Clone Name | bastl15a06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 239 atgggtttcgataatgaatgtattctgaatatacaaactcttcctggtgaatatttttgc 298 ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| || Sbjct: 2720860 atgggtttcgataatgagtgtgttctgaatattcaaactcttcctggtgaatatttctgt 2720919 Query: 299 cctgtttgtcggacactcatataccccaacgaagctctgcaagctcagtgcacacatctc 358 |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 2720920 cctgtttgtcggacgctcatatgtcccaacgaagctctgcaaactcagtgcacacatctc 2720979 Query: 359 tactgcaaaccttgcttggcttatgtagcagcaaccacacaagcctgcccttatgatggt 418 ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 2720980 tactgcaaaccctgcttggcttacatagtggcaacaacacaagcctgcccttatgatggc 2721039 Query: 419 tacttagtgacggaagctgattccaag 445 || || || || ||||||||||||||| Sbjct: 2721040 tatttggttacagaagctgattccaag 2721066 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 444 agcctctggtggattcaaataaatcacttgctgagacaattggtaaagttacagt 498 |||||||| |||| ||||||||| | ||||||||||||||||||||||||||||| Sbjct: 2721167 agcctctgatggaatcaaataaaccccttgctgagacaattggtaaagttacagt 2721221 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 24495481 cctcccctcttcttcctcctcctcc 24495505 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||||| ||||||| Sbjct: 23922508 ttcctcctcctccaccaccaccaccacc 23922535 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctcctcctccaccaccatcaccacca 76 ||||||||||||||||| |||||||| Sbjct: 25097300 ctcctcctccaccaccaccaccacca 25097275 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 14137582 cctcccctctccttcctcctcctcc 14137606 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 8881121 cctcccctctccttcctcctcctcc 8881097 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 tcctcctccaccaccatcaccaccacct 79 ||||||||| |||||| ||||||||||| Sbjct: 23922509 tcctcctcctccaccaccaccaccacct 23922536 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcctcctcc 57 |||||||||||||||||||| Sbjct: 22040618 tcccctcttcttcctcctcc 22040637 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 19116458 cctcttcttcctcctcctcc 19116439 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacca 73 |||||||||||||||||| ||||| Sbjct: 13407442 cctcctcctccaccaccaccacca 13407465 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcacca 73 |||||||||||||||||| ||||| Sbjct: 11611083 cctcctcctccaccaccaccacca 11611060 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctc 59 |||||||||||||||||||| Sbjct: 11229787 ccctcttcttcctcctcctc 11229806 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 cccctcttcttcctcctcctccaccacc 66 |||||| || |||||||||||||||||| Sbjct: 7831084 cccctcctcctcctcctcctccaccacc 7831111
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 239 atgggtttcgataatgaatgtattctgaatatacaaactcttcctggtgaatatttttgc 298 ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| || Sbjct: 2720804 atgggtttcgataatgagtgtgttctgaatattcaaactcttcctggtgaatatttctgt 2720863 Query: 299 cctgtttgtcggacactcatataccccaacgaagctctgcaagctcagtgcacacatctc 358 |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 2720864 cctgtttgtcggacgctcatatgtcccaacgaagctctgcaaactcagtgcacacatctc 2720923 Query: 359 tactgcaaaccttgcttggcttatgtagcagcaaccacacaagcctgcccttatgatggt 418 ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 2720924 tactgcaaaccctgcttggcttacatagtggcaacaacacaagcctgcccttatgatggc 2720983 Query: 419 tacttagtgacggaagctgattccaag 445 || || || || ||||||||||||||| Sbjct: 2720984 tatttggttacagaagctgattccaag 2721010 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 444 agcctctggtggattcaaataaatcacttgctgagacaattggtaaagttacagt 498 |||||||| |||| ||||||||| | ||||||||||||||||||||||||||||| Sbjct: 2721111 agcctctgatggaatcaaataaaccccttgctgagacaattggtaaagttacagt 2721165 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 24423687 cctcccctcttcttcctcctcctcc 24423711 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||||| ||||||| Sbjct: 23850714 ttcctcctcctccaccaccaccaccacc 23850741 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 51 ctcctcctccaccaccatcaccacca 76 ||||||||||||||||| |||||||| Sbjct: 25025476 ctcctcctccaccaccaccaccacca 25025451 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 14091862 cctcccctctccttcctcctcctcc 14091886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 8881004 cctcccctctccttcctcctcctcc 8880980 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 tcctcctccaccaccatcaccaccacct 79 ||||||||| |||||| ||||||||||| Sbjct: 23850715 tcctcctcctccaccaccaccaccacct 23850742 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcccctcttcttcctcctcc 57 |||||||||||||||||||| Sbjct: 21968963 tcccctcttcttcctcctcc 21968982 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 19042685 cctcttcttcctcctcctcc 19042666 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacca 73 |||||||||||||||||| ||||| Sbjct: 13361716 cctcctcctccaccaccaccacca 13361739 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcacca 73 |||||||||||||||||| ||||| Sbjct: 11610754 cctcctcctccaccaccaccacca 11610731 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctc 59 |||||||||||||||||||| Sbjct: 11229458 ccctcttcttcctcctcctc 11229477 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 cccctcttcttcctcctcctccaccacc 66 |||||| || |||||||||||||||||| Sbjct: 7830965 cccctcctcctcctcctcctccaccacc 7830992
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 239 atgggtttcgataatgaatgtattctgaatatacaaactcttcctggtgaatatttttgc 298 ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| || Sbjct: 89786 atgggtttcgataatgagtgtgttctgaatattcaaactcttcctggtgaatatttctgt 89845 Query: 299 cctgtttgtcggacactcatataccccaacgaagctctgcaagctcagtgcacacatctc 358 |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 89846 cctgtttgtcggacgctcatatgtcccaacgaagctctgcaaactcagtgcacacatctc 89905 Query: 359 tactgcaaaccttgcttggcttatgtagcagcaaccacacaagcctgcccttatgatggt 418 ||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 89906 tactgcaaaccctgcttggcttacatagtggcaacaacacaagcctgcccttatgatggc 89965 Query: 419 tacttagtgacggaagctgattccaag 445 || || || || ||||||||||||||| Sbjct: 89966 tatttggttacagaagctgattccaag 89992 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 444 agcctctggtggattcaaataaatcacttgctgagacaattggtaaagttacagt 498 |||||||| |||| ||||||||| | ||||||||||||||||||||||||||||| Sbjct: 90093 agcctctgatggaatcaaataaaccccttgctgagacaattggtaaagttacagt 90147
>gb|U29397.1|RNU29397 Rattus norvegicus plasma membrane Ca2+ ATPase isoform 3 (PMCA3) gene, 5' flanking region Length = 3126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||||| |||||||||||||||||| |||||||||| Sbjct: 2724 ccctcttctccctcctcctccaccaccaccaccaccacc 2762 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 2675 tcctcctcctccaccaccaccaccaccacc 2704 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 2672 tcctcctcctcctccaccaccaccaccacc 2701 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 2761 ccaccaccatcaccaccacc 2780
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 39 cccctcttcttcctcctcctccaccaccatcaccacca 76 |||||| ||||||||||||||||||| ||||||||||| Sbjct: 53301 cccctcctcttcctcctcctccaccatcatcaccacca 53264
>gb|AC127185.3| Rattus norvegicus BAC CH230-28E5 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 233648 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||||||||| || |||||||||| Sbjct: 117398 cctcttcttcctcctcctccaccatcaccaccaccacc 117435 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||| ||||||||| ||||||||||||||||| Sbjct: 117395 cctcctcttcttcctcctcctccaccatcaccaccacc 117432
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence Length = 233833 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| |||||||||||||||||||||| |||||||||| Sbjct: 141871 cctcctcttcctcctcctccaccaccaccaccaccacc 141834
>emb|CT025599.16| Mouse DNA sequence from clone RP24-254G12 on chromosome 14, complete sequence Length = 170436 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| |||||||||||||||||||||| |||||||||| Sbjct: 70298 cctcctcttcctcctcctccaccaccaccaccaccacc 70261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 70383 tcctcctcctccaccaccaccaccaccacct 70353 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||||| ||||||||||||||| Sbjct: 70157 cctcctcctccactaccatcaccaccacc 70129 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 70385 cctcctcctcctccaccaccaccaccacc 70357
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 95378 tcctcctcctccaccaccaccaccaccacct 95408 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 95315 tcctcctcctccaccaccaccaccaccacct 95345 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 95207 tcctcctcctccaccaccaccaccaccacct 95237 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 95081 tcctcctcctccaccaccaccaccacc 95107 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||| |||||| ||||||||||| Sbjct: 95078 tcctcctcctcctccaccaccaccaccacct 95108 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 95312 tcctcctcctcctccaccaccaccaccacc 95341 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 95204 tcctcctcctcctccaccaccaccaccacc 95233 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccacc 66 |||| ||||||||||||||||||||| Sbjct: 95178 cctcctcttcctcctcctccaccacc 95203 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 95376 cctcctcctcctccaccaccaccaccacc 95404
>gb|AC123658.9| Mus musculus chromosome 15, clone RP23-192C13, complete sequence Length = 211158 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 140656 tcctcctcctccaccaccaccaccaccacct 140626 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 140659 tcctcctcctcctccaccaccaccaccacc 140630 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 13051 cctcttcttcctcctcctcc 13032
>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence Length = 207268 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 142837 tcctcctcctccaccaccaccaccaccacct 142867 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 142835 cctcctcctcctccaccaccaccaccacc 142863
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccacc 75 |||| |||||||||||||||||||||| ||||||| Sbjct: 64507 cctcctcttcctcctcctccaccaccaccaccacc 64473
>gb|AC068627.16| Mus Musculus Chromosome 5 RP23-389F6, complete sequence Length = 180673 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccacc 75 ||||||| ||||||||||||||||||| ||||||| Sbjct: 110868 cctcttcctcctcctcctccaccaccaccaccacc 110834 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacct 79 |||| ||||||||||||||| |||||| ||||||||||| Sbjct: 110871 cctcctcttcctcctcctcctccaccaccaccaccacct 110833 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 110909 tcctcctcctccaccaccaccaccacc 110883 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||| |||||| ||||||||||| Sbjct: 110912 tcctcctcctcctccaccaccaccaccacct 110882
>gb|AC007263.4|AC007263 Homo sapiens chromosome 14 clone RP11-79J20 containing gene for checkpoint supporessor 1 (CHES1) gene, partial cds, complete sequence Length = 167390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 88532 tcctcctcctccaccaccaccaccaccacct 88502 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 88483 cctcctcctccaccaccaccaccaccacc 88455 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||| ||||| Sbjct: 88679 tcctcctcctccaccaccaccacctccacc 88650 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| | |||||||| Sbjct: 88586 tcctcctcctccaccaccacctccaccacc 88557 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 88534 cctcctcctcctccaccaccaccaccacc 88506 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacaccaa 86 ||||||||||||||| |||| ||||||| Sbjct: 124862 ccaccaccatcaccaacaccaacaccaa 124835 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 124745 ccaccaccatcaccaccacc 124726 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||| ||||||||||| Sbjct: 88657 cctccaccaccaccaccaccacct 88634
>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence Length = 205702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 48 ttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||||| |||||||||| Sbjct: 85433 ttcctcctcctccaccaccaccaccaccacc 85403
>emb|AL357093.4|CNS05TDS Human chromosome 14 DNA sequence BAC R-356K23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 8169 tcctcctcctccaccaccaccaccaccacct 8139 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 8120 cctcctcctccaccaccaccaccaccacc 8092 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||| ||||| Sbjct: 8316 tcctcctcctccaccaccaccacctccacc 8287 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| | |||||||| Sbjct: 8223 tcctcctcctccaccaccacctccaccacc 8194 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 8171 cctcctcctcctccaccaccaccaccacc 8143 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacaccaa 86 ||||||||||||||| |||| ||||||| Sbjct: 45323 ccaccaccatcaccaacaccaacaccaa 45296 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 45206 ccaccaccatcaccaccacc 45187 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||| ||||||||||| Sbjct: 8294 cctccaccaccaccaccaccacct 8271
>emb|BX005231.8| Mouse DNA sequence from clone RP23-392C6 on chromosome X, complete sequence Length = 129970 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||||||||||| Sbjct: 74219 tcctcctcctccaccaccaccaccaccacct 74189 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 74222 tcctcctcctcctccaccaccaccaccacc 74193
>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence Length = 206081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccacc 75 ||||||| |||||| |||||||||||||||||||| Sbjct: 83257 cctcttcctcctccacctccaccaccatcaccacc 83223 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| ||||| |||| Sbjct: 83171 tcctcctcctccaccaccaccaccatcacc 83142 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 |||||| || |||||||||||||||||| Sbjct: 83165 tcctccaccaccaccaccatcaccacca 83138
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctccaccaccatcaccaccacctacaccaa 86 ||||||||| ||||||||||||||| || || |||||||||| ||||||| Sbjct: 66745 cctcccctcctcttcctcctcctccttcatcaccaccaccaccaacaccaa 66795
>gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, complete sequence Length = 203962 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 152973 tcctcctcctccaccaccaccaccaccacc 153002 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 152970 tcctcctcctcctccaccaccaccaccacc 152999 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 152950 cctcttcttcctcctcctcc 152969
>ref|NM_124996.2| Arabidopsis thaliana nucleic acid binding AT5G56140 mRNA, complete cds Length = 1359 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||||| |||||||| Sbjct: 50 cttcctcctcctccaccaccaccaccacca 21
>gb|AC170188.2| Mus musculus BAC clone RP24-195M20 from chromosome 13, complete sequence Length = 165687 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 91688 tcctcctcctccaccaccaccaccaccacc 91659 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 91691 tcctcctcctcctccaccaccaccaccacc 91662
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 137957 tcctcctcctccaccaccaccaccaccacc 137928 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 38 tcccctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||| || |||||||||||| |||||| |||||||||| Sbjct: 137971 tcccctcctcctcctcctcctcctccaccaccaccaccacc 137931
>gb|AC116452.9| Mus musculus chromosome 1, clone RP24-287C2, complete sequence Length = 171792 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 71745 tcctcctcctccaccaccaccaccaccacc 71774 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 71742 tcctcctcctcctccaccaccaccaccacc 71771
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 122189 tcctcctcctccaccaccaccaccaccacc 122218 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 122186 tcctcctcctcctccaccaccaccaccacc 122215
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| |||||||| ||||||||||||| |||||||||| Sbjct: 26124 cctcctcttcctcttcctccaccaccaccaccaccacc 26087
>gb|AC149575.1| Populus trichocarpa clone Pop1-41G18, complete sequence Length = 111678 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 32530 tcctcctcctccaccaccaccaccaccacc 32501 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||| ||||||||||| Sbjct: 32527 tcctcctccaccaccaccaccaccaccacct 32497 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 32533 tcctcctcctcctccaccaccaccaccacc 32504 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacaccaaa 87 ||||||||| ||||||||||||| ||||| Sbjct: 32364 ccaccaccaccaccaccacctactccaaa 32336
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccac 74 ||||||| ||||||||| |||||||||||||||| Sbjct: 7775 cctcttcctcctcctccaccaccaccatcaccac 7742 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccac 77 |||||||||||||||||||||| || |||||| Sbjct: 7773 tcttcctcctcctccaccaccaccatcaccac 7742
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 118195 cctcctcctccaccaccaccaccaccacct 118166
>gb|AC122527.3| Mus musculus BAC clone RP24-502E10 from chromosome 6, complete sequence Length = 180682 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||||||| |||||||||||| |||||||||| Sbjct: 120043 cctcctcttcctccccctccaccaccaccaccaccacc 120080 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tccaccaccatcaccaccacc 78 ||||||||||||||||||||| Sbjct: 62667 tccaccaccatcaccaccacc 62647
>gb|AC121531.10| Mus musculus chromosome 1, clone RP24-459N9, complete sequence Length = 172704 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 41031 tcctcctcctccaccaccaccaccaccacc 41002 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 41034 tcctcctcctcctccaccaccaccaccacc 41005
>gb|AC163033.4| Mus musculus BAC clone RP23-432F6 from chromosome 12, complete sequence Length = 201510 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 172751 tcctcctcctccaccaccaccaccaccacc 172780 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 172748 tcctcctcctcctccaccaccaccaccacc 172777
>ref|XM_987567.1| PREDICTED: Mus musculus hypothetical protein LOC666995 (LOC666995), mRNA Length = 543 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 202 tcctcctcctccaccaccaccaccaccacc 231 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 199 tcctcctcctcctccaccaccaccaccacc 228
>ref|XM_988720.1| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 2 (3200001K10Rik), mRNA Length = 9397 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1173 cctcctcctccaccaccaccaccaccacct 1202
>ref|XM_988761.1| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 3 (3200001K10Rik), mRNA Length = 9517 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1293 cctcctcctccaccaccaccaccaccacct 1322
>ref|XM_973895.1| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 4 (3200001K10Rik), mRNA Length = 9397 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1173 cctcctcctccaccaccaccaccaccacct 1202
>ref|XM_355585.5| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 1 (3200001K10Rik), mRNA Length = 9517 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1293 cctcctcctccaccaccaccaccaccacct 1322
>ref|XM_907871.2| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 4 (3200001K10Rik), mRNA Length = 9379 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1173 cctcctcctccaccaccaccaccaccacct 1202
>ref|XM_920626.2| PREDICTED: Mus musculus RIKEN cDNA 3200001K10 gene, transcript variant 6 (3200001K10Rik), mRNA Length = 9499 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||| ||||||||||| Sbjct: 1293 cctcctcctccaccaccaccaccaccacct 1322
>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete sequence Length = 202415 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 100856 tcctcctcctccaccaccaccaccaccacc 100827 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 38 tcccctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||| || |||||||||||| |||||| |||||||||| Sbjct: 100870 tcccctcctcctcctcctcctcctccaccaccaccaccacc 100830
>ref|XM_540739.2| PREDICTED: Canis familiaris similar to formin binding protein 4 (LOC483619), mRNA Length = 3171 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 2841 tcctcctcctccaccaccaccaccaccacc 2870 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 2838 tcctcctcctcctccaccaccaccaccacc 2867
>gb|AC117239.4| Mus musculus BAC clone RP24-117K6 from chromosome 18, complete sequence Length = 150804 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 101821 tcctcctcctccaccaccaccaccaccacc 101792 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 101823 cctcctcctcctccaccaccaccaccacc 101795
>gb|AC132100.3| Mus musculus BAC clone RP24-294D10 from chromosome 18, complete sequence Length = 173949 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 10693 tcctcctcctccaccaccaccaccaccacc 10664 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcacc 72 |||||||||||||||||||||||| Sbjct: 81111 tcctcctcctccaccaccatcacc 81134 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 10695 cctcctcctcctccaccaccaccaccacc 10667
>gb|AC146544.2| Gasterosteus aculeatus clone CH213-80N20, complete sequence Length = 181589 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||| |||||||||||| |||||| |||||||||| Sbjct: 74735 cctcttcctcctcctcctcctccaccaccaccaccacc 74772 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||||||||||||| || ||| |||||||||| Sbjct: 74732 cctcctcttcctcctcctcctcctccaccaccaccacc 74769
>gb|AC125171.4| Mus musculus BAC clone RP24-475M20 from chromosome 6, complete sequence Length = 167590 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||||||| |||||||||||| |||||||||| Sbjct: 134734 cctcctcttcctccccctccaccaccaccaccaccacc 134771 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tccaccaccatcaccaccacc 78 ||||||||||||||||||||| Sbjct: 77358 tccaccaccatcaccaccacc 77338
>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence Length = 195372 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 28057 tcctcctcctccaccaccaccaccaccacc 28028 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 28060 tcctcctcctcctccaccaccaccaccacc 28031
>gb|BT000873.1| Arabidopsis thaliana clone C104982 putative RNA-binding protein (At5g56140) mRNA, complete cds Length = 979 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||||| |||||||| Sbjct: 50 cttcctcctcctccaccaccaccaccacca 21
>gb|AC124170.3| Mus musculus BAC clone RP23-155H5 from 8, complete sequence Length = 235023 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 181560 tcctcctcctccaccaccaccaccaccacc 181589 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 181557 tcctcctcctcctccaccaccaccaccacc 181586 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||| ||||||||||| |||||||||| Sbjct: 117878 tcctccttctccaccaccaccaccaccacc 117907
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 14540 tcctcctcctccaccaccaccaccaccacc 14511 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 14543 tcctcctcctcctccaccaccaccaccacc 14514 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 98797 ccaccaccatcaccaccacc 98816
>gb|AC122850.4| Mus musculus BAC clone RP23-167J19 from 10, complete sequence Length = 234973 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 230507 tcctcctcctccaccaccaccaccaccacc 230478 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 230510 tcctcctcctcctccaccaccaccaccacc 230481 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 209408 ccaccaccatcaccaccacc 209389
>gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, complete sequence Length = 218449 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| |||||||||||||| Sbjct: 198082 tcctcctcctccacccccatcaccaccacc 198111
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||| |||||||||||| |||||| |||||||||| Sbjct: 53064 cctcttcctcctcctcctcctccaccaccaccaccacc 53101 Score = 44.1 bits (22), Expect = 0.44 Identities = 34/38 (89%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||||||||||||| || ||| |||||||||| Sbjct: 53061 cctcctcttcctcctcctcctcctccaccaccaccacc 53098
>gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete sequence Length = 116678 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 17951 tcctcctcctccaccaccaccaccaccacc 17922 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccacca 67 ||||||||||||||||||||| Sbjct: 114561 cttcctcctcctccaccacca 114541 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 17953 cctcctcctcctccaccaccaccaccacc 17925
>emb|AL161725.13| Human DNA sequence from clone RP11-165F24 on chromosome 9 Contains the 3' end of the gene for a novel protein (contains FLJ36253 and FLJ00026), 3 novel genes, a 60S ribosomal protein L12 (RPL21) pseudogene and a CpG island, complete sequence Length = 181179 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacctacacca 85 |||||||||||||||||||||||| ||||| Sbjct: 34477 cctccaccaccatcaccaccacctccacca 34506 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||||||||| ||||| Sbjct: 34720 cctcctccaccatcaccaccacctccacca 34749 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||| ||| ||||||||||||||||| ||||| Sbjct: 34681 cctccaccatcaccatcaccaccacctccacca 34713 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccacc 75 |||||||||||||||||||| Sbjct: 34948 cctccaccaccatcaccacc 34967 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 34801 ccaccaccatcaccaccacc 34820 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34666 ccaccatcaccaccacctccacca 34689 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34648 ccaccatcaccaccacctccacca 34671 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34501 ccaccatcaccaccacctccacca 34524 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34441 ccaccatcaccaccacctccacca 34464 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34384 ccaccatcaccaccacctccacca 34407 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34284 ccaccatcaccaccacctccacca 34307 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacctacacca 85 |||||| | ||| ||||||||||||||||| ||||| Sbjct: 34233 cctccttcaccatcaccatcaccaccacctccacca 34268 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34110 ccaccatcaccaccacctccacca 34133 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 34092 ccaccatcaccaccacctccacca 34115 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacctacacca 85 |||||| | ||| ||||||||||||||||| ||||| Sbjct: 33921 cctccttcaccatcaccatcaccaccacctccacca 33956 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 33870 ccaccatcaccaccacctccacca 33893
>gb|AC162918.3| Mus musculus BAC clone RP23-370K14 from chromosome 10, complete sequence Length = 165624 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 145919 tcctcctcctccaccaccaccaccaccacc 145948 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 145916 tcctcctcctcctccaccaccaccaccacc 145945
>gb|AC139238.5| Mus musculus BAC clone RP24-403G3 from chromosome 12, complete sequence Length = 170371 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 103584 tcctcctcctccaccaccaccaccaccacc 103555 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 103587 tcctcctcctcctccaccaccaccaccacc 103558
>emb|AL596187.15| Mouse DNA sequence from clone RP23-287H9 on chromosome 11 Contains part of a novel gene, the 5' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9) and a CpG island, complete sequence Length = 202358 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 118018 tcctcctcctccaccaccaccaccaccacc 117989 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 118021 tcctcctcctcctccaccaccaccaccacc 117992
>emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chromosome 11 Contains the 3' end of the Gas7 gene for growth arrest specific 7, the Rcvrn gene for recoverin, the Glp2r gene for glucagon-like peptide 2 receptor, a novel gene and the gene for a novel protein (1110001P11Rik), complete sequence Length = 212636 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 38544 tcctcctcctccaccaccaccaccaccacc 38515 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 38546 cctcctcctcctccaccaccaccaccacc 38518
>emb|AL672240.13| Mouse DNA sequence from clone RP23-27I16 on chromosome 11, complete sequence Length = 224603 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 212121 tcctcctcctccaccaccaccaccaccacc 212150 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 212118 tcctcctcctcctccaccaccaccaccacc 212147
>gb|AY118647.1| Drosophila melanogaster SD05267 full insert cDNA Length = 4073 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 251 tcctcctcctccaccaccaccaccaccacc 222
>gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169209 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 107274 tcctcctcctccaccaccaccaccaccacc 107303
>gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191923 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 26662 tcctcctcctccaccaccaccaccaccacc 26633 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 26665 tcctcctcctcctccaccaccaccaccacc 26636
>dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clone: CH230-65K18, complete sequence Length = 193613 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccacc 75 |||||||||||||||||||||||||| Sbjct: 25026 cctcctcctccaccaccatcaccacc 25001
>ref|NM_140569.2| Drosophila melanogaster mind bomb 1 CG5841-RA (mib1), mRNA Length = 4026 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 251 tcctcctcctccaccaccaccaccaccacc 222
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence Length = 230889 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 197898 tcctcctcctccaccaccaccaccaccacc 197927 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||| ||||||||||| Sbjct: 197901 tcctcctccaccaccaccaccaccaccacct 197931 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 197895 tcctcctcctcctccaccaccaccaccacc 197924
>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240079 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 |||| ||||||||| |||||||||||| |||||||||| Sbjct: 226300 cctcctcttcctccccctccaccaccaccaccaccacc 226263 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 152403 cctcttcttcctcctcctcc 152422
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 2260 tcctcctcctccaccaccaccaccaccacc 2289 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 2257 tcctcctcctcctccaccaccaccaccacc 2286
>emb|CR353896.1| Gallus gallus finished cDNA, clone ChEST361d18 Length = 766 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||| |||||||||||| |||||| |||||||||| Sbjct: 112 cctcttcctcctcctcctcctccaccaccaccaccacc 149 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccac 77 ||||||||||||||||||| ||||||||| Sbjct: 123 tcctcctcctccaccaccaccaccaccac 151
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 12141387 tcctcctcctccaccaccaccaccaccacc 12141358 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||| |||||||||| Sbjct: 25298100 ctcctcctccaccaccaccaccaccacc 25298127 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 39 cccctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||| || |||||| |||||||||||| |||||||||| Sbjct: 6224650 cccctcctcctcctccacctccaccaccaccaccaccacc 6224611 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 38 tcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||| Sbjct: 24658630 tcccctcttcttcctcctcctcc 24658608 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcacc 72 |||||||||||||||||||||| |||| Sbjct: 6009671 tcttcctcctcctccaccaccaccacc 6009645 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| ||| |||||||||| Sbjct: 26869918 tcctcctcctccacctccaccaccaccacc 26869889 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||| ||||| Sbjct: 24637444 tcctcctcctccaccaccaccaccgccacc 24637473 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 12141390 tcctcctcctcctccaccaccaccaccacc 12141361 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 28731882 cctcctcctccacctccaccaccaccacc 28731854 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 ctcctccaccaccatcaccaccacc 78 |||||||||||||| |||||||||| Sbjct: 16291379 ctcctccaccaccaccaccaccacc 16291403 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatc 69 ||||||||||||||||||||| Sbjct: 3639912 tcctcctcctccaccaccatc 3639932 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 2616948 cctcctcctccacctccaccaccaccacc 2616976 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 29662010 cctcttcttcctcctcctcc 29661991 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 25610689 ccaccaccatcaccaccacc 25610670 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 25304189 ccaccaccatcaccaccacc 25304170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 23796622 cctcttcttcctcctcctcc 23796641 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 2308415 cctcttcttcctcctcctcc 2308434
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 183995 tcctcctcctccaccaccaccaccaccacc 183966 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 183998 tcctcctcctcctccaccaccaccaccacc 183969
>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete sequence Length = 218107 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||||| ||||||||||| Sbjct: 134656 tcttcctcctcctccaccacccccaccaccacct 134623
>gb|AC090653.36| Mus musculus strain C57BL/6J chromosome 17 clone rp23-260k1, complete sequence Length = 191844 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||||| ||||||||||| Sbjct: 147986 tcttcctcctcctccaccacccccaccaccacct 148019
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468A12 Length = 143018 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 84176 tcctcctcctccaccaccaccaccaccacc 84147 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 84179 tcctcctcctcctccaccaccaccaccacc 84150
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 166643 tcctcctcctccaccaccaccaccaccacc 166614 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 166646 tcctcctcctcctccaccaccaccaccacc 166617
>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7 Length = 82033 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||||| |||||||| Sbjct: 59831 cttcctcctcctccaccaccaccaccacca 59802
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 20889 tcctcctcctccaccaccaccaccaccacc 20860 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 20891 cctcctcctcctccaccaccaccaccacc 20863
>gb|AC134787.6| Mus musculus chromosome 1, clone RP24-477E13, complete sequence Length = 150960 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 111318 tcctcctcctccaccaccaccaccaccacc 111289
>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete sequence Length = 252201 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 243259 tcctcctcctccaccaccaccaccaccacc 243288
>emb|AL732461.23| Mouse DNA sequence from clone RP23-95K12 on chromosome X, complete sequence Length = 245751 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 233608 tcctcctcctccaccaccaccaccaccacc 233637 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 233605 tcctcctcctcctccaccaccaccaccacc 233634
>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence Length = 151468 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 90762 tcctcctcctccaccaccaccaccaccacc 90791 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||| ||||||||||| Sbjct: 90765 tcctcctccaccaccaccaccaccaccacct 90795 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 90759 tcctcctcctcctccaccaccaccaccacc 90788
>gb|AC140376.3| Mus musculus BAC clone RP24-78P21 from 12, complete sequence Length = 246636 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| ||||||||||||||||| Sbjct: 64642 tcctcctcctcctccaccatcaccaccacc 64671 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||| || |||||||||| Sbjct: 64645 tcctcctcctccaccatcaccaccaccacc 64674 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 ctcccctcttcttcctcctcctcc 60 |||||||| ||||||||||||||| Sbjct: 191267 ctcccctcctcttcctcctcctcc 191290 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 64628 cctcttcttcctcctcctcc 64647
>gb|AC134855.5| Mus musculus BAC clone RP24-301M10 from 8, complete sequence Length = 142427 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 27116 tcctcctcctccaccaccaccaccaccacc 27145 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||| ||||||||||| Sbjct: 27119 tcctcctccaccaccaccaccaccaccacct 27149 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 27113 tcctcctcctcctccaccaccaccaccacc 27142
>gb|AC140422.2| Mus musculus BAC clone RP24-445D5 from 3, complete sequence Length = 172767 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| |||||||||||||| Sbjct: 13024 tcctcctcctccacccccatcaccaccacc 13053
>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence Length = 154142 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 25996 tcctcctcctccaccaccaccaccaccacc 26025 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 25993 tcctcctcctcctccaccaccaccaccacc 26022
>gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, complete sequence Length = 175487 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 156330 tcctcctcctccaccaccaccaccaccacc 156301
>gb|AC139381.4| Mus musculus BAC clone RP23-171D1 from 13, complete sequence Length = 242105 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 179918 tcctcctcctccaccaccaccaccaccacc 179947 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 179915 tcctcctcctcctccaccaccaccaccacc 179944
>gb|AC142273.3| Mus musculus BAC clone RP23-236A6 from 10, complete sequence Length = 130802 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 79594 tcctcctcctccaccaccaccaccaccacc 79623 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||| |||||| |||||||||| Sbjct: 79590 ttcctcctcctcctccaccaccaccaccacc 79620 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 35724 cctcttcttcctcctcctcc 35705
>gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complete sequence Length = 192317 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 99090 tcctcctcctccaccaccaccaccaccacc 99061 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 99093 tcctcctcctcctccaccaccaccaccacc 99064
>gb|AC136316.13| Mus musculus chromosome 1, clone RP24-331K22, complete sequence Length = 197109 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 173484 tcctcctcctccaccaccaccaccaccacc 173513
>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197906 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 187616 tcctcctcctccaccaccaccaccaccacc 187587 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 187618 cctcctcctcctccaccaccaccaccacc 187590 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccacca 76 ||||||||||||||| |||||||| Sbjct: 187789 cctcctccaccaccaccaccacca 187766
>emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chromosome X, complete sequence Length = 215390 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||||||||| Sbjct: 144904 tcctcctcctccaccaccaccaccaccacc 144933 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 144901 tcctcctcctcctccaccaccaccaccacc 144930
>emb|AL591913.14| Mouse DNA sequence from clone RP23-120A4 on chromosome 15, complete sequence Length = 196812 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccac 74 ||||||| ||||||||| |||||||||||||||| Sbjct: 112814 cctcttcctcctcctccaccaccaccatcaccac 112847 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccac 77 |||||||||||||||||||||| || |||||| Sbjct: 112816 tcttcctcctcctccaccaccaccatcaccac 112847
>emb|AL691478.5| Mouse DNA sequence from clone RP23-137F6 on chromosome 3, complete sequence Length = 120928 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||||| |||||||| Sbjct: 89512 cttcctcctcctccaccaccaccaccacca 89483
>ref|XM_482277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||||||||||| |||||| Sbjct: 5 cctccaccaccaccatcaccaccaccaacacca 37
>ref|NM_201844.1| Arabidopsis thaliana unknown protein AT2G30985 mRNA, complete cds Length = 485 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccac 74 ||||||||||||||||||||||||| Sbjct: 279 cctcctcctccaccaccatcaccac 303
>ref|XM_482974.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1891 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 272 cctcctcctccaccaccaccaccaccacc 244
>gb|AC154392.18| Mus musculus chromosome 1, clone RP23-413K6, complete sequence Length = 205076 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||| ||||||||||||||||||||| ||||| Sbjct: 54647 cctccaccaccaccatcaccaccacctccacca 54615 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 60 caccaccatcaccaccacctacacca 85 |||||||||||||||||||| ||||| Sbjct: 54862 caccaccatcaccaccacctccacca 54837 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||| ||||||||||| Sbjct: 54695 cctccaccaccaccaccaccacct 54672 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 ccaccatcaccaccacctacacca 85 |||||||||||||||||| ||||| Sbjct: 54524 ccaccatcaccaccacctccacca 54501
>gb|AC158976.14| Mus musculus chromosome 15, clone RP24-71M3, complete sequence Length = 182465 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||| ||||||||||| Sbjct: 91506 ctcctcctccaccaccaccaccaccacct 91534 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||| ||||||||||||||||||| Sbjct: 16842 cctcctctcttcttcctcctcctcc 16818
>gb|AY022122.1| Oryza sativa microsatellite MRG4447 containing (TC)X17, closest to marker G148, genomic sequence Length = 234 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 60 cctcccctcttcttcctcctcctcc 84
>gb|AC099705.7| Mus musculus chromosome 1, clone RP23-256I3, complete sequence Length = 166683 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcctcctcctcca 61 ||||||||||||||||||||||||| Sbjct: 114882 ctcccctcttcttcctcctcctcca 114858
>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence Length = 153627 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||| ||||| ||||| Sbjct: 97953 cctcctccaccaccatcaccatcacctccacca 97985 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 97863 cctccaccaccatcaccaccacc 97885
>ref|XM_414720.1| PREDICTED: Gallus gallus similar to F-box and leucine-rich repeat protein 16; chromosome 16 open reading frame 22 (LOC416405), mRNA Length = 1697 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 34 cccctcccctcttcttcctcctcctccaccacc 66 ||||||| |||||| |||||||||||||||||| Sbjct: 29 cccctcctctcttcctcctcctcctccaccacc 61
>ref|XM_324419.1| Neurospora crassa OR74A hypothetical protein (NCU05063.1) partial mRNA Length = 1038 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 tcttcttcctcctcctccaccaccatcaccacc 75 |||||||||||||| ||| |||||||||||||| Sbjct: 622 tcttcttcctcctcttcctccaccatcaccacc 654
>ref|XM_951344.1| Neurospora crassa OR74A hypothetical protein (NCU05063.1) partial mRNA Length = 1038 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 43 tcttcttcctcctcctccaccaccatcaccacc 75 |||||||||||||| ||| |||||||||||||| Sbjct: 622 tcttcttcctcctcttcctccaccatcaccacc 654
>gb|AC100730.8| Mus musculus chromosome 15, clone RP24-288B1, complete sequence Length = 190788 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| || |||||||||||||| Sbjct: 149894 tcttcctcctcctccccctccatcaccaccacc 149862
>gb|AC108944.4| Mus musculus BAC clone RP23-114I22 from chromosome 9, complete sequence Length = 198019 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacctacacca 85 ||||||||||||||||||| |||||| |||| ||||| Sbjct: 151665 tcctcctcctccaccaccaccaccactacctccacca 151629 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccac 77 |||||||||||| |||||| ||||||||| Sbjct: 151668 tcctcctcctcctccaccaccaccaccac 151640 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||| ||||||||||| Sbjct: 151637 cctccaccaccaccaccaccacct 151614
>gb|AC144938.3| Mus musculus BAC clone RP24-129H18 from chromosome 18, complete sequence Length = 207182 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctccaccaccatcaccacca 76 |||||||| |||||||||||||||||| |||||||| Sbjct: 56974 ccctcttcctcctcctcctccaccacccccaccacca 56938 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| |||||| | |||||||| Sbjct: 56971 tcttcctcctcctcctccaccacccccaccacc 56939
>gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203455 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||| |||||| ||||||| Sbjct: 198369 tcttcttcctcctcctcctccaccaccaccacc 198337 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccaccatcaccaccacct 79 |||||||| ||||||||| || ||| ||||||||||| Sbjct: 198372 tcttcttcttcctcctcctcctccaccaccaccacct 198336
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 166510 cctcccctcttcttcctcctcctcc 166534 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 166228 cctcccctcttcttcctcctcctcc 166252 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcct 58 ||||||||||||||||||||||| Sbjct: 166388 cctcccctcttcttcctcctcct 166410 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||||| |||||||||||| Sbjct: 166314 cctcccctcttcctcctcctcctcc 166338 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 117499 ccaccaccatcaccaccacc 117480
>gb|AC156399.9| Mus musculus 6 BAC RP24-238J9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 136911 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||| |||||| ||||||| Sbjct: 97628 tcttcttcctcctcctcctccaccaccaccacc 97596 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccaccatcaccaccacct 79 |||||||| ||||||||| || ||| ||||||||||| Sbjct: 97631 tcttcttcttcctcctcctcctccaccaccaccacct 97595
>gb|AC147769.1| Homo sapiens chromosome 16 clone PCR-16A01, complete sequence Length = 6436 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 57 ctccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||||| ||||| Sbjct: 3282 ctccaccaccatcaccaccacctccacca 3310 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 58 tccaccaccatcaccaccacctacacca 85 |||||||||||||||| ||||| ||||| Sbjct: 3399 tccaccaccatcaccatcacctccacca 3426 Score = 40.1 bits (20), Expect = 6.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||||| ||||||||| ||||| Sbjct: 3353 cctccacctccaccaccatc-ccaccacctccacca 3387 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 caccaccatcaccaccacct 79 |||||||||||||||||||| Sbjct: 3196 caccaccatcaccaccacct 3215
>gb|AC132252.2| Mus musculus BAC clone RP24-450A24 from chromosome 15, complete sequence Length = 180985 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| || |||||||||||||| Sbjct: 45742 tcttcctcctcctccccctccatcaccaccacc 45710
>gb|AF224315.1| Gallus gallus Frizzled-2 (cFz-2) mRNA, partial cds Length = 2918 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccac 77 ||||||| ||||||||||||||| ||| ||||||||| Sbjct: 2610 cctcttcctcctcctcctccacctccaccaccaccac 2646 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| ||||| |||||||||| Sbjct: 2612 tcttcctcctcctcctccacctccaccaccacc 2644
>gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complete sequence Length = 243483 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 42 ctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| ||||||| ||||||||| Sbjct: 94114 ctcttcttcctcctcctctaccaccactaccaccacc 94078
>gb|AC111087.9| Mus musculus chromosome 9, clone RP23-152O16, complete sequence Length = 231508 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacctacacca 85 ||||||||||||||||||| |||||| |||| ||||| Sbjct: 173507 tcctcctcctccaccaccaccaccactacctccacca 173543 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccac 77 |||||||||||| |||||| ||||||||| Sbjct: 173504 tcctcctcctcctccaccaccaccaccac 173532 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||| ||||||||||| Sbjct: 173535 cctccaccaccaccaccaccacct 173558
>gb|AC097143.9| Rattus norvegicus 4 BAC CH230-185G5 (Children's Hospital Oakland Research Institute) complete sequence Length = 83848 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 75583 cctcctcctccaccaccaccaccaccacc 75555 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||| || ||||||||||||||||||||| Sbjct: 75641 tcctccaccaccaccaccatcaccaccacct 75611 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| ||||| |||| Sbjct: 75646 cctcctcctccaccaccaccaccatcacc 75618 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||| |||||||||| Sbjct: 75613 cctcctcctccaccacctccaccaccacc 75585 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||| |||||||||| Sbjct: 75484 cctcctcctccaccacctccaccaccacc 75456 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 accaccatcaccaccacctacacca 85 |||||||||||||||||| |||||| Sbjct: 54538 accaccatcaccaccaccaacacca 54514
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 17379 cctcctcctccaccaccaccaccaccacc 17407 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17523 ccaccaccatcaccaccacc 17542 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17508 ccaccaccatcaccaccacc 17527 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17457 ccaccaccatcaccaccacc 17476 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17418 ccaccaccatcaccaccacc 17437 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17235 ccaccaccatcaccaccacc 17254 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17208 ccaccaccatcaccaccacc 17227 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17193 ccaccaccatcaccaccacc 17212 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17124 ccaccaccatcaccaccacc 17143 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17091 ccaccaccatcaccaccacc 17110 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17058 ccaccaccatcaccaccacc 17077 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17043 ccaccaccatcaccaccacc 17062 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 17019 ccaccaccatcaccaccacc 17038 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 16986 ccaccaccatcaccaccacc 17005 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 16938 ccaccaccatcaccaccacc 16957 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 16893 ccaccaccatcaccaccacc 16912 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 16878 ccaccaccatcaccaccacc 16897 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 16830 ccaccaccatcaccaccacc 16849
>gb|AC156980.9| Mus musculus chromosome 1, clone RP23-191A12, complete sequence Length = 224673 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcctcctcctcca 61 ||||||||||||||||||||||||| Sbjct: 94135 ctcccctcttcttcctcctcctcca 94111
>gb|AC159256.2| Mus musculus BAC clone RP24-109N11 from chromosome 13, complete sequence Length = 179979 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccaccatcaccacca 76 ||||| ||||||||||||| |||||||| |||||||| Sbjct: 104809 ccctcctcttcctcctccttcaccaccaccaccacca 104845
>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete sequence Length = 89779 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccac 74 ||||||||||||||||||||||||| Sbjct: 61452 cctcctcctccaccaccatcaccac 61476
>ref|XM_683771.1| PREDICTED: Danio rerio similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC560365), mRNA Length = 3675 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 60 caccaccatcaccaccacctacacc 84 ||||||||||||||||||||||||| Sbjct: 2062 caccaccatcaccaccacctacacc 2086
>gb|AC153142.3| Mus musculus BAC clone RP23-296H17 from chromosome 18, complete sequence Length = 212451 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccaccatcaccacca 76 |||||||| |||||||||||||||||| |||||||| Sbjct: 105671 ccctcttcctcctcctcctccaccacccccaccacca 105707 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| |||||| | |||||||| Sbjct: 105674 tcttcctcctcctcctccaccacccccaccacc 105706
>emb|CR352526.1| Gallus gallus finished cDNA, clone ChEST838h12 Length = 1241 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccac 77 ||||||| ||||||||||||||| ||| ||||||||| Sbjct: 402 cctcttcctcctcctcctccacctccaccaccaccac 438 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||| ||||| |||||||||| Sbjct: 404 tcttcctcctcctcctccacctccaccaccacc 436
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 23657869 cctcctcctccaccaccaccaccaccacc 23657897 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||||||||||| |||||| Sbjct: 19183553 cctccaccaccaccatcaccaccaccaacacca 19183585 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcctcctcc 57 ||||||||||||||||||||| Sbjct: 27835312 ctcccctcttcttcctcctcc 27835292 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 7230492 cctcctcctccacctccaccaccaccacc 7230464 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctcc 60 ||||||||||||||||||||| Sbjct: 728525 ccctcttcttcctcctcctcc 728505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatc 69 |||||||||||||||||||| Sbjct: 26789734 cctcctcctccaccaccatc 26789753 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cttcctcctcctccaccacc 66 |||||||||||||||||||| Sbjct: 5622870 cttcctcctcctccaccacc 5622851 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 tcccctcttcttcctcctcctcca 61 |||| ||||||||||||||||||| Sbjct: 178692 tcccttcttcttcctcctcctcca 178669
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 22796204 cctcctcctccaccaccaccaccaccacc 22796176 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 ctccaccaccatcaccaccacc 78 |||||||||||||||||||||| Sbjct: 25828801 ctccaccaccatcaccaccacc 25828780 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 39 cccctcttcttcctcctcctccaccaccat 68 ||||||||| ||||||||||||||| |||| Sbjct: 25611658 cccctcttcctcctcctcctccacctccat 25611629 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 26014584 cctcccctctccttcctcctcctcc 26014560 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcacca 73 ||||||||||||||||||| ||||| Sbjct: 10565262 tcctcctcctccaccaccaccacca 10565238 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 28777204 cctcttcttcctcctcctcc 28777223 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 25901569 ccaccaccatcaccaccacc 25901588 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcacc 72 ||||||||||||||||||| |||| Sbjct: 16840296 tcctcctcctccaccaccaccacc 16840273 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 |||||||||||| |||||| |||||||| Sbjct: 10565265 tcctcctcctcctccaccaccaccacca 10565238 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 |||||||||||| |||||| |||||||| Sbjct: 9846707 tcctcctcctccgccaccaccaccacca 9846680 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cttcttcctcctcctccacc 63 |||||||||||||||||||| Sbjct: 7000037 cttcttcctcctcctccacc 7000056
>emb|BX821354.1|CNS0A92H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZE04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 677 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccac 74 ||||||||||||||||||||||||| Sbjct: 227 cctcctcctccaccaccatcaccac 203
>gb|AC125611.4| Homo sapiens 12 BAC RP11-161H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194578 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 166863 cctcccctcttcttcctcctcctcc 166839
>gb|BT004078.1| Arabidopsis thaliana clone RAFL15-15-K12 (R20754) unknown protein (At2g30990) mRNA, complete cds Length = 554 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccac 74 ||||||||||||||||||||||||| Sbjct: 260 cctcctcctccaccaccatcaccac 236
>gb|BC045975.1| Danio rerio, clone IMAGE:5413379, mRNA Length = 2483 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccac 77 ||||||||||||||||||| ||||||||| Sbjct: 419 tcctcctcctccaccaccaccaccaccac 391 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 421 cctcctcctcctccaccaccaccaccacc 393
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 65465 cctcctcctccaccaccaccaccaccacc 65493
>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20 Length = 74452 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccaccatcaccacc 75 |||||||||||||| ||| |||||||||||||| Sbjct: 1140 tcttcttcctcctcttcctccaccatcaccacc 1108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 62426 cctcttcttcctcctcctcc 62445
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 115546 cctcctcctccaccaccaccaccaccacc 115518
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||||||||||| |||||| Sbjct: 105918 cctccaccaccaccatcaccaccaccaacacca 105950
>dbj|AK109528.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C04, full insert sequence Length = 1891 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 272 cctcctcctccaccaccaccaccaccacc 244
>dbj|AK069697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028J06, full insert sequence Length = 1641 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 150 cctcccctcttcttcctcctcctcc 126
>gb|AC161272.3| Mus musculus BAC clone RP23-56M19 from chromosome 9, complete sequence Length = 192003 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccac 77 ||||||||||||||||||| ||||||||| Sbjct: 52499 tcctcctcctccaccaccaccaccaccac 52527 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 34 cccctcccctcttcttcctcctcctcc 60 ||||||||||| ||||||||||||||| Sbjct: 135187 cccctcccctcctcttcctcctcctcc 135213 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 52496 tcctcctcctcctccaccaccaccaccacc 52525
>emb|AL844880.3|CNS08CB3 Oryza sativa chromosome 12, . BAC OSJNBb0049H14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120071 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 ||||||||||||||||||||||||| Sbjct: 66512 cctcccctcttcttcctcctcctcc 66536
>gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, complete sequence Length = 192877 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Minus Query: 42 ctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||||||||| | || |||||||||||||||||||| Sbjct: 141278 ctcttcttccttcaccaccaccaccatcaccaccacc 141242
>gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, complete sequence Length = 194101 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 35 ccctcccctcttcttcctcctcctc 59 ||||||||||||||||||||||||| Sbjct: 108594 ccctcccctcttcttcctcctcctc 108618 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 108538 cctcttcttcctcctcctcc 108557
>emb|AL603682.36| Mouse DNA sequence from clone RP23-235J5 on chromosome 11, complete sequence Length = 211680 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| |||||||||| Sbjct: 152632 cctcctcctccaccaccaccaccaccacc 152604 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 147933 ccaccaccatcaccaccacc 147952
>gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, complete sequence Length = 154808 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 70027 cctcccctcttcttcctcctcctc 70004
>gb|AC167245.2| Mus musculus BAC clone RP23-421F2 from chromosome 19, complete sequence Length = 198219 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 158420 tcctcctcctccaccaccaccaccacca 158393 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 158423 tcctcctcctcctccaccaccaccaccacc 158394
>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete sequence Length = 201050 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 46 tcttcctcctcctccaccaccatcaccaccac 77 |||||||| |||| |||||||||||||||||| Sbjct: 26534 tcttcctcttccttcaccaccatcaccaccac 26565
>ref|XM_472538.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1803 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 108 tcctcctcctccaccaccaccaccacca 135
>gb|AC117734.13| Mus musculus chromosome 1, clone RP24-130L9, complete sequence Length = 167235 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 58548 tcctcctcctccaccaccaccaccacca 58575 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 58546 cctcctcctcctccaccaccaccaccacc 58574
>gb|AC164422.2| Mus musculus chromosome 19, clone RP23-407G6, complete sequence Length = 212046 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 152030 tcctcctcctccaccaccaccaccacca 152003 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 152033 tcctcctcctcctccaccaccaccaccacc 152004
>gb|AC123662.13| Mus musculus chromosome 5, clone RP23-213N8, complete sequence Length = 223267 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccacca 76 |||||||||||||||||| ||||| || |||||||| Sbjct: 117709 cctcttcttcctcctccttcaccaacaccaccacca 117744
>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence Length = 157478 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 5846 cctcccctcttcttcctcctcctc 5869
>gb|AC139636.12| Mus musculus chromosome 5, clone RP24-182D2, complete sequence Length = 172097 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccacca 76 |||| ||||||||||||||| || |||||||||||| Sbjct: 149690 cctcctcttcctcctcctcctcctccatcaccacca 149725
>gb|AC116798.11| Mus musculus chromosome 1, clone RP24-329K22, complete sequence Length = 173479 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||| |||||||||||||||||| Sbjct: 10188 tcctcctccaccaccaccatcaccacca 10215 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| || ||||||| Sbjct: 10186 cctcctcctccaccaccaccatcaccacc 10214
>gb|AC183804.3| Pan troglodytes BAC clone CH251-67P16 from chromosome 2, complete sequence Length = 169437 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacaccaa 86 |||||||||||||||||||| ||||||| Sbjct: 108943 ccaccaccatcaccaccaccaacaccaa 108916
>ref|XM_951647.1| Neurospora crassa OR74A hypothetical protein (NCU01463.1) partial mRNA Length = 1278 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 969 tcctcctcctccaccaccaccaccacca 996 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 966 tcctcctcctcctccaccaccaccaccacc 995
>gb|AC120006.12| Mus musculus chromosome 19, clone RP24-176M2, complete sequence Length = 181007 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 65070 tcctcctcctccaccaccaccaccacca 65043 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 65073 tcctcctcctcctccaccaccaccaccacc 65044
>ref|XM_327901.1| Neurospora crassa OR74A hypothetical protein (NCU01463.1) partial mRNA Length = 1278 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 969 tcctcctcctccaccaccaccaccacca 996 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 966 tcctcctcctcctccaccaccaccaccacc 995
>ref|NM_001030661.1| Gallus gallus SET domain containing 1B (SETD1B), mRNA Length = 6313 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccacca 67 ||||| |||||||||||||||||||||| Sbjct: 2153 ccctcctcttcctcctcctccaccacca 2180
>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence Length = 193068 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccac 77 |||||||| |||| |||||||||||||||||| Sbjct: 81685 tcttcctcttccttcaccaccatcaccaccac 81654
>gb|AC138109.3| Mus musculus BAC clone RP24-444I15 from chromosome 1, complete sequence Length = 209820 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||| |||||||||||||||||| Sbjct: 161033 tcctcctccaccaccaccatcaccacca 161060 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||| || ||||||| Sbjct: 161031 cctcctcctccaccaccaccatcaccacc 161059
>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence Length = 235471 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||| ||||||||||| ||||| Sbjct: 169937 cctccacctccaccaccaccaccaccacctccacca 169902 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 170030 cctccaccaccaccatcaccaccacc 170005 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 169775 cctccaccaccaccatcaccaccacc 169750 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 169628 cctccaccaccaccatcaccaccacc 169603 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||| |||||||||||| |||||||||| Sbjct: 169685 cctccacctccaccaccaccaccaccacc 169657
>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence Length = 189100 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 23033 cctcccctcttcttcctcctcctc 23056
>gb|AC153608.10| Mus musculus 6 BAC RP23-79A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188294 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 40322 tcctcctcctccaccaccaccaccacca 40295
>gb|AC140781.3| Mus musculus BAC clone RP24-497M1 from chromosome 19, complete sequence Length = 131111 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacctacacc 84 ||||||||||||||||||| |||| |||||| |||| Sbjct: 117834 tcctcctcctccaccaccaccacctccacctccacc 117869 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacctacacc 84 |||||||||||| || ||| ||||||||||| |||| Sbjct: 117828 tcctcctcctcctcctccaccaccaccacctccacc 117863
>gb|AC138591.10| Mus musculus chromosome 3, clone RP24-224A19, complete sequence Length = 147525 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 39 cccctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||| || |||||| |||||||||||| |||||||||| Sbjct: 40725 cccctcctcctcctccacctccaccaccaccaccaccacc 40764
>emb|AL353779.11| Human DNA sequence from clone RP1-43O17 on chromosome 1 Contains the LEP7 gene for late envelope protein 7, two small proline rich-like (epidermal differentiation complex) 1B (SPRL1B) pseudogenes, the gene for a novel protein, the LEP6 gene for late envelope protein 6, the LEP5 gene for late envelope protein 5, the LEP4 gene for late envelope protein 4 and the LEP3 gene for late envelope protein 3, complete sequence Length = 96013 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcctcctcctcc 60 |||||||||||||||||||||||| Sbjct: 40336 ctcccctcttcttcctcctcctcc 40359
>emb|AL161723.12| Human DNA sequence from clone RP13-172P13 on chromosome X, complete sequence Length = 155725 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 140820 tcctcctcctccaccaccaccaccacca 140847
>emb|AL133479.11| Human DNA sequence from clone RP11-299F23 on chromosome 9p23-24.3, complete sequence Length = 167497 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 40990 cctcccctcttcttcctcctcctc 41013
>emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig B11E5 Length = 191196 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 7239 tcctcctcctccaccaccaccaccacca 7212 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 7242 tcctcctcctcctccaccaccaccaccacc 7213
>gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome 17, complete sequence Length = 252045 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcaccaccacctacacca 85 ||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 79453 tcttcctcctcctcctacaccaccaccaccacctccacca 79414 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||||| |||| ||||| Sbjct: 79352 tcctcctcctccaccaccaccacctccacc 79323 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 79381 ccaccaccatcaccaccacc 79362
>emb|BX294022.1|NCB11C21 Neurospora crassa DNA linkage group V BAC clone B11C21 Length = 62209 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 4393 tcctcctcctccaccaccaccaccacca 4420 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 4390 tcctcctcctcctccaccaccaccaccacc 4419
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 130289 tcctcctcctccaccaccaccaccacca 130316
>emb|AJ851602.1| Gallus gallus mRNA for hypothetical protein, clone 10j6 Length = 6313 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccacca 67 ||||| |||||||||||||||||||||| Sbjct: 2153 ccctcctcttcctcctcctccaccacca 2180
>gb|AC164631.5| Mus musculus 6 BAC RP23-359M3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 237469 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacaccaa 86 ||||||||||||||||||||| |||||| Sbjct: 34809 ccaccaccatcaccaccacctccaccaa 34782
>emb|AL731866.8| Mouse DNA sequence from clone RP23-37F22 on chromosome 11 Contains the 5' end of a variant of the Ccl1 gene for chemokine (C-C motif) ligand 1, complete sequence Length = 105085 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcctcctcctcc 60 |||||||||||||||||||||||| Sbjct: 67866 ctcccctcttcttcctcctcctcc 67843 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 35899 cctcttcttcctcctcctcc 35918
>gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, complete sequence Length = 148045 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacct 79 |||||||||||||||||||||||| Sbjct: 142143 cctccaccaccatcaccaccacct 142120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccacca 76 ||||||||||||||||||||| Sbjct: 141115 cctccaccaccatcaccacca 141095 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 141397 ccaccaccatcaccaccacc 141378 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 141202 ccaccaccatcaccaccacc 141183
>ref|XM_679244.1| PREDICTED: Danio rerio similar to 5-hydroxytryptamine 1D receptor (LOC556429), mRNA Length = 1161 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccac 77 |||||||||||||||||| ||||||||| Sbjct: 836 cctcctcctccaccaccaccaccaccac 809
>gb|AC009535.9| Drosophila melanogaster, chromosome 2R, region 54B-54B, BAC clone BACR28O12, complete sequence Length = 161244 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccacc 78 ||||||| |||||||||||||||||||| Sbjct: 65848 ctcctccaccaccaccatcaccaccacc 65875
>dbj|AK034020.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330141K23 product:RIKEN cDNA 2210010N04 gene, full insert sequence Length = 2745 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccacca 76 |||| ||||||||||||||| || |||||||||||| Sbjct: 863 cctcctcttcctcctcctcctcctccatcaccacca 898
>emb|CR377979.1| Pinus pinaster SSR, clone PPB3E09 Length = 624 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 509 tcctcctcctccaccaccaccaccacca 536
>emb|CR377919.1| Pinus pinaster SSR, clone PPB4A07r Length = 208 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 69 tcctcctcctccaccaccaccaccacca 42
>emb|CR377918.1| Pinus pinaster SSR, clone PPB4A07 Length = 560 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 472 tcctcctcctccaccaccaccaccacca 499
>emb|CR354521.1| Pinus pinaster SSR, clone PPA5F12 Length = 226 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 98 tcctcctcctccaccaccaccaccacca 71
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 3225850 tcctcctcctccaccaccaccaccacca 3225877 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||| |||||||||||| |||||||||| Sbjct: 2323882 tcctccgcctccaccaccaccaccaccacc 2323911 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcacca 73 ||||||||||||||||||| ||||| Sbjct: 30027654 tcctcctcctccaccaccaccacca 30027630 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 |||| |||||||||||||||||||| Sbjct: 24355002 cctctcctcttcttcctcctcctcc 24355026 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||| |||||||||||| |||||||||| Sbjct: 21701188 cctccgcctccaccaccaccaccaccacc 21701216 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 32 aacccctcccctcttcttcctcctcctcc 60 ||||||||||||| || |||||||||||| Sbjct: 19619117 aacccctcccctcctcctcctcctcctcc 19619089 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctcc 60 ||||||||||||||||||||| Sbjct: 19349415 ccctcttcttcctcctcctcc 19349395 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccat 68 ||||||||||||||||||||| Sbjct: 14127060 ttcctcctcctccaccaccat 14127080 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 7674684 cctcctcctccacctccaccaccaccacc 7674656 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 24409 cctcctcctccacctccaccaccaccacc 24437 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 35 ccctcccctcttcttcctcctcctccaccacc 66 |||||||||| || |||||||||||| ||||| Sbjct: 35141497 ccctcccctcctcctcctcctcctcctccacc 35141466 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||| ||||||||||||| Sbjct: 33632677 cctcccctctccttcctcctcctc 33632654 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 |||||||||||| |||||| |||||||| Sbjct: 30027657 tcctcctcctcctccaccaccaccacca 30027630 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccac 65 |||||||||||||||||||| Sbjct: 25809273 tcttcctcctcctccaccac 25809254 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||| ||| |||||||| Sbjct: 23811848 tcctcctcctccaccgccaccaccacca 23811821 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacca 73 |||||||||||||||||| ||||| Sbjct: 22703456 cctcctcctccaccaccaccacca 22703479
>gb|AC156394.6| Mus musculus 6 BAC RP24-314D22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171323 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacctacaccaa 86 ||||||||||||||||||||| |||||| Sbjct: 17684 ccaccaccatcaccaccacctccaccaa 17711
>gb|AC037423.16|AC037423 Homo sapiens chromosome 9 clone RP11-287F15, complete sequence Length = 171029 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 106194 cctcccctcttcttcctcctcctc 106217
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccacc 78 ||||||||||||||||| |||||||||| Sbjct: 116708 ctcctcctccaccaccaccaccaccacc 116735 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 122797 ccaccaccatcaccaccacc 122778
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 39 cccctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||| || |||||| |||||||||||| |||||||||| Sbjct: 138469 cccctcctcctcctccacctccaccaccaccaccaccacc 138430
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 39 cccctcttcttcctcctcctccaccaccatcaccaccacc 78 |||||| || |||||| |||||||||||| |||||||||| Sbjct: 18726 cccctcctcctcctccacctccaccaccaccaccaccacc 18687
>gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, complete sequence Length = 159667 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccacc 66 |||||||||||||||||||||||| Sbjct: 138717 tcttcttcctcctcctccaccacc 138694
>gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, complete sequence Length = 169610 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 43 tcttcttcctcctcctccaccacc 66 |||||||||||||||||||||||| Sbjct: 152553 tcttcttcctcctcctccaccacc 152576 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 33646 ccaccaccatcaccaccacc 33665
>gb|AE003803.4| Drosophila melanogaster chromosome 2R, section 47 of 73 of the complete sequence Length = 290783 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccacc 78 ||||||| |||||||||||||||||||| Sbjct: 85866 ctcctccaccaccaccatcaccaccacc 85893
>emb|AL929068.20| Mouse DNA sequence from clone RP23-9N11 on chromosome 2, complete sequence Length = 131152 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||||||||||| |||||||| Sbjct: 63540 tcctcctcctccaccaccaccaccacca 63513 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacc 78 |||||||||||| |||||| |||||||||| Sbjct: 63543 tcctcctcctcctccaccaccaccaccacc 63514
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence Length = 207210 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacctacacca 85 ||||| |||||||||||| ||||||||||| ||||| Sbjct: 12328 cctccacctccaccaccaccaccaccacctccacca 12293 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 12421 cctccaccaccaccatcaccaccacc 12396 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 12166 cctccaccaccaccatcaccaccacc 12141 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 53 cctcctccaccaccatcaccaccacc 78 ||||| |||||||||||||||||||| Sbjct: 12019 cctccaccaccaccatcaccaccacc 11994 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||| |||||||||||| |||||||||| Sbjct: 12076 cctccacctccaccaccaccaccaccacc 12048
>emb|AL772216.15| Mouse DNA sequence from clone RP23-153M22 on chromosome 2, complete sequence Length = 212233 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 43 tcttcttcctcctcctccaccaccatcaccac 74 ||||||||||||||| || ||||||||||||| Sbjct: 111413 tcttcttcctcctccacctccaccatcaccac 111444 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 172994 ccaccaccatcaccaccacc 173013
>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144767 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 48 ttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||||| ||||||| Sbjct: 50675 ttcctcctcctccaccaccaccaccacc 50648 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 tcctcctccaccaccatcaccaccacct 79 ||||||||| |||||| ||||||||||| Sbjct: 50674 tcctcctcctccaccaccaccaccacct 50647
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 48 ttcctcctcctccaccaccatcaccacc 75 |||||||||||||||||||| ||||||| Sbjct: 164888 ttcctcctcctccaccaccaccaccacc 164861 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 tcctcctccaccaccatcaccaccacct 79 ||||||||| |||||| ||||||||||| Sbjct: 164887 tcctcctcctccaccaccaccaccacct 164860
>emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in linkage group 17, complete sequence Length = 193168 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccac 77 |||||||||||||||||| ||||||||| Sbjct: 181561 cctcctcctccaccaccaccaccaccac 181588
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccacca 76 |||| ||||||||||||||| || |||||||||||| Sbjct: 43923 cctcctcttcctcctcctcctcctccatcaccacca 43958
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacca 76 ||||||||||| |||||||||||||||| Sbjct: 178605 tcctcctcctctaccaccatcaccacca 178632
>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete sequence Length = 224038 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctc 59 |||||||||||||||||||||||| Sbjct: 206562 cctcccctcttcttcctcctcctc 206539
>emb|AL607123.22| Mouse DNA sequence from clone RP23-391E6 on chromosome 4, complete sequence Length = 149369 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 37 ctcccctcttcttcctcctcctcc 60 |||||||||||||||||||||||| Sbjct: 136888 ctcccctcttcttcctcctcctcc 136865
>emb|AL713840.1|CNS07YOU Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6) clone 425A1 of library Caltech CITB-BAC from chromosome 11 of Mus musculus (mouse) Length = 128620 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 37 ctcccctcttcttcctcctcctcc 60 |||||||||||||||||||||||| Sbjct: 69557 ctcccctcttcttcctcctcctcc 69580 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 101525 cctcttcttcctcctcctcc 101506
>gb|AC102156.16| Mus musculus chromosome 18, clone RP23-334L7, complete sequence Length = 221632 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||||||| ||||||| Sbjct: 37031 tcctcctccaccaccaccatcactaccacct 37001
>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence Length = 189760 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 34 cccctcccctcttcttcctcctcctcc 60 ||||||||||| ||||||||||||||| Sbjct: 172802 cccctcccctcctcttcctcctcctcc 172776
>ref|XM_512394.1| PREDICTED: Pan troglodytes similar to protein kinase C substrate 80K-H isoform 1; glucosidase II, beta subunit; AGE-binding receptor 2; hepatocystin; 80K-H protein; protein kinase C substrate, 80 Kda protein (LOC455731), mRNA Length = 2411 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccacca 67 |||||||||||||||||||| |||||| Sbjct: 1438 cctcttcttcctcctcctcctccacca 1412 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 tcttcttcctcctcctccaccacc 66 ||||| |||||||||||||||||| Sbjct: 1433 tcttcctcctcctcctccaccacc 1410
>gb|BC067309.1| Xenopus tropicalis Wiskott-Aldrich syndrome-like, mRNA (cDNA clone MGC:75618 IMAGE:5379332), complete cds Length = 2227 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccaccacct 79 ||||||||||||||| ||||||||||| Sbjct: 1244 cctcctccaccaccaccaccaccacct 1270
>gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, complete sequence Length = 40686 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacc 72 ||||||||||||||||||||||| Sbjct: 2424 cctcctcctccaccaccatcacc 2446 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 1357 cctcttcttcctcctcctcc 1376
>ref|XM_519296.1| PREDICTED: Pan troglodytes similar to serine kinase SRPK2-alternatively spliced form; similar to U88666 (PID:g1857944); alternatively spliced form of H_RG152G17.1a (LOC463641), mRNA Length = 2937 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||| ||| |||||||||| Sbjct: 383 ttcctcctcctccaccgccaccaccaccacc 413
>ref|XM_468819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 27 cctccaccaccatcaccaccacc 49
>gb|AC109149.15| Mus musculus chromosome 19, clone RP24-178F17, complete sequence Length = 176668 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccacc 75 ||||||| |||||| || ||||||||||||||||| Sbjct: 4575 cctcttcctcctccaccaccaccaccatcaccacc 4609 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacct 79 |||| |||||||||||| ||||||||| || |||||||| Sbjct: 4572 cctcctcttcctcctccaccaccaccaccatcaccacct 4610
>ref|NM_133199.1| Mus musculus sodium channel, voltage-gated, type IV, alpha polypeptide (Scn4a), mRNA Length = 5887 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 51 ctcctcctccaccaccatcaccaccac 77 |||||||||||||| |||||||||||| Sbjct: 5457 ctcctcctccaccatcatcaccaccac 5483
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 392181 tcctcctcctccaccaccaccaccacc 392207 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 392179 cctcctcctcctccaccaccaccaccacc 392207 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 2055469 cctcttcttcctcctcctcc 2055488 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 2055451 cctcttcttcctcctcctcc 2055470
>gb|AF121781.1| Homo sapiens chromosome 21q22.3 PAC 1031P17, complete sequence, containing part of SH3BGR gene and an unknown gene Length = 89421 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacctacaccaa 86 ||||||| ||||||||||||||| ||||||| Sbjct: 74332 cctccactaccatcaccaccaccaacaccaa 74302 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 74224 ccaccaccatcaccaccacc 74205
>gb|AY370641.1| Pisum sativum cultivar JI-171 "Ethiopia" Sat5 gene, partial cds Length = 193 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 54 ctcctccaccaccatcaccacca 76 ||||||||||||||||||||||| Sbjct: 152 ctcctccaccaccatcaccacca 174
>gb|AC102873.10| Mus musculus chromosome 17, clone RP24-536C15, complete sequence Length = 155210 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 53673 tcctcctcctccaccaccaccaccacc 53699 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||| |||||| ||||||||||| Sbjct: 53670 tcctcctcctcctccaccaccaccaccacct 53700
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 34 cccctcccctcttcttcctcctcctcc 60 |||||||||||||| |||||||||||| Sbjct: 144818 cccctcccctcttcctcctcctcctcc 144844 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 25563 ccaccaccatcaccaccacc 25582
>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence Length = 194427 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccacca 76 |||||||||||||||||| |||||||| Sbjct: 66388 cctcctcctccaccaccaccaccacca 66414 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 66364 ccaccaccatcaccaccacc 66383 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 66352 ccaccaccatcaccaccacc 66371
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||| |||||||||||| ||||||||||| Sbjct: 93220 tcctccacctccaccaccaccaccaccacct 93250 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 |||||||||||||| ||| |||||||||| Sbjct: 93215 cctcctcctccacctccaccaccaccacc 93243
>gb|BC081878.1| Rattus norvegicus heterogeneous nuclear ribonucleoprotein A3, mRNA (cDNA clone MGC:93744 IMAGE:7108128), complete cds Length = 2608 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||||| ||||||||| Sbjct: 947 tcctcctcctccaccaccatatccaccacct 917
>ref|XM_425138.1| PREDICTED: Gallus gallus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC427565), mRNA Length = 4500 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccacc 63 ||||||||||||||||||||||| Sbjct: 1837 cctcttcttcctcctcctccacc 1815 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 1867 cctcttcttcctcctcctcc 1848
>gb|AC107316.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-258F1, complete sequence Length = 118461 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||| ||||| Sbjct: 109461 ccaccaccatcaccaccacctccacca 109435
>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete sequence Length = 199642 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||| ||||| Sbjct: 14333 ccaccaccatcaccaccacctccacca 14307
>gb|AC137969.9| Mus musculus chromosome 7, clone RP23-267N11, complete sequence Length = 176711 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 40 ccctcttcttcctcctcctccaccaccatcaccaccacc 78 ||||| || ||||||||||| ||||||| |||||||||| Sbjct: 110417 ccctcctcctcctcctcctctaccaccaccaccaccacc 110455
>gb|AC140300.3| Mus musculus BAC clone RP23-373O10 from chromosome 17, complete sequence Length = 189769 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 34 cccctcccctcttcttcctcctc 56 ||||||||||||||||||||||| Sbjct: 52069 cccctcccctcttcttcctcctc 52047
>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence Length = 99811 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||| |||||||||||| ||||||||||| Sbjct: 93380 tcctccacctccaccaccaccaccaccacct 93410
>gb|AC141888.4| Mus musculus BAC clone RP23-462H3 from chromosome 19, complete sequence Length = 185192 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 34 cccctcccctcttcttcctcctcctcc 60 ||||| ||||||||||||||||||||| Sbjct: 104127 ccccttccctcttcttcctcctcctcc 104101
>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete sequence Length = 202525 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcct 58 ||||||||||||||||||||||| Sbjct: 73279 cctcccctcttcttcctcctcct 73257 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctc 56 ||||||||||||||||||||| Sbjct: 154142 cctcccctcttcttcctcctc 154122
>ref|NM_011642.1| Mus musculus transformation related protein 73 (Trp73), mRNA Length = 2452 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctccacc 63 ||||||||||||||||||||||| Sbjct: 420 cctcttcttcctcctcctccacc 442
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 344683 tcctcctcctccaccaccaccaccacc 344709 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacctacacc 84 ||||||||||| |||||| ||||||||||| |||| Sbjct: 344681 cctcctcctcctccaccaccaccaccacctccacc 344715
>gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, complete sequence Length = 198984 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||| ||||||||||||| ||||||| Sbjct: 12744 tcctcctccaccaccaccatcactaccacct 12774
>gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, complete sequence Length = 247962 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 ||||||||||||||||||| ||| ||||||| Sbjct: 95457 tcctcctcctccaccaccaccactaccacct 95487 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 56999 cctcttcttcctcctcctcc 56980
>gb|AY442259.1| Populus alba x Populus tremula clone cET-1-pop1-506 predicted protein mRNA, complete cds Length = 2450 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccacc 75 ||||||||||||||||||||||| Sbjct: 413 cctcctccaccaccatcaccacc 435
>gb|BC098601.1| Danio rerio U2(RNU2) small nuclear RNA auxiliary factor 1, mRNA (cDNA clone MGC:111896 IMAGE:7435352), complete cds Length = 994 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 46 tcttcctcctcctccaccaccatcacc 72 |||||||||||||||||||||| |||| Sbjct: 730 tcttcctcctcctccaccaccaccacc 704
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacc 72 ||||||||||||||||||||||| Sbjct: 183281 cctcctcctccaccaccatcacc 183303 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 182214 cctcttcttcctcctcctcc 182233 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 55257 cctcttcttcctcctcctcc 55276
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 18052760 cctccaccaccatcaccaccacc 18052738 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 ctccaccaccatcaccaccacc 78 |||||||||||||||||||||| Sbjct: 24742322 ctccaccaccatcaccaccacc 24742301 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 44 cttcttcctcctcctccaccaccatcaccaccac 77 ||||||||||| || ||||||||| ||||||||| Sbjct: 10521205 cttcttcctccaccaccaccaccaccaccaccac 10521172 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 31431123 cctcccctctccttcctcctcctcc 31431147 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcacca 73 ||||||||||||||||||| ||||| Sbjct: 31250384 tcctcctcctccaccaccaccacca 31250408 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcctcc 60 |||||||||| |||||||||||||| Sbjct: 14421059 cctcccctctccttcctcctcctcc 14421035 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcacca 73 ||||||||||||||||||| ||||| Sbjct: 2034259 tcctcctcctccaccaccaccacca 2034235 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctc 59 |||||||||||||||||||| Sbjct: 35126572 ccctcttcttcctcctcctc 35126553 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 31630676 cctcttcttcctcctcctcc 31630657 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccacca 76 |||||||||||||| ||||||||| Sbjct: 29886827 cctcctccaccaccgtcaccacca 29886850 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 18268190 cctcttcttcctcctcctcc 18268209 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 12536706 cctcttcttcctcctcctcc 12536725 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 tcctccaccaccatcaccaccacc 78 ||||||||||||| |||||||||| Sbjct: 10521200 tcctccaccaccaccaccaccacc 10521177 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacca 76 |||||||||||| |||||| |||||||| Sbjct: 2034262 tcctcctcctcctccaccaccaccacca 2034235
>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete sequence Length = 131589 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 63441 cctccaccaccatcaccaccacc 63463
>ref|XR_003089.1| PREDICTED: Mus musculus hypothetical LOC625989 (LOC625989), mRNA Length = 1200 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||||||||||| ||||||||| Sbjct: 600 tcctcctcctccaccaccatatccaccacct 570
>ref|XM_754769.1| Ustilago maydis 521 hypothetical protein (UM03715.1) partial mRNA Length = 3429 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 313 tcctcctcctccaccaccaccaccacc 339 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcaccaccacct 79 |||||||||||| |||||| ||||||||||| Sbjct: 310 tcctcctcctcctccaccaccaccaccacct 340
>ref|XM_822158.1| Trypanosoma brucei TREU927 hypothetical protein (Tb09.211.1070) partial mRNA Length = 3093 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacctacacca 85 ||||||||||||||||||| ||||||| Sbjct: 1560 ccaccaccatcaccaccacatacacca 1586
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 43694 cctccaccaccatcaccaccacc 43672 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 cctcctccaccaccatcaccacca 76 |||| ||||||||||||||||||| Sbjct: 66969 cctcatccaccaccatcaccacca 66992
>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8, complete sequence Length = 173122 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctccaccacc 66 ||||||||||||||||||||| ||||| Sbjct: 87591 ccctcttcttcctcctcctcctccacc 87565
>ref|XM_384256.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04080.1) partial mRNA Length = 1440 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||| ||||| Sbjct: 49 ccaccaccatcaccaccaccttcacca 75
>ref|XM_569471.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNC01430) partial mRNA Length = 2193 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 49 tcctcctcctccaccaccatcaccacc 75 ||||||||||||||||||| ||||||| Sbjct: 2132 tcctcctcctccaccaccaccaccacc 2106 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||||||||| |||||| |||||||||| Sbjct: 2134 cctcctcctcctccaccaccaccaccacc 2106
>gb|BC062941.1| Mus musculus serine/arginine-rich protein specific kinase 2, mRNA (cDNA clone IMAGE:6842723), complete cds Length = 4287 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 48 ttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||||| |||| ||||| Sbjct: 220 ttcctcctcctccaccaccaccaccgccacc 250
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 36 cctcccctcttcttcctcctcct 58 ||||||||||||||||||||||| Sbjct: 90176 cctcccctcttcttcctcctcct 90154
>gb|AC122184.4| Mus musculus BAC clone RP23-16C12 from chromosome 7, complete sequence Length = 222122 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacacca 85 |||||||||||||||||||| |||||| Sbjct: 218776 ccaccaccatcaccaccaccaacacca 218750 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 218818 ccaccaccatcaccaccacc 218799 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 218707 ccaccaccatcaccaccacc 218688
>gb|AC122809.4| Mus musculus BAC clone RP23-272E5 from chromosome 7, complete sequence Length = 205725 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacctacacca 85 |||||||||||||||||||| |||||| Sbjct: 145988 ccaccaccatcaccaccaccaacacca 146014 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 146057 ccaccaccatcaccaccacc 146076 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 145946 ccaccaccatcaccaccacc 145965
>gb|AC130538.4| Mus musculus BAC clone RP23-450E2 from chromosome 7, complete sequence Length = 169082 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 cctccaccaccatcaccaccacc 78 ||||||||||||||||||||||| Sbjct: 63359 cctccaccaccatcaccaccacc 63337 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacctacacca 85 ||||||||||||||||||||| ||||| Sbjct: 63329 ccaccaccatcaccaccacctccacca 63303 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ccaccaccatcaccaccacc 78 |||||||||||||||||||| Sbjct: 63410 ccaccaccatcaccaccacc 63391 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccctcttcttcctcctcctc 59 |||||||||||||||||||| Sbjct: 52385 ccctcttcttcctcctcctc 52366
>gb|AC110212.12| Mus musculus chromosome 19, clone RP23-183H23, complete sequence Length = 212687 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccacc 75 ||||||| |||||| || ||||||||||||||||| Sbjct: 85894 cctcttcctcctccaccaccaccaccatcaccacc 85860 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 41 cctcttcttcctcctcctccaccaccatcaccaccacct 79 |||| |||||||||||| ||||||||| || |||||||| Sbjct: 85897 cctcctcttcctcctccaccaccaccaccatcaccacct 85859
>gb|AC122022.4| Mus musculus BAC clone RP24-372J5 from chromosome 5, complete sequence Length = 174861 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 48 ttcctcctcctccaccaccatcaccaccacc 78 |||||||||||||||||||| |||| ||||| Sbjct: 144664 ttcctcctcctccaccaccaccaccgccacc 144634
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcacc 72 ||||||||||||||||||||||| Sbjct: 160934 cctcctcctccaccaccatcacc 160956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 159867 cctcttcttcctcctcctcc 159886 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cctcttcttcctcctcctcc 60 |||||||||||||||||||| Sbjct: 32908 cctcttcttcctcctcctcc 32927
>gb|AC121809.3| Mus musculus BAC clone RP23-451B23 from chromosome 8, complete sequence Length = 192626 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacctacacc 84 ||||| |||||||||||| ||||||||||| |||| Sbjct: 123494 cctccacctccaccaccaccaccaccacctccacc 123528 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||| |||||||||||| |||||||||| Sbjct: 123551 cctccacctccaccaccaccaccaccacc 123579 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 50 cctcctcctccaccaccatcaccaccacc 78 ||||| |||||||||||| |||||||||| Sbjct: 123428 cctccacctccaccaccaccaccaccacc 123456 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 tcctcctcctccaccaccatcacc 72 ||||||||||| |||||||||||| Sbjct: 123649 tcctcctcctctaccaccatcacc 123672 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,071,733 Number of Sequences: 3902068 Number of extensions: 6071733 Number of successful extensions: 316016 Number of sequences better than 10.0: 5332 Number of HSP's better than 10.0 without gapping: 5401 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 261230 Number of HSP's gapped (non-prelim): 53803 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)