ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PROB_XANAC (Q8PK34) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.2
2PROB_XANC5 (Q3BSJ0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.2
3EXOC_AZOBR (P45632) Phosphomannomutase (EC 5.4.2.8) (PMM) 28 7.6

>PROB_XANAC (Q8PK34) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 363

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 132 ALLFDDDAAAEVVNSGGSLVPWSAAGA 212
           A+L DD AAA +   G SL+P   AGA
Sbjct: 269 AILIDDGAAAALTGKGASLLPGGVAGA 295



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>PROB_XANC5 (Q3BSJ0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 384

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 132 ALLFDDDAAAEVVNSGGSLVPWSAAGA 212
           A+L DD AAA +   G SL+P   AGA
Sbjct: 291 AILIDDGAAAALTGKGASLLPGGVAGA 317



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>EXOC_AZOBR (P45632) Phosphomannomutase (EC 5.4.2.8) (PMM)|
          Length = 469

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +3

Query: 93  EPSPMDLQIVGRHALLFDD 149
           +P+P D ++ G+H LLFD+
Sbjct: 185 DPAPPDREVPGKHVLLFDE 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,131,541
Number of Sequences: 219361
Number of extensions: 293495
Number of successful extensions: 618
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 80,573,946
effective HSP length: 81
effective length of database: 62,805,705
effective search space used: 1507336920
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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