ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14h05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 180 bits (457), Expect = 6e-46 Identities = 91/92 (98%), Positives = 91/92 (98%) Frame = +2 Query: 110 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISST 289 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGV CQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 290 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 92
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 155 bits (391), Expect = 3e-38 Identities = 76/92 (82%), Positives = 86/92 (93%), Gaps = 1/92 (1%) Frame = +2 Query: 113 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTA 292 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGV CQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 293 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGE 385 VD +NG RGKVGAEA LEQW+T SLPSLTTGE Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGE 92
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 139 bits (350), Expect = 2e-33 Identities = 67/91 (73%), Positives = 80/91 (87%) Frame = +2 Query: 113 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTA 292 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GV CQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 293 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 VD +NG RG+VG EA LEQW+TSLPSLTTGE Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGE 90
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 95.9 bits (237), Expect = 2e-20 Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 3/94 (3%) Frame = +2 Query: 113 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLIS 283 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG + +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 284 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 S D +NG +GK+G A LE W+T++ SLT GE Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGE 94
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 94.0 bits (232), Expect = 8e-20 Identities = 46/91 (50%), Positives = 64/91 (70%) Frame = +2 Query: 113 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTA 292 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G + CQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 293 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 DQ+N GRG VG+EA LEQ +T LPS++ GE Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGE 90
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 86.7 bits (213), Expect = 1e-17 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 6/98 (6%) Frame = +2 Query: 110 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVAC 271 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GVA Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 272 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 +L+S+TA D NGGRGK+G A LE+ V ++ S GE Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGE 98
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 80.5 bits (197), Expect = 9e-16 Identities = 41/92 (44%), Positives = 62/92 (67%) Frame = +2 Query: 110 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISST 289 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 290 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 +V+ D G GK+ A LE W+T + +T GE Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGE 90
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 68.9 bits (167), Expect = 3e-12 Identities = 41/91 (45%), Positives = 55/91 (60%) Frame = +2 Query: 113 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTA 292 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 293 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 D NG +GK A LE ++ +L L GE Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGE 92
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 67.4 bits (163), Expect = 8e-12 Identities = 44/97 (45%), Positives = 55/97 (56%), Gaps = 18/97 (18%) Frame = +2 Query: 149 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVACQ 274 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 275 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 LIS+T D G+GKVG + LE + SLP+L GE Sbjct: 70 LISAT--KSDANGKGKVGKDTFLEGVLASLPTLGAGE 104
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 64.3 bits (155), Expect = 7e-11 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 13/92 (14%) Frame = +2 Query: 149 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVACQLISST 289 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 290 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 D G+GK+G LE ++SLP+L G+ Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQ 99
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 64.3 bits (155), Expect = 7e-11 Identities = 37/75 (49%), Positives = 50/75 (66%) Frame = +2 Query: 161 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTAVDQDNGGRGKVGAEAE 340 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 341 LEQWVTSLPSLTTGE 385 LE TSLP+L GE Sbjct: 64 LEGINTSLPTLGAGE 78
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 63.5 bits (153), Expect = 1e-10 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 13/104 (12%) Frame = +2 Query: 113 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 253 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 254 GKGVACQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L G+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQ 96
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 60.5 bits (145), Expect = 1e-09 Identities = 35/80 (43%), Positives = 47/80 (58%) Frame = +2 Query: 143 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTAVDQDNGGRGK 322 G + S ++KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 323 VGAEAELEQWVTSLPSLTTG 382 A LE + +L LT G Sbjct: 72 HSNPAYLENSLFTLTPLTAG 91
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 58.9 bits (141), Expect = 3e-09 Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 18/93 (19%) Frame = +2 Query: 161 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVACQLISS 286 ++KGTVVLMRKNVLD N + +D + FLG+ VA QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 287 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 T + G+GKVG + LE + SLP+L GE Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGE 108
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 58.2 bits (139), Expect = 5e-09 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 20/94 (21%) Frame = +2 Query: 152 KSARLKGTVVLMRKNVLDLN--------------------DFGATIIDGIGEFLGKGVAC 271 + +LKGTV+LM+KNVLD+N +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 272 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSL 373 +LIS+T D G+GKV EA LE +TS+P+L Sbjct: 68 RLISATVADA--SGKGKVSKEAFLEGLLTSIPTL 99
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 56.2 bits (134), Expect = 2e-08 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 22/97 (22%) Frame = +2 Query: 149 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 262 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 263 VACQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSL 373 +A QLIS+T D G GKVG + LE+ + SLP+L Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNL 100
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 55.8 bits (133), Expect = 2e-08 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 22/97 (22%) Frame = +2 Query: 149 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGI----GEFLGKG 262 +K ++KGTVVLM KNVLD N G +++ G+ FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 263 VACQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSL 373 ++ QLIS+T D G GKVG E LE+ + +LP+L Sbjct: 66 ISMQLISAT--QTDGSGNGKVGKEVYLEKHLPTLPTL 100
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 53.1 bits (126), Expect = 2e-07 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 13/91 (14%) Frame = +2 Query: 152 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------ACQLISSTA 292 K ++KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 293 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGE 385 D GG+GK+G L +T LP+L GE Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGE 92
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 0.63 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 134 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 229 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -3 Query: 333 SAPTFPRPPLSWS-TAVELISWQATPLPRNSPMPSMMVAPKSLRSS 199 +A T P PPLS + ++V ++S PL +NS +PS++ +S R+S Sbjct: 960 AASTMPPPPLSRAPSSVSMVS--PPPLHKNSRVPSLVATSESPRAS 1003
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -3 Query: 351 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQATPLPRNSPMPSMM----VAPKSLR 205 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 204 SSTFLR 187 TFLR Sbjct: 63 PETFLR 68
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -3 Query: 384 SPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQATPLPRNSPMP--SMMVAP 217 S V+ +V C +S + PRP ++W +++ + LPR +P+ S++++P Sbjct: 409 STVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTPLESGSLLISP 462
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 269 GGYQQRPPGQQQGGHEQGRQGQEGGYQQRPSGQQQGGHQQGR 310 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 223 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGR 264 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 200 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 241 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 177 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGR 218 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 154 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 195 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 246 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHEQGR 287 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 198 G + R GQ+Q + + GG Q+RP G H Q R Sbjct: 131 GGYQQRPPGQQQGGHQQGRQGQEGGYQQRPPGQQQGGHQQGR 172
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -2 Query: 385 LPRRQRRQARHPLLQLRLRAH 323 LPR + QARHP + LRL H Sbjct: 110 LPRLEDFQARHPFIDLRLSTH 130
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 186 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153
>DNAA_DESPS (Q6ARL8) Chromosomal replication initiator protein dnaA| Length = 479 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -3 Query: 342 SSASAPTFPRPPLSWSTAVELISW--QATPLPRNSPMPSMMVAPKSLRS 202 +S SAPTFP P +S ++ S A+ +PR +PS+ S+R+ Sbjct: 95 TSTSAPTFPVPSVSSASTASTASTASSASSVPRQLRLPSVPKNNASIRA 143
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +2 Query: 185 MRKNVLDLNDFGATIIDGIGEFLGKGVACQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 364 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 365 PSL 373 L Sbjct: 147 EKL 149
>P2RX2_CAVPO (O70397) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic| receptor) Length = 474 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Frame = -3 Query: 315 RPPLSWSTAVELISWQATPLPRNSPMP----SMMVAPKSLRSSTFLRMSTTVP--LSRAL 154 RP SW + LI QA P PR+ P V P+ + L + P LS + Sbjct: 382 RPSSSWPVTLALILGQAPPPPRHCSSPWHLAHQAVGPQGAEQAKLLGLQNPTPYRLSEQI 441 Query: 153 LFAPVR 136 P R Sbjct: 442 ADTPDR 447
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 276 SWQATPLPRNSPMPSMMVAPKSLRSSTFLRMSTTV 172 S TP P S PS++ +L S F+RM +T+ Sbjct: 237 SQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTL 271
>VIV_ORYSA (P37398) Protein viviparous homolog| Length = 728 Score = 28.1 bits (61), Expect = 5.3 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 11/56 (19%) Frame = +1 Query: 67 LVGAVKARRGGQEQ-DAAGRADRHPHGGEQE-------RPA---QGHGGAHAQERA 201 L+ VK RR QEQ +++G +H HG ++ +PA G GG + E A Sbjct: 632 LIRGVKVRRAAQEQGNSSGAVGKHKHGSPEKPGVSSNTKPAGAEDGTGGDDSPEAA 687
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 27.7 bits (60), Expect = 7.0 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 82 KARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQE 195 + +RGG E++ + H ++E +GHG + +QE Sbjct: 661 RVKRGGSEEEEEQKGTHHHSLEDEEDEEEGHGRSLSQE 698
>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| (Factor interacting with PAP) (hFip1) (Rearranged in hypereosinophilia) Length = 594 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 327 PTFPRPPLSWSTAVELISWQATPLPRNSPMPSMMVAPKSLRSSTF 193 P F PP + STA LI P P +P PS++ +S SS + Sbjct: 372 PPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGY 416
>CYTSA_CHICK (Q2KN97) Cytospin-A| Length = 1118 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = -3 Query: 345 SSSASAPTFPRPPLSWSTAVELISWQATPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPL 166 +SS PT S+ +A ++ S A +PR PS M P + S R S + P+ Sbjct: 834 TSSEPTPTVKTLIKSFDSASQVPSPAAATIPRTPLSPSPMKTPPAAAVSPMQRHSISGPI 893 Query: 165 S 163 S Sbjct: 894 S 894
>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)| Length = 536 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 327 PTFPRPPLSWSTAVELISWQATPLPRNSPMPSMMVAPKSLRSSTF 193 P F PP + STA LI P P +P PS++ +S SS + Sbjct: 312 PPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGY 356
>CI040_MOUSE (Q8VCE4) Protein C9orf40 homolog| Length = 163 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Frame = +1 Query: 55 VLVPLVGAVKARRGG----QEQDAAGRADRHPHGGEQERPAQGHGG 180 ++ A + RRGG QE R P GEQE P GG Sbjct: 49 IMAEPASAPRKRRGGGDDRQELQGCSREPGEPPPGEQEEPRAAGGG 94
>SCA4_RICAU (Q9AJ64) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 991 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +2 Query: 92 EEAKNKMLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDF-GATIIDGIGEFLGKGVA 268 ++ + + G+ DT+ +N S + KGT+++ + ++ ++ A +G L KGV Sbjct: 526 DDTSRAVAIDGITDTVIKSNLSTKDKGTMLIAVGDKVNASELSNAEKQQLLGSVLKKGVE 585 Query: 269 CQLIS 283 Q++S Sbjct: 586 TQVLS 590
>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) Length = 1505 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 309 PLSWSTAVELISWQATPLPRNSPMPSMMVAPKS 211 P S S+ + L + P+NSP+PS + P S Sbjct: 888 PYSQSSELSLTGASRSETPQNSPLPSSPIVPMS 920
>CHD1_MOUSE (P40201) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1711 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 101 KNKMLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDG 238 K+K LGGL G +++ RLK L+ K ++D +I G Sbjct: 596 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG 641
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = -3 Query: 384 SPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQATPLPRNSPMP--SMMVAPKS 211 S V+ ++ +C +S + PRP ++W +++ + LPR + + S++V+P Sbjct: 416 STVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFTLLESGSLLVSPAH 471 Query: 210 L 208 L Sbjct: 472 L 472
>PO2F1_MACEU (Q28466) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (Fragment) Length = 75 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -3 Query: 267 ATPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRAL 154 A LP SP PS + S S T +T+ PLS L Sbjct: 16 AVTLPSMSPSPSASASEASSASETSTTQTTSTPLSSPL 53
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -3 Query: 336 ASAPTFPRPPLSWSTAVELISWQATPLPRNSPMP 235 A AP++P+ P S+S+A P P SP P Sbjct: 99 AQAPSYPQAPYSYSSAGSAAPGPEQPPPGASPPP 132
>RL2_XANCP (Q8PC46) 50S ribosomal protein L2| Length = 275 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +1 Query: 82 KARRGGQE--QDAAGRADRHPHGGEQERPAQGH 174 K RRG + + AA A+ HPHGG + + QG+ Sbjct: 211 KRRRGVRPTVRGAAMNANDHPHGGGEAKAGQGN 243
>SOCS3_CANFA (Q68AM8) Suppressor of cytokine signaling 3 (SOCS-3)| Length = 225 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = -3 Query: 363 RLVTHCSSSASAPTFPRPPLSWSTAVELISWQATPLPRNSP 241 +LV H AP+FP PP S+ V + PLP N P Sbjct: 122 KLVHHYMPPPGAPSFPAPPTEPSSEVS-EQPPSQPLPGNPP 161
>GEI8_CAEEL (P34333) Gex-3-interacting protein 8| Length = 1780 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = -3 Query: 345 SSSASAPTFPRPPLSWSTAVELISWQATPLPRNSPMPSMMV 223 SSSASAP F +PP + S A TP+ MPS V Sbjct: 1630 SSSASAPQFLQPPAAASIAA------PTPISTPHAMPSPSV 1664
>CHD1_HUMAN (O14646) Chromodomain-helicase-DNA-binding protein 1 (EC 3.6.1.-)| (ATP-dependent helicase CHD1) (CHD-1) Length = 1709 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 101 KNKMLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDG 238 K+K LGGL G +++ RLK L+ K ++D +I G Sbjct: 598 KDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITG 643
>SDHD_BURPS (Q63IF8) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 445 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query: 43 VKNSVLVPLVGAVKARRGGQEQDAAGR--ADRHP-HGGEQERPAQGHGGAHAQ 192 VK +P+ G++KAR G E A A+RH G + +R A G A A+ Sbjct: 98 VKRDDALPVAGSIKARGGFHEVLALAESIAERHGLAGADTDRRALASGAARAR 150
>CSP_PLAKU (P04922) Circumsporozoite protein precursor (CS)| Length = 351 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQ-ERPAQGHGG 180 G A G EQ AAG P G + E+PA G GG Sbjct: 187 GEQPAAGAGGEQPAAGAGGEQPAAGARGEQPAAGAGG 223 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQ-ERPAQGHGG 180 G A G EQ AAG P G + E+PA G GG Sbjct: 160 GEQPAAGAGGEQPAAGAGGEQPAAGARGEQPAAGAGG 196 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = +1 Query: 73 GAVKARRGGQEQDAAGRADRHPHGGEQ-ERPAQGHGG 180 G A G EQ AAG P G + E+PA G GG Sbjct: 106 GEQPAAGAGGEQPAAGAGGEQPAAGARGEQPAAGAGG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.132 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,555,252 Number of Sequences: 219361 Number of extensions: 756224 Number of successful extensions: 2472 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 2287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2446 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
