctcaccccatgtgtaactg 236 |||||||||||||||||||| Sbjct: 16260 tctcaccccatgtgtaactg 16279
>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence Length = 175641 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 aattttgataagtggtatat 217 |||||||||||||||||||| Sbjct: 130767 aattttgataagtggtatat 130786
>gb|AC005685.1|AC005685 Homo sapiens clone UWGC:g1397a149 from 7p14-15, complete sequence Length = 42648 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aatggcccattaggtagcag 178 |||||||||||||||||||| Sbjct: 11284 aatggcccattaggtagcag 11303
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tctcaccccatgtgtaactg 236 |||||||||||||||||||| Sbjct: 45433 tctcaccccatgtgtaactg 45414 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,995,404 Number of Sequences: 3902068 Number of extensions: 2995404 Number of successful extensions: 56422 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56366 Number of HSP's gapped (non-prelim): 56 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)