>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
 Frame = -1

Query: 91  RARPPRPDP---------HG-HGAAWSGRTPWHPDPGTK 5
           R +PP PDP         HG H AA +GR P  P PG++
Sbjct: 651 RRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSE 689

>SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1079

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 79  PRPDPHGHGAAWSGRTPWHPDPGTKQ 2
           P P P G+G   + +TP +PDP + Q
Sbjct: 836 PTPSPQGYGGTPNPQTPGYPDPSSPQ 861

>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 79  PRPDPHGHGAAWSGRTPWHPDP 14
           PRP P G G  WS R P  P P
Sbjct: 107 PRPPPPGPGPPWSPRWPEAPPP 128

>GLUQ_NEIMA (Q9JST9) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 295

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
 Frame = -1

Query: 127 EWRRPAAR-------SGRCRARPPRPDPHGHGAAWSGRTP 29
           +W+  A R       +GRCR    RP P G   AW  R P
Sbjct: 103 DWQTGARRGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVP 142

>SPT5H_HUMAN (O00267) Transcription elongation factor SPT5 (hSPT5) (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit) (DSIF p160) (Tat-cotransactivator 1 protein)
           (Tat-CT1 protein)
          Length = 1087

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 79  PRPDPHGHGAAWSGRTPWHPDPGTKQ 2
           P P P  +G   + +TP +PDP + Q
Sbjct: 844 PTPSPQAYGGTPNPQTPGYPDPSSPQ 869

>SPT5H_PONPY (Q5R405) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1083

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 79  PRPDPHGHGAAWSGRTPWHPDPGTKQ 2
           P P P  +G   + +TP +PDP + Q
Sbjct: 840 PTPSPQAYGGTPNPQTPGYPDPSSPQ 865

>SPT5H_MOUSE (O55201) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1082

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 79  PRPDPHGHGAAWSGRTPWHPDPGTKQ 2
           P P P  +G   + +TP +PDP + Q
Sbjct: 838 PTPSPQAYGGTPNPQTPGYPDPSSPQ 863

>SPP2_ASHGO (Q753C4) Pre-mRNA-splicing factor SPP2|
          Length = 207

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 96  AAERDRRVLIPTATGQLGVAAPHGTQTQAPS 4
           AA+  RRV++P  +G+  +  P     Q PS
Sbjct: 50  AAKAKRRVIVPACSGRASIVPPKFASEQGPS 80

>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)|
          Length = 646

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -1

Query: 130 DEWRRPAARSGRCRARPPRPDPHGHGAAWSGRTP 29
           +E R    R G    RPP P P G   +  GR P
Sbjct: 600 EEGRSTRGRGGESPPRPPLPSPPGSRGSGLGRLP 633


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,474,310
Number of Sequences: 219361
Number of extensions: 358239
Number of successful extensions: 1793
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)