ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl15a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RNF41_XENLA (Q5FWL3) RING finger protein 41 40 0.005
2RNF41_MOUSE (Q8BH75) RING finger protein 41 40 0.005
3RNF41_HUMAN (Q9H4P4) RING finger protein 41 40 0.005
4RNF41_BRARE (Q7ZW16) RING finger protein 41 39 0.008
5TRAF6_MOUSE (P70196) TNF receptor-associated factor 6 39 0.011
6RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 ... 38 0.018
7TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleuk... 37 0.023
8UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting ... 37 0.031
9UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting ... 37 0.031
10TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite mot... 37 0.031
11TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite mot... 37 0.031
12TRAF2_MOUSE (P39429) TNF receptor-associated factor 2 37 0.031
13TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor nec... 37 0.031
14UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting pr... 37 0.040
15RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 ... 37 0.040
16HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex su... 36 0.052
17YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B... 36 0.052
18TRI50_HUMAN (Q86XT4) Tripartite motif protein 50 36 0.068
19A33_PLEWA (Q02084) Zinc-binding protein A33 35 0.089
20COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co... 35 0.089
21TRI50_MOUSE (Q810I2) Tripartite motif protein 50 35 0.12
22TRI50_PIG (Q865W2) Tripartite motif protein 50 35 0.12
23TRI50_RAT (Q810I1) Tripartite motif protein 50 35 0.15
24ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (E... 35 0.15
25DPO3_STAAS (Q6G9U9) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
26DPO3_STAAR (Q6GHH1) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
27DPO3_STAAN (P63982) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
28DPO3_STAAM (P63981) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
29DPO3_STAAC (Q5HGG7) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
30DG17_DICDI (P11467) Protein DG17 34 0.20
31DPO3_STAAW (P68852) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
32DPO3_STAAU (P68851) DNA polymerase III polC-type (EC 2.7.7.7) (P... 34 0.20
33RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RA... 34 0.26
34BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ... 33 0.44
35PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12)... 33 0.44
36BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) ... 33 0.44
37PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING ... 33 0.58
38BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein h... 32 0.75
39PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING fi... 32 0.75
40DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3) 32 0.98
41DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3) 32 0.98
42RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein li... 32 0.98
43PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING ... 32 0.98
44TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger pr... 32 0.98
45TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger pr... 32 1.3
46TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulator... 32 1.3
47RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-) 32 1.3
48TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein 32 1.3
49PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (... 32 1.3
50PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12) 32 1.3
51PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12) 32 1.3
52LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor 32 1.3
53MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding pro... 31 1.7
54TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger pr... 31 1.7
55TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger pr... 31 1.7
56RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2 31 1.7
57MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding pro... 31 1.7
58BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein... 31 2.2
59BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein... 31 2.2
60BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein... 31 2.2
61BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein... 31 2.2
62BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein... 31 2.2
63TRAF5_MOUSE (P70191) TNF receptor-associated factor 5 31 2.2
64BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein... 31 2.2
65BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein... 31 2.2
66SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated ... 30 2.9
67SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.... 30 2.9
68SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven... 30 3.7
69RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RA... 30 3.7
70PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-b... 30 3.7
71TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger prot... 30 3.7
72TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein... 30 3.7
73PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-b... 30 3.7
74TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-inte... 30 3.7
75PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polyc... 30 4.9
76PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polyc... 30 4.9
77BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein... 30 4.9
78PJA1_MOUSE (O55176) Ubiquitin protein ligase Praja1 (EC 6.3.2.-) 30 4.9
79ZN313_BOVIN (Q4U5R4) Zinc finger protein 313 30 4.9
80ZN313_PIG (Q6J1I8) Zinc finger protein 313 30 4.9
81ZN313_PANTR (Q6J212) Zinc finger protein 313 30 4.9
82ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protei... 30 4.9
83PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polyc... 30 4.9
84TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 rece... 30 4.9
85RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-) 30 4.9
86RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cel... 30 4.9
87E41L1_MOUSE (Q9Z2H5) Band 4.1-like protein 1 (Neuronal protein 4... 29 6.4
88DPO3_THETN (Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 6.4
89RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD1... 29 6.4
90RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RA... 29 6.4
91TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12 29 6.4
92RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RA... 29 6.4
93Y411_BUCBP (Q89AA9) Hypothetical transport protein bbp_411 29 6.4
94FORD1_AQUAE (O67251) Ferredoxin oxidoreductase 1 subunit forD (E... 29 6.4
95DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 6.4
96PJA1_HUMAN (Q8NG27) Ubiquitin protein ligase Praja1 (EC 6.3.2.-)... 29 8.3
97RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-) 29 8.3
98TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger prot... 29 8.3
99E41L1_HUMAN (Q9H4G0) Band 4.1-like protein 1 (Neuronal protein 4... 29 8.3
100TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger pr... 29 8.3
101SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dep... 29 8.3
102RNF5_CAEEL (Q09463) RING finger protein 5 29 8.3
103DPO3_CLOPE (Q8XJR3) DNA polymerase III polC-type (EC 2.7.7.7) (P... 29 8.3
104TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger pro... 29 8.3 
>RNF41_XENLA (Q5FWL3) RING finger protein 41|
          Length = 317

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 463
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 464 KSLAETIGKVTVQC 505
           + +   + K+ + C
Sbjct: 70  RIMRNMLSKLQITC 83
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>RNF41_MOUSE (Q8BH75) RING finger protein 41|
          Length = 317

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 463
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 464 KSLAETIGKVTVQC 505
           + +   + K+ + C
Sbjct: 70  RIMRNMLSKLQIAC 83
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>RNF41_HUMAN (Q9H4P4) RING finger protein 41|
          Length = 317

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 463
           +  CP+C  ++   E +QA  C H +C  C+    +  Q CP D  +VT A  +P+    
Sbjct: 15  DLICPICSGVL--EEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHLRPV---P 69

Query: 464 KSLAETIGKVTVQC 505
           + +   + K+ + C
Sbjct: 70  RIMRNMLSKLQIAC 83
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>RNF41_BRARE (Q7ZW16) RING finger protein 41|
          Length = 318

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQA-QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSN 463
           +  CP+C  ++   E ++A  C H +C  C+    A  Q CP D  +VT A  +P+    
Sbjct: 15  DLLCPICSGVL--EEPVRAPHCEHAFCNACITQWFAQQQICPVDRTVVTLAHLRPV---P 69

Query: 464 KSLAETIGKVTVQC 505
           + +   + K+ + C
Sbjct: 70  RIMRNMLSKLQISC 83
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>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6|
          Length = 530

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
 Frame = +2

Query: 158 CWAGVAGRRFSLPASEPLLDRS**GRTMGFDNECILNIQTLPGEYFCPVCRTLIYPNEAL 337
           C A V     S  AS   L  S      G+D E       L  +Y CP+C  L+   EA+
Sbjct: 27  CSAAVKDDSVSGSASTGNLSSSFMEEIQGYDVEFD---PPLESKYECPIC--LMALREAV 81

Query: 338 QAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKVTVQC 505
           Q  C H +CK C +  +      CP D  ++ E     L   N +  E +  +TV+C
Sbjct: 82  QTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE---NQLFPDNFAKREIL-SLTVKC 134
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>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (mCOP1)
          Length = 733

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
 Frame = +2

Query: 164 AGVAGRRFSLPASE---PLLDRS**GRTMGFDNECILNIQTLPGEYFCPVCRTLIYPNEA 334
           AGV G   SL +S    PLL        +   N  + + +    ++ CP+C  +I   EA
Sbjct: 99  AGVGGSSSSLGSSSRKRPLL--------VPLCNGLLNSYEDKSNDFVCPICFDMI--EEA 148

Query: 335 LQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEAD 439
              +C H +C  C+         CP   Y+V   D
Sbjct: 149 YMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNID 183
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>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal|
           transducer) (RING finger protein 85)
          Length = 522

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 278 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTE 433
           L  +Y CP+C  L+   EA+Q  C H +CK C +  +      CP D  ++ E
Sbjct: 64  LESKYECPIC--LMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 114
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>UB7I3_HUMAN (Q9BYM8) Ubiquitin-conjugating enzyme 7-interacting protein 3|
           (Hepatitis B virus X-associated protein 4)
           (HBV-associated factor 4) (RING finger protein 54)
          Length = 500

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY--DGY 421
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    +CP+  + Y
Sbjct: 263 LVLNTEPAE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDNTY 320

Query: 422 -------------LVTEADSKPLVDSNKSLAETIGKVTVQC 505
                        L+T  D +  +D   S+AE     +  C
Sbjct: 321 SCSGKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHC 361
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>UB7I3_MOUSE (Q9WUB0) Ubiquitin-conjugating enzyme 7-interacting protein 3|
           (UbcM4-interacting protein 28)
          Length = 498

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY 412
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    ACP+
Sbjct: 261 LVLNTEPTE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPF 313
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>TRI74_HUMAN (Q86UV6) Tripartite motif protein 74 (Tripartite motif protein 50C)|
          Length = 250

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEADSKPLVDSNK 466
           CP+C  +    E+L  QC H YCK C   L+Y   T   CP    +V  + S P    N 
Sbjct: 16  CPICLEVF--KESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP----NV 69

Query: 467 SLAETI 484
           SLA  I
Sbjct: 70  SLAWVI 75
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>TRI73_HUMAN (Q86UV7) Tripartite motif protein 73 (Tripartite motif protein 50B)|
          Length = 250

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEADSKPLVDSNK 466
           CP+C  +    E+L  QC H YCK C   L+Y   T   CP    +V  + S P    N 
Sbjct: 16  CPICLEVF--KESLMLQCGHSYCKGCLVSLSYHLDTKVRCPMCWQVVDGSSSLP----NV 69

Query: 467 SLAETI 484
           SLA  I
Sbjct: 70  SLAWVI 75
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>TRAF2_MOUSE (P39429) TNF receptor-associated factor 2|
          Length = 501

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +2

Query: 278 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT----TQACPYDGYLVTEADSK 445
           L  +Y C  C+ ++      QAQC H YC  CL  + ++      AC Y+G L  E  S 
Sbjct: 28  LEAKYLCSACKNIL--RRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEG-LYEEGIS- 83

Query: 446 PLVDSNKSLAETIGKVTVQCL 508
            +++S+ +  +   +  V+ L
Sbjct: 84  -ILESSSAFPDNAARREVESL 103
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>TRAF2_HUMAN (Q12933) TNF receptor-associated factor 2 (Tumor necrosis factor|
           type 2 receptor-associated protein 3)
          Length = 501

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = +2

Query: 278 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT----TQACPYDG 418
           L  +Y C  CR ++      QAQC H YC  CLA + ++      AC ++G
Sbjct: 28  LEAKYLCSACRNVL--RRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76
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>UB7I3_RAT (Q62921) Ubiquitin-conjugating enzyme 7-interacting protein 3 (RBCC|
           protein interacting with PKC) (Protein kinase C-binding
           protein beta-15)
          Length = 498

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEA-LQAQCTHLYCKPCLAYVAATTQ----ACPY 412
           L + T P E  CPVC +++ P EA +  +C H +C+ CL      +Q    +CP+
Sbjct: 261 LVLNTEPAE--CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPF 313
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>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (hCOP1)
          Length = 731

 Score = 36.6 bits (83), Expect = 0.040
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +2

Query: 251 NECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 430
           N  I + +    ++ CP+C  +I   EA   +C H +C  C+         CP   Y+V 
Sbjct: 121 NGLINSYEDKSNDFVCPICFDMI--EEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVD 178

Query: 431 EAD 439
             D
Sbjct: 179 NID 181
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>HELC1_HUMAN (Q8N3C0) Activating signal cointegrator 1 complex subunit 3 (EC|
            3.6.1.-) (ASC-1 complex subunit p200) (Trip4 complex
            subunit p200) (Helicase, ATP binding 1)
          Length = 2202

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
 Frame = +2

Query: 263  LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ----ACPYDGYLVT 430
            ++IQ  PG+++CP   ++  P  A QA  +H   KP L +V++  Q    A     +L T
Sbjct: 1524 VHIQGFPGQHYCPRMASMNKP--AFQAIRSHSPAKPVLIFVSSRRQTRLTALELIAFLAT 1581

Query: 431  EADSKPLVDSNKSLAETI 484
            E D K  ++ ++   E I
Sbjct: 1582 EEDPKQWLNMDEREMENI 1599
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>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic|
           region
          Length = 274

 Score = 36.2 bits (82), Expect = 0.052
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 421
           +Y CP+C     P  AL   C H++C PCL  +  +++ C   G+
Sbjct: 203 DYRCPIC--FEPPETALMTLCGHVFCCPCLFQMVNSSRTCRQFGH 245
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>TRI50_HUMAN (Q86XT4) Tripartite motif protein 50|
          Length = 487

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTEADSKPLVDSNK 466
           CP+C  +    E L  QC H YCK CL  ++    A   CP     V  + S P    N 
Sbjct: 16  CPICLEVF--KEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQAVDGSSSLP----NV 69

Query: 467 SLAETI 484
           SLA  I
Sbjct: 70  SLARVI 75
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>A33_PLEWA (Q02084) Zinc-binding protein A33|
          Length = 624

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL--AYVAATTQACPYDGYLVTEADSKPLVDSNKS 469
           CP+CR+L    E +  +C H +CK C+  ++ +A+  +CP    ++TE        +N+ 
Sbjct: 162 CPLCRSLF--KEPVILECGHNFCKHCIDKSWESASAFSCPECKEVLTERK----YTTNRV 215

Query: 470 LAETIGKVTV 499
           LA  + K  V
Sbjct: 216 LANLVKKAAV 225
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>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +2

Query: 278 LPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVD 457
           L  ++ CP+C  +I   +A    C H +C  C+         CP  G+ +T ++  P   
Sbjct: 41  LDKDFLCPICMQII--KDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFL 98

Query: 458 SNKSLAET 481
            +K L +T
Sbjct: 99  LDKLLKKT 106
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>TRI50_MOUSE (Q810I2) Tripartite motif protein 50|
          Length = 483

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAA---TTQACPYDGYLVTE 433
           L +  L  +  CP+C  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   LTVPELQDQLQCPICLEVF--KEPLMLQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDC 62

Query: 434 ADSKPLVDSNKSLAETI 484
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
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>TRI50_PIG (Q865W2) Tripartite motif protein 50|
          Length = 486

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTE 433
           +++  L     CPVC  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   VSVPELEDRLQCPVCLEVF--KEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEVDS 62

Query: 434 ADSKPLVDSNKSLAETI 484
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
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>TRI50_RAT (Q810I1) Tripartite motif protein 50|
          Length = 483

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQA---CPYDGYLVTE 433
           L +  L  +  CP+C  +    E L  QC H YCK CL  ++    +   CP     V  
Sbjct: 5   LTVPELQDQLQCPICLEVF--KEPLMLQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDC 62

Query: 434 ADSKPLVDSNKSLAETI 484
           + S P    N SLA  I
Sbjct: 63  SSSPP----NVSLARVI 75
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>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein|
           0) (EP0)
          Length = 410

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLA 475
           CP+C   +   EA    C H +C  C+     T+ ACP     VT       VDS+ S  
Sbjct: 46  CPICLD-VAATEAQTLPCMHKFCLDCIQRWTLTSTACPLCNARVTSILHH--VDSDASFV 102

Query: 476 ET 481
           ET
Sbjct: 103 ET 104
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>DPO3_STAAS (Q6G9U9) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
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>DPO3_STAAR (Q6GHH1) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
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>DPO3_STAAN (P63982) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
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>DPO3_STAAM (P63981) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
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>DPO3_STAAC (Q5HGG7) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1438

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 899  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 958

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 959  KGDKVPDIDLNFS 971
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>DG17_DICDI (P11467) Protein DG17|
          Length = 458

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = +2

Query: 251 NECILNIQTLP--GEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQAC 406
           N+ + N ++L    +Y CP+C   IY  +  Q +  H  CK C      T + C
Sbjct: 10  NDILFNQESLQKKNKYTCPICFEFIYKKQIYQCKSGHHACKECWEKSLETKKEC 63
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>DPO3_STAAW (P68852) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1436

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 897  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 956

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 957  KGDKVPDIDLNFS 969
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>DPO3_STAAU (P68851) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1436

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+T  + N+        L    C+ C A +    Q  P++ +L  
Sbjct: 897  ITEVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDIPFETFLGF 956

Query: 431  EADSKPLVDSNKS 469
            + D  P +D N S
Sbjct: 957  KGDKVPDIDLNFS 969
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>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1073

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLA-YVAATTQACP 409
           C VC  L+  +E +Q+ C HL+C+ C+A Y+ +    CP
Sbjct: 310 CQVCDHLL--SEPVQSPCRHLFCRSCIAKYIYSLGPHCP 346
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>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 828

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACP 409
           CP C+T   P + +  +C HL+C+ C+  +  T Q  CP
Sbjct: 776 CPSCKTR--PKDCIMLKCYHLFCETCIKTMYDTRQRKCP 812
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>PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome|
           assembly factor 3) (PAF-3)
          Length = 359

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 421
           CP+CR     N+ + A   +++C  C+ +   + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFHYVRSHQACPITGY 344
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>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger|
           protein rfp-1)
          Length = 837

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACP 409
           CP C+T   P + +  +C HL+C+ C+  +  T Q  CP
Sbjct: 785 CPSCKTR--PKDCIMLKCYHLFCETCIKTMYDTRQRKCP 821
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>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 352

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 15/84 (17%), Positives = 36/84 (42%)
 Frame = +2

Query: 248 DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 427
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 120 EEERLINLSELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 178

Query: 428 TEADSKPLVDSNKSLAETIGKVTV 499
            +      +  ++ L + + K+ +
Sbjct: 179 HQTQPLYNIRLDRQLQDIVYKLVI 202
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>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog|
          Length = 1817

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  QC H++CK C+
Sbjct: 24  CPICLELI--KEPVSTQCDHIFCKFCM 48
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>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein|
           134)
          Length = 351

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 16/84 (19%), Positives = 36/84 (42%)
 Frame = +2

Query: 248 DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 427
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 119 EEERLINLVELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 177

Query: 428 TEADSKPLVDSNKSLAETIGKVTV 499
            +      +  ++ L + + K+ V
Sbjct: 178 HQTQPLYNIRLDRQLQDIVYKLVV 201
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>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)|
          Length = 347

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDG 418
           E  CP+C   I   + L+ +C H +C+ C+       +ACP  G
Sbjct: 161 ETTCPICLGEIQNAKTLE-KCRHSFCEGCITRALQVKKACPMCG 203
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>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDG 418
           E  CP+C   I   + L+ +C H +C+ C+       +ACP  G
Sbjct: 161 ESTCPICLGEIQNAKTLE-KCRHSFCEGCITRALQVKKACPMCG 203
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>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 378

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACP 409
           C +C+ L+  N  ++ QC H YC  C+         CP
Sbjct: 29  CYICKDLL--NAPVRTQCDHTYCSQCIREFLLRDNRCP 64
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>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein|
           134) (Mel18 and Bmi1-like RING finger)
          Length = 353

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 15/84 (17%), Positives = 36/84 (42%)
 Frame = +2

Query: 248 DNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLV 427
           + E ++N+  L     C +C+  +     +  +C H +CK C+      +  CP    +V
Sbjct: 121 EEERLINLVELTPYILCSICKGYLIDATTI-TECLHTFCKSCIVRHFYYSNRCPKCNIVV 179

Query: 428 TEADSKPLVDSNKSLAETIGKVTV 499
            +      +  ++ L + + K+ +
Sbjct: 180 HQTQPLYNIRLDRQLQDIVYKLVI 203
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>TRI49_HUMAN (Q9NS80) Tripartite motif protein 49 (RING finger protein 18)|
           (Testis-specific ring-finger protein)
          Length = 452

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 269 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC 373
           +Q   GE  CP+C    Y  + +   C H +C+PC
Sbjct: 6   LQVFQGELICPLCMN--YFIDPVTIDCGHSFCRPC 38
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>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)|
          Length = 258

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           E  CP+C+  +   EA+   C HL+C+ CL
Sbjct: 11  EGVCPICQESL--KEAVSTNCGHLFCRVCL 38
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>TRI30_MOUSE (P15533) Tripartite motif protein 30 (Down regulatory protein of|
           interleukin 2 receptor)
          Length = 496

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 269 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           ++ +  E  CP+C  L+   E + A C H +C+ C+
Sbjct: 6   LEMIKEEVTCPICLELL--KEPVSADCNHSFCRACI 39
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>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1114

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = +2

Query: 296  CPVCRT-LIYPNEALQ-AQCTHLYCKPCLAYVAATTQ------ACPYDGYLVTEAD 439
            C +C T  I P  A+   +C H +C+PCLA      Q       CPY    ++EA+
Sbjct: 858  CAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEAN 913
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>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein|
          Length = 229

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           E  CP+C+  +   EA+   C HL+C+ CL
Sbjct: 11  EGVCPICQESL--KEAVSTNCGHLFCRVCL 38
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>PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome|
           assembly factor 3) (PAF-3)
          Length = 359

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 421
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKARV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
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>PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12)|
          Length = 359

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 421
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
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>PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12)|
          Length = 359

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGY 421
           CP+CR     N+ + A   +++C  C+     + QACP  GY
Sbjct: 304 CPLCRKTRV-NDTVLATSGYVFCYRCVFNYVRSHQACPITGY 344
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>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 296  CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQAC-PYDGYLVTEA 436
            C +C    Y N  L   CT   C PC       T+AC P+ G+ + +A
Sbjct: 2003 CEICAPGFYGNALLPGNCTRCDCTPC------GTEACDPHSGHCLCKA 2044
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>MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding protein|
          Length = 1187

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPN--EALQAQCTHLYCKPCLAYVAATTQACPYDGYLV-TEADSKPLVDSNK 466
           CP+C      N  + +   C+H  CK CL  +    +ACP+D   + T+ D  P+   N 
Sbjct: 14  CPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACPFDQTAINTDIDVLPV---NF 68

Query: 467 SLAETIG 487
           +L + +G
Sbjct: 69  ALLQLVG 75
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>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)|
           (B30-RING finger protein)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 266 NIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 445
           ++ +L  E  CP+C+  +   E +   C H +C+ CL      T+ C   G  + E+ + 
Sbjct: 6   SVTSLADEVNCPICQGTL--REPVTIDCGHNFCRACL------TRYCEIPGPDLEESPTC 57

Query: 446 PL 451
           PL
Sbjct: 58  PL 59
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>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)|
           (B30-RING finger protein)
          Length = 481

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 266 NIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 445
           ++ +L  E  CP+C+  +   E +   C H +C+ CL      T+ C   G  + E+ + 
Sbjct: 6   SVTSLADEVNCPICQGTL--REPVTIDCGHNFCRACL------TRYCEIPGPDLEESPTC 57

Query: 446 PL 451
           PL
Sbjct: 58  PL 59
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>RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2|
          Length = 327

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
 Frame = -3

Query: 455 PPEAWNQLPSL---SNHHKGRLVWLLLHKPSKVCSRDVCTELAELRWGI*VSDKQGKNIH 285
           P E +  LP L   S HH         +  S + S D C E++ L   + ++D   K+I 
Sbjct: 77  PSEPYGNLPELGDSSQHHS--------YHDSSLFSSDKCEEMSNLTKEVDIADGSPKSIK 128

Query: 284 QEEFVYSEYIHYRNPLSGLTNFYPVRVLMPAERIASRPHQP 162
           +EE  + +  H RN  +  T  Y +  L   ER   + H P
Sbjct: 129 EEE--HGKKKHRRNRTTFTT--YQLHEL---ERAFEKSHYP 162
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>MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding protein (RING|
           finger protein 164)
          Length = 1191

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPN--EALQAQCTHLYCKPCLAYVAATTQACPYDGYLV-TEADSKPLVDSNK 466
           CP+C      N  + +   C+H  CK CL  +    +ACP+D   + T+ D  P+   N 
Sbjct: 14  CPICYNEFDENVHKPISLGCSHTVCKTCLNKL--HRKACPFDQTAINTDIDVLPV---NF 68

Query: 467 SLAETIG 487
           +L + +G
Sbjct: 69  ALLQLVG 75
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>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger|
           protein 53)
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog|
          Length = 1849

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>TRAF5_MOUSE (P70191) TNF receptor-associated factor 5|
          Length = 558

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
 Frame = +2

Query: 245 FDNECILNIQTLPGEYFCPVCRTLIYPNEALQAQC-------THLYCK 367
           F  +CI +++ L     CPV + +I P E  +  C        H+YCK
Sbjct: 64  FCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNCCKREVLNLHVYCK 111
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>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog|
          Length = 1812

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog|
          Length = 1878

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++CK C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCKFCM 48
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>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 1 (EC
           3.6.1.-) (SMARCA3-like protein 1)
          Length = 881

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEAD 439
           ++ CP+C  +  P   +  +C H++C+ C L  +  +   CP     +T++D
Sbjct: 632 DFDCPIC--ISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSD 681
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>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in|
           absentia homolog 1)
          Length = 305

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYD 415
           CPVC  L+YP    Q    H  C  C   V  T   C Y+
Sbjct: 57  CPVCTNLMYP-PIHQCPNGHTLCSSCKLRVQNTCPTCRYE 95
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>SINA2_ARATH (Q9M2P4) Ubiquitin ligase SINAT2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2)
          Length = 308

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYD 415
           CPVC  L+YP    Q    H  C  C   V  T   C Y+
Sbjct: 60  CPVCTNLMYP-PIHQCPNGHTLCSNCKLRVQNTCPTCRYE 98
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>RAG1_BRARE (O13033) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1057

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACP 409
           C VC  L+  ++ +Q+ C HL+C+ C + Y  A    CP
Sbjct: 296 CQVCDHLL--SDPVQSPCRHLFCRLCIIRYTHALGPNCP 332
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>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144)
          Length = 344

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/77 (22%), Positives = 31/77 (40%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADS 442
           + I  L     C +C         +  +C H +CK C+     T + CP     V +   
Sbjct: 7   IKITELNPHLMCALCGGYFIDATTI-VECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRP 65

Query: 443 KPLVDSNKSLAETIGKV 493
              + S+K+L + + K+
Sbjct: 66  LLSIRSDKTLQDIVYKL 82
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>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)|
          Length = 247

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C   +   EA+   C HL+C+ CL
Sbjct: 12  CPICLDPL--KEAVSTDCRHLFCRMCL 36
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>TRI27_HUMAN (P14373) Zinc-finger protein RFP (Ret finger protein) (Tripartite|
           motif protein 27) (RING finger protein 76)
          Length = 513

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 272 QTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAY---VAATTQACP 409
           + L  E  CPVC  L Y  E +   C H  C  CLA     A T  +CP
Sbjct: 8   ECLQQETTCPVC--LQYFAEPMMLDCGHNICCACLARCWGTAETNVSCP 54
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>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144) (Zfp-144)
          Length = 342

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/77 (22%), Positives = 31/77 (40%)
 Frame = +2

Query: 263 LNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADS 442
           + I  L     C +C         +  +C H +CK C+     T + CP     V +   
Sbjct: 7   IKITELNPHLMCALCGGYFIDATTI-VECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRP 65

Query: 443 KPLVDSNKSLAETIGKV 493
              + S+K+L + + K+
Sbjct: 66  LLSIRSDKTLQDIVYKL 82
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>TRIM7_HUMAN (Q9C029) Tripartite motif protein 7 (Glycogenin-interacting|
           protein) (RING finger protein 90)
          Length = 511

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
 Frame = +2

Query: 242 GFDNECILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL---------AYVAAT 394
           G   E +     L GE  C +C  L    E +  +C H +C+ C+           V A 
Sbjct: 11  GTGAEALALAAELQGEATCSICLELF--REPVSVECGHSFCRACIGRCWERPGAGSVGAA 68

Query: 395 TQACPY 412
           T+A P+
Sbjct: 69  TRAPPF 74
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>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1) (RING finger protein 51)
          Length = 326

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +2

Query: 344 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 493
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
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>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1)
          Length = 326

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +2

Query: 344 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 493
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
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>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog|
          Length = 1863

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCL 376
           CP+C  LI   E +  +C H++C+ C+
Sbjct: 24  CPICLELI--KEPVSTKCDHIFCRFCM 48
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>PJA1_MOUSE (O55176) Ubiquitin protein ligase Praja1 (EC 6.3.2.-)|
          Length = 605

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 275 TLPGEYFCPVCRTLIYPNE-ALQAQCTHLYCKPCLAYVAATTQACP 409
           T+  E  CP+C +     E A +  C H + KPC++     +  CP
Sbjct: 524 TVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCP 569
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>ZN313_BOVIN (Q4U5R4) Zinc finger protein 313|
          Length = 230

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 284 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 27  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 55
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>ZN313_PIG (Q6J1I8) Zinc finger protein 313|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 284 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
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>ZN313_PANTR (Q6J212) Zinc finger protein 313|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 284 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
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>ZN313_HUMAN (Q9Y508) Zinc finger protein 313 (RING finger protein 114)|
          Length = 228

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 284 GEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           G + CPVC  +    + +Q  C H++C  CL
Sbjct: 25  GRFTCPVCLEVY--EKPVQVPCGHVFCSACL 53
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>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex|
           protein BMI-1)
          Length = 324

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +2

Query: 344 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETIGKV 493
           +C H +CK C+     T++ CP     V +      + S+K+L + + K+
Sbjct: 33  ECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKL 82
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>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated|
           factor 1) (CRAF1) (TRAFAMN)
          Length = 567

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/43 (25%), Positives = 26/43 (60%)
 Frame = +2

Query: 269 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATT 397
           ++T+  +Y C  CR ++   +  Q +C H +C+ C+A + +++
Sbjct: 43  VKTVEDKYKCEKCRLVLCNPK--QTECGHRFCESCMAALLSSS 83
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>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)|
          Length = 231

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACPY-DGYLVTE 433
           C VC  +++  + ++ +C H++C+ C+A      +  CPY   YL +E
Sbjct: 36  CAVCLEVLH--QPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSE 81
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>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING|
           activation protein 1) (TRAC-1)
          Length = 231

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ-ACPY-DGYLVTE 433
           C VC  +++  + ++ +C H++C+ C+A      +  CPY   YL +E
Sbjct: 36  CAVCLEVLH--QPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSE 81
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>E41L1_MOUSE (Q9Z2H5) Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)|
          Length = 879

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 261 IHSLSKPIVRPH*LLSSKGSDAGRENRLPATPAQQQDKGS 142
           I+ L + +  P+  L  +  D  RE RLP++PA    KG+
Sbjct: 511 INELKRTLKEPNSKLIHRDRDWDRERRLPSSPASPSPKGT 550
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>DPO3_THETN (Q8RA32) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1401

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEA---LQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+   +  +            YC  C   +       P++ ++  
Sbjct: 864  ITEVNPLPPHYVCPKCKHSEFVTDGSFGCGVDMPDKYCPNCGTLMKKDGFDIPFEVFMGF 923

Query: 431  EADSKPLVDSNKS 469
            E D +P +D N S
Sbjct: 924  EGDKEPDIDLNFS 936
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>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)|
           (RING finger protein 73)
          Length = 495

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 344 QCTHLYCKPCLAYVAATTQACPYDGYLVTEADSKPLVDSNKSLAETI 484
           QC+H YC  C+    +    CP     VTE D K    +N+ L E +
Sbjct: 40  QCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLK----NNRILDELV 82
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>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1045

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLVDSNKSL 472
           C VC  ++  ++ +Q  C HL+C+ C L Y+      CP   Y     D   L    KS 
Sbjct: 294 CLVCEHIL--SDPVQTSCKHLFCRICILKYIKLMGCYCPSCKYPCFPTD---LTVPVKSY 348

Query: 473 AETIGKVTVQC 505
              +  + ++C
Sbjct: 349 LNVLNALLLKC 359
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>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12|
          Length = 284

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 269 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           ++ L  E  CPVC  L+   + + A C H +C+ C+
Sbjct: 6   MKNLKEEVTCPVCLNLMV--KPVSADCGHTFCQGCI 39
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>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)|
          Length = 1041

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPC-LAYVAATTQACPYDGYLVTEADSKPLVDSNKSL 472
           C +C  ++   + ++  C HL+C+ C L+ +      CP   Y     D   LV   KS 
Sbjct: 289 CQICEHILA--DPVETTCRHLFCRTCILSCIRVMGCYCPSCWYPCFPTD---LVTPVKSF 343

Query: 473 AETIGKVTVQC 505
              +  ++++C
Sbjct: 344 LNILDSLSIRC 354
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>Y411_BUCBP (Q89AA9) Hypothetical transport protein bbp_411|
          Length = 394

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +3

Query: 249 IMNVF*IYKLFLVN----IFALFVGHSYTPTKL 335
           I+N+F  Y LFL+N    IF LF G  Y P  L
Sbjct: 158 IVNMFGFYCLFLINSLLSIFCLFFGMFYIPASL 190
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>FORD1_AQUAE (O67251) Ferredoxin oxidoreductase 1 subunit forD (EC 1.-.-.-)|
           (Ferredoxin oxidoreductase 1 delta subunit)
          Length = 79

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 293 FCPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVTEADSK 445
           FCP   TL+Y +E   A    L CK C   V   ++    D   +  A+++
Sbjct: 23  FCPEPNTLMYTDEGHHAYVNTLRCKGCALCVYVCSELLKRDSIEMVYAENR 73
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>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1427

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRTLIYPNEALQAQCTHL---YCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+   +  +   +    L    C  C   ++      P++ +L  
Sbjct: 888  ITEVNGLPPHYVCPGCKYNEFITDGSVSSGADLPDKNCPNCGVLLSKDGHDIPFETFLGF 947

Query: 431  EADSKPLVDSNKS 469
            E D +P +D N S
Sbjct: 948  EGDKEPDIDLNFS 960
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>PJA1_HUMAN (Q8NG27) Ubiquitin protein ligase Praja1 (EC 6.3.2.-) (RING finger|
           protein 70)
          Length = 643

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNE-ALQAQCTHLYCKPCLAYVAATTQACP 409
           E  CP+C +     E A +  C H + KPC++     +  CP
Sbjct: 592 EMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCP 633
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>RN125_MOUSE (Q9D9R0) RING finger protein 125 (EC 6.3.2.-)|
          Length = 232

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAATTQ--ACPY-DGYLVTE 433
           C VC  +++  + ++ +C H++C+ C+A          CPY   YL +E
Sbjct: 36  CSVCLEVLH--QPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSE 82
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>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)|
          Length = 545

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +2

Query: 269 IQTLPGEYFCPVCRTLIYPNEALQAQCTHLYCKPC---LAYVAATTQACPYDGYLVTEAD 439
           +++L  E  C +C  L Y  + +   C H++C+ C   +  V+     CP      T+ +
Sbjct: 7   LRSLEEEVTCSIC--LDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKEN 64

Query: 440 SKPLVDSNKSLAETIGKVTV 499
            +P V    SL E I ++ V
Sbjct: 65  IRP-VWQLASLVENIERLKV 83
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>E41L1_HUMAN (Q9H4G0) Band 4.1-like protein 1 (Neuronal protein 4.1) (4.1N)|
          Length = 881

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 261 IHSLSKPIVRPH*LLSSKGSDAGRENRLPATPAQQQDKGS 142
           I+ L + +  P+  L  +  D  RE RLP++PA    KG+
Sbjct: 511 INELKRTLKEPNSKLIHRDRDWERERRLPSSPASPSPKGT 550
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>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50|
           kDa-stimulated trans-acting factor) (Staf-50)
          Length = 498

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           E  CP+C  L+   E L   C H +C+ C+
Sbjct: 12  EVTCPICLELL--TEPLSLDCGHSFCQACI 39
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>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3 (EC 3.6.1.-)
           (Sucrose nonfermenting protein 2-like 3) (TNF-response
           element-binding protein) (P113)
          Length = 1003

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 296 CPVCR-TLIYPNEALQAQCTHLYCKPCLAYVAATTQ---ACP 409
           C +C  +L +P   +   C H++CKPC+  V  + Q    CP
Sbjct: 754 CAICLDSLTFP---VITHCAHVFCKPCICQVIHSEQPHAKCP 792
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>RNF5_CAEEL (Q09463) RING finger protein 5|
          Length = 235

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +2

Query: 296 CPVCRTLIYPNEALQAQCTHLYCKPCLAYVAAT---TQACPYDGYLVTEADSKPLVDSNK 466
           C +C  L    +A+ + C HL+C PCL+    T    Q CP           K  +D NK
Sbjct: 26  CNIC--LDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPV---------CKSAIDGNK 74
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>DPO3_CLOPE (Q8XJR3) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1449

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
 Frame = +2

Query: 260  ILNIQTLPGEYFCPVCRT---LIYPNEALQAQCTHLYCKPCLAYVAATTQACPYDGYLVT 430
            I  +  LP  Y CP C+     +  + +  A      C  C A         P++ +L  
Sbjct: 911  ITEVNGLPPHYVCPNCKKSEFFLDGSISSGADLPDKNCPDCGAKYIKDGHDIPFETFLGF 970

Query: 431  EADSKPLVDSNKS 469
            E D +P +D N S
Sbjct: 971  EGDKEPDIDLNFS 983
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>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)|
          Length = 488

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 287 EYFCPVCRTLIYPNEALQAQCTHLYCKPCL 376
           E  CP+C  L+   E L   C H +C+ C+
Sbjct: 12  EVTCPICLELL--TEPLSIDCGHSFCQACI 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,693,213
Number of Sequences: 219361
Number of extensions: 1498210
Number of successful extensions: 4758
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4748
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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