ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl14g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 2e-30
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 2e-14
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
4gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare str... 88 2e-14
5gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genom... 46 0.076
6gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 46 0.076
7ref|XM_757278.1| Ustilago maydis 521 hypothetical protein (UM062... 46 0.076
8dbj|AK107425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.076
9ref|XM_471722.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
10gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
11gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
12ref|XM_322859.1| Neurospora crassa OR74A predicted protein (NCU1... 42 1.2
13ref|XM_953024.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.2
14gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome... 42 1.2
15gb|AE005849.1| Caulobacter crescentus CB15 section 175 of 359 of... 42 1.2
16gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.2
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 o... 42 1.2
21dbj|AK100039.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
22dbj|AK099875.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
23gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, comple... 42 1.2
24dbj|AK061132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
25dbj|AK059594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
26gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
27emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
28gb|AY619724.1| Antheraea pernyi nucleopolyhedrovirus p87, HE65, ... 40 4.7
29gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 40 4.7
30gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.7
31gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete... 40 4.7
32ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 4.7
33gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete g... 40 4.7
34ref|XM_323700.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.7
35ref|XM_951236.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.7
36gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete se... 40 4.7
37ref|XM_382969.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 4.7
38gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.7
39gb|DQ428095.1| Sorghum bicolor voucher PI585454 locus PRC0162 ge... 40 4.7
40gb|DQ428094.1| Sorghum bicolor voucher PI267539 locus PRC0162 ge... 40 4.7
41gb|DQ428093.1| Sorghum bicolor voucher PI267408 locus PRC0162 ge... 40 4.7
42gb|DQ428092.1| Sorghum bicolor voucher PI152702 locus PRC0162 ge... 40 4.7
43gb|DQ428091.1| Sorghum bicolor voucher NSL92371 locus PRC0162 ge... 40 4.7
44gb|DQ428090.1| Sorghum bicolor voucher NSL87666 locus PRC0162 ge... 40 4.7
45gb|DQ428089.1| Sorghum bicolor voucher NSL56174 locus PRC0162 ge... 40 4.7
46gb|DQ428088.1| Sorghum bicolor voucher NSL56003 locus PRC0162 ge... 40 4.7
47gb|DQ428087.1| Sorghum bicolor voucher NSL55243 locus PRC0162 ge... 40 4.7
48gb|DQ428086.1| Sorghum bicolor voucher NSL51365 locus PRC0162 ge... 40 4.7
49gb|DQ428085.1| Sorghum bicolor voucher NSL51030 locus PRC0162 ge... 40 4.7
50gb|DQ428084.1| Sorghum bicolor voucher NSL50875 locus PRC0162 ge... 40 4.7
51gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, part... 40 4.7
52gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, compl... 40 4.7
53dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.7
54emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 4.7
55gb|AY104032.1| Zea mays PCO099184 mRNA sequence 40 4.7
56gb|AC130103.4| Rattus norvegicus BAC CH230-41L20 (Children's Ho... 40 4.7
57dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.7 
>dbj|AK101050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010C12, full
           insert sequence
          Length = 4093

 Score =  141 bits (71), Expect = 2e-30
 Identities = 166/198 (83%), Gaps = 6/198 (3%)
 Strand = Plus / Plus

                                                                       
Query: 163 caagtcgggcgcgaaggcgcggaagaagaagggcaaggg------cgccgccggcgatga 216
           |||||| |||||||||||| ||||||||||||| |||||      || || |||||| ||
Sbjct: 131 caagtccggcgcgaaggcgaggaagaagaaggggaaggggaagggcggcggcggcgacga 190

                                                                       
Query: 217 tgatgggggcgagaggaagaaccccaaggcttttgccttccgttcagcaacaaaagcgaa 276
           ||| || ||||||||||||||||| |||||||||||||| |  |||||  |||| || ||
Sbjct: 191 tgacggtggcgagaggaagaacccgaaggcttttgcctttcagtcagctgcaaaggccaa 250

                                                                       
Query: 277 gcggctacaatctcgatcagcggaaattgaacaacgccgtctccatgtgccaatcatgga 336
           ||| |||||| | ||||| || || ||||||||||| ||||| ||||||||||| |||||
Sbjct: 251 gcgtctacaagcacgatcggctgagattgaacaacgtcgtcttcatgtgccaattatgga 310

                             
Query: 337 tcgctcaattggggaacc 354
           |||||||||||| |||||
Sbjct: 311 tcgctcaattggtgaacc 328
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      aggcttttgccttccgttcagcaacaaaagcgaagcggctacaatctcgatcagcggaaa 302
                ||||||||||||| |  |||||  |||| || ||||| |||||| | ||||| || || |
Sbjct: 12271184 aggcttttgcctttcagtcagctgcaaaggccaagcgtctacaagcacgatcggctgaga 12271243

                                                                    
Query: 303      ttgaacaacgccgtctccatgtgccaatcatggatcgctcaattggggaacc 354
                |||||||||| ||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 12271244 ttgaacaacgtcgtcttcatgtgccaattatggatcgctcaattggtgaacc 12271295



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 74/89 (83%), Gaps = 6/89 (6%)
 Strand = Plus / Plus

                                                                            
Query: 163      caagtcgggcgcgaaggcgcggaagaagaagggcaaggg------cgccgccggcgatga 216
                |||||| |||||||||||| ||||||||||||| |||||      || || |||||| ||
Sbjct: 12270332 caagtccggcgcgaaggcgaggaagaagaaggggaaggggaagggcggcggcggcgacga 12270391

                                             
Query: 217      tgatgggggcgagaggaagaaccccaagg 245
                ||| || ||||||||||||||||| ||||
Sbjct: 12270392 tgacggtggcgagaggaagaacccgaagg 12270420



 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 166      gtcgggcgcgaaggcgcggaaga 188
                |||||||||||||||||||||||
Sbjct: 35125133 gtcgggcgcgaaggcgcggaaga 35125155
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      aggcttttgccttccgttcagcaacaaaagcgaagcggctacaatctcgatcagcggaaa 302
                ||||||||||||| |  |||||  |||| || ||||| |||||| | ||||| || || |
Sbjct: 12267947 aggcttttgcctttcagtcagctgcaaaggccaagcgtctacaagcacgatcggctgaga 12268006

                                                                    
Query: 303      ttgaacaacgccgtctccatgtgccaatcatggatcgctcaattggggaacc 354
                |||||||||| ||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 12268007 ttgaacaacgtcgtcttcatgtgccaattatggatcgctcaattggtgaacc 12268058



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 74/89 (83%), Gaps = 6/89 (6%)
 Strand = Plus / Plus

                                                                            
Query: 163      caagtcgggcgcgaaggcgcggaagaagaagggcaaggg------cgccgccggcgatga 216
                |||||| |||||||||||| ||||||||||||| |||||      || || |||||| ||
Sbjct: 12267095 caagtccggcgcgaaggcgaggaagaagaaggggaaggggaagggcggcggcggcgacga 12267154

                                             
Query: 217      tgatgggggcgagaggaagaaccccaagg 245
                ||| || ||||||||||||||||| ||||
Sbjct: 12267155 tgacggtggcgagaggaagaacccgaagg 12267183



 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 166      gtcgggcgcgaaggcgcggaaga 188
                |||||||||||||||||||||||
Sbjct: 35215205 gtcgggcgcgaaggcgcggaaga 35215227
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>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0029K10, from chromosome 3, complete sequence
          Length = 135940

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 243   aggcttttgccttccgttcagcaacaaaagcgaagcggctacaatctcgatcagcggaaa 302
             ||||||||||||| |  |||||  |||| || ||||| |||||| | ||||| || || |
Sbjct: 40717 aggcttttgcctttcagtcagctgcaaaggccaagcgtctacaagcacgatcggctgaga 40776

                                                                 
Query: 303   ttgaacaacgccgtctccatgtgccaatcatggatcgctcaattggggaacc 354
             |||||||||| ||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 40777 ttgaacaacgtcgtcttcatgtgccaattatggatcgctcaattggtgaacc 40828



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 74/89 (83%), Gaps = 6/89 (6%)
 Strand = Plus / Plus

                                                                         
Query: 163   caagtcgggcgcgaaggcgcggaagaagaagggcaaggg------cgccgccggcgatga 216
             |||||| |||||||||||| ||||||||||||| |||||      || || |||||| ||
Sbjct: 39865 caagtccggcgcgaaggcgaggaagaagaaggggaaggggaagggcggcggcggcgacga 39924

                                          
Query: 217   tgatgggggcgagaggaagaaccccaagg 245
             ||| || ||||||||||||||||| ||||
Sbjct: 39925 tgacggtggcgagaggaagaacccgaagg 39953
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>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete
              sequence
          Length = 130272

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 166    gtcgggcgcgaaggcgcggaaga 188
              |||||||||||||||||||||||
Sbjct: 126034 gtcgggcgcgaaggcgcggaaga 126056
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence,
            complete sequence
          Length = 156606

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 166  gtcgggcgcgaaggcgcggaaga 188
            |||||||||||||||||||||||
Sbjct: 3894 gtcgggcgcgaaggcgcggaaga 3916
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>ref|XM_757278.1| Ustilago maydis 521 hypothetical protein (UM06224.1) partial mRNA
          Length = 3678

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 184 gaagaagaagggcaagggcgccg 206
           |||||||||||||||||||||||
Sbjct: 849 gaagaagaagggcaagggcgccg 871
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>dbj|AK107425.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-F11, full
            insert sequence
          Length = 1453

 Score = 46.1 bits (23), Expect = 0.076
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 166  gtcgggcgcgaaggcgcggaaga 188
            |||||||||||||||||||||||
Sbjct: 1080 gtcgggcgcgaaggcgcggaaga 1058
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>ref|XM_471722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 978

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 gggggaagccggcgtcgagca 138
           |||||||||||||||||||||
Sbjct: 143 gggggaagccggcgtcgagca 163
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>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
              complete sequence
          Length = 164709

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    agaagggcaagggcgccgccg 209
              |||||||||||||||||||||
Sbjct: 153818 agaagggcaagggcgccgccg 153838
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>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0542B04, complete sequence
          Length = 182823

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 118   gggggaagccggcgtcgagca 138
             |||||||||||||||||||||
Sbjct: 94078 gggggaagccggcgtcgagca 94098
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>ref|XM_322859.1| Neurospora crassa OR74A predicted protein (NCU10002.1) partial mRNA
          Length = 3162

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 aggcgcggaagaagaagggca 197
           |||||||||||||||||||||
Sbjct: 287 aggcgcggaagaagaagggca 307
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>ref|XM_953024.1| Neurospora crassa OR74A hypothetical protein (NCU10002.1) partial
           mRNA
          Length = 3162

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 177 aggcgcggaagaagaagggca 197
           |||||||||||||||||||||
Sbjct: 287 aggcgcggaagaagaagggca 307
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>gb|AC124497.3| Mus musculus BAC clone RP23-480E8 from chromosome 5, complete sequence
          Length = 206926

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     ccctccactctcctcctttcc 43
              |||||||||||||||||||||
Sbjct: 205117 ccctccactctcctcctttcc 205097
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>gb|AE005849.1| Caulobacter crescentus CB15 section 175 of 359 of the complete genome
          Length = 14878

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 120  gggaagccggcgtcgagcagc 140
            |||||||||||||||||||||
Sbjct: 2561 gggaagccggcgtcgagcagc 2581
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 122     gaagccggcgtcgagcagccg 142
               |||||||||||||||||||||
Sbjct: 3423711 gaagccggcgtcgagcagccg 3423731
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 118      gggggaagccggcgtcgagca 138
                |||||||||||||||||||||
Sbjct: 13743186 gggggaagccggcgtcgagca 13743166
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 118      gggggaagccggcgtcgagca 138
                |||||||||||||||||||||
Sbjct: 20249482 gggggaagccggcgtcgagca 20249502
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 189      agaagggcaagggcgccgccg 209
                |||||||||||||||||||||
Sbjct: 18986440 agaagggcaagggcgccgccg 18986460
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>gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 of the complete
            genome
          Length = 16268

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 118  gggggaagccggcgtcgagca 138
            |||||||||||||||||||||
Sbjct: 6270 gggggaagccggcgtcgagca 6250
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>dbj|AK100039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151D13, full
           insert sequence
          Length = 1612

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 agaagggcaagggcgccgccg 209
           |||||||||||||||||||||
Sbjct: 191 agaagggcaagggcgccgccg 211
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>dbj|AK099875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H01, full
           insert sequence
          Length = 1533

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 agaagggcaagggcgccgccg 209
           |||||||||||||||||||||
Sbjct: 214 agaagggcaagggcgccgccg 234
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>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence
          Length = 185363

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 23   ccctccactctcctcctttcc 43
            |||||||||||||||||||||
Sbjct: 9553 ccctccactctcctcctttcc 9533
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>dbj|AK061132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-A07, full
           insert sequence
          Length = 1423

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 118 gggggaagccggcgtcgagca 138
           |||||||||||||||||||||
Sbjct: 439 gggggaagccggcgtcgagca 459
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>dbj|AK059594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D08, full
           insert sequence
          Length = 1442

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 agaagggcaagggcgccgccg 209
           |||||||||||||||||||||
Sbjct: 256 agaagggcaagggcgccgccg 276
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 118      gggggaagccggcgtcgagca 138
                |||||||||||||||||||||
Sbjct: 20559805 gggggaagccggcgtcgagca 20559825
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>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09,
              complete sequence
          Length = 187359

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 118    gggggaagccggcgtcgagca 138
              |||||||||||||||||||||
Sbjct: 137794 gggggaagccggcgtcgagca 137774
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>gb|AY619724.1| Antheraea pernyi nucleopolyhedrovirus p87, HE65, and PNK\PNL genes,
           complete cds; and unknown genes
          Length = 7406

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 257 cgttcagcaacaaaagcgaagcgg 280
           ||||||||||| ||||||||||||
Sbjct: 446 cgttcagcaacgaaagcgaagcgg 469
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>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    aggcgcggaagaagaagggcaagg 200
              ||||||||||||||||||| ||||
Sbjct: 124755 aggcgcggaagaagaaggggaagg 124778
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      tcctttccggcggccatccc 55
               ||||||||||||||||||||
Sbjct: 1763328 tcctttccggcggccatccc 1763347
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>gb|CP000147.1| Rhodobacter sphaeroides 2.4.1 plasmid D, complete sequence
          Length = 100828

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   gggggaagccggcgtcgagcagcc 141
             |||||| |||||||||||||||||
Sbjct: 51523 gggggatgccggcgtcgagcagcc 51500
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>ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG07414.4) partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 198  agggcgccgccggcgatgatgatg 221
            |||||||||| |||||||||||||
Sbjct: 1766 agggcgccgctggcgatgatgatg 1743
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>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome
          Length = 126479

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   cgttcagcaacaaaagcgaagcgg 280
             ||||||||||| ||||||||||||
Sbjct: 48684 cgttcagcaacgaaagcgaagcgg 48661
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>ref|XM_323700.1| Neurospora crassa OR74A hypothetical protein (NCU04348.1) partial
           mRNA
          Length = 3483

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 233 aagaaccccaaggcttttgccttc 256
           |||||||||||||| |||||||||
Sbjct: 82  aagaaccccaaggcctttgccttc 105
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>ref|XM_951236.1| Neurospora crassa OR74A hypothetical protein (NCU04348.1) partial
           mRNA
          Length = 3483

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 233 aagaaccccaaggcttttgccttc 256
           |||||||||||||| |||||||||
Sbjct: 82  aagaaccccaaggcctttgccttc 105
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>gb|AC171266.22| Medicago truncatula clone mth2-14o4, complete sequence
          Length = 137052

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 184   gaagaagaagggcaagggcgccgc 207
             |||||||||||||||||| |||||
Sbjct: 56134 gaagaagaagggcaagggtgccgc 56157
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>ref|XM_382969.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02793.1)
            partial mRNA
          Length = 3420

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  gaagaagaagggcaagggcg 203
            ||||||||||||||||||||
Sbjct: 1596 gaagaagaagggcaagggcg 1615
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    gtggccaagtcgggcgcgaaggcg 181
              |||||||||||||| |||||||||
Sbjct: 231552 gtggccaagtcgggggcgaaggcg 231575
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>gb|DQ428095.1| Sorghum bicolor voucher PI585454 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428094.1| Sorghum bicolor voucher PI267539 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428093.1| Sorghum bicolor voucher PI267408 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428092.1| Sorghum bicolor voucher PI152702 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428091.1| Sorghum bicolor voucher NSL92371 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428090.1| Sorghum bicolor voucher NSL87666 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428089.1| Sorghum bicolor voucher NSL56174 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428088.1| Sorghum bicolor voucher NSL56003 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428087.1| Sorghum bicolor voucher NSL55243 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428086.1| Sorghum bicolor voucher NSL51365 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428085.1| Sorghum bicolor voucher NSL51030 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|DQ428084.1| Sorghum bicolor voucher NSL50875 locus PRC0162 genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 aagaagggcaagggcgccgc 207
           ||||||||||||||||||||
Sbjct: 628 aagaagggcaagggcgccgc 647
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>gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region, partial sequence
          Length = 268433

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  ggaagaagaagggcaagggc 202
            ||||||||||||||||||||
Sbjct: 2731 ggaagaagaagggcaagggc 2750
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>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence
          Length = 183330

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ccctcgccctccactctcctcctt 40
             |||||||||||| |||||||||||
Sbjct: 23091 ccctcgccctcccctctcctcctt 23114
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 203     gccgccggcgatgatgatgg 222
               ||||||||||||||||||||
Sbjct: 7884461 gccgccggcgatgatgatgg 7884442
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 200     ggcgccgccggcgatgatga 219
               ||||||||||||||||||||
Sbjct: 2704315 ggcgccgccggcgatgatga 2704296
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>gb|AY104032.1| Zea mays PCO099184 mRNA sequence
          Length = 1242

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcctccgcaaaaccctcctc 106
           ||||||||||||||||||||
Sbjct: 7   gcctccgcaaaaccctcctc 26
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>gb|AC130103.4| Rattus norvegicus  BAC CH230-41L20 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 224716

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     cctccactctcctcctttcc 43
              ||||||||||||||||||||
Sbjct: 110683 cctccactctcctcctttcc 110664
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    ggcgccgccggcgatgatga 219
              ||||||||||||||||||||
Sbjct: 859519 ggcgccgccggcgatgatga 859538


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,716,461
Number of Sequences: 3902068
Number of extensions: 2716461
Number of successful extensions: 60104
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59292
Number of HSP's gapped (non-prelim): 812
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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