Clone Information

BLAST Search Result

Clone Name	bastl14g06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WDR75_BRARE (Q7ZVR1) WD-repeat protein 75	45	4e-05
2	WDR75_XENLA (Q6DFC6) WD-repeat protein 75	42	4e-04
3	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	36	0.027
4	WDR75_HUMAN (Q8IWA0) WD-repeat protein 75	35	0.035
5	TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12	35	0.046
6	POP1_SCHPO (P87060) WD-repeat protein pop1	34	0.079
7	CDC4_CANAL (P53699) Cell division control protein 4	34	0.079
8	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	33	0.13
9	WDR41_MOUSE (Q3UDP0) WD-repeat protein 41	33	0.13
10	WDR67_XENTR (Q6DEY8) WD-repeat protein 67	33	0.18
11	Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491	33	0.23
12	MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer ...	33	0.23
13	GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subu...	32	0.39
14	GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subu...	32	0.39
15	TUP1_KLULA (P56094) Transcriptional repressor TUP1	31	0.87
16	GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit	30	1.1
17	APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)	30	1.5
18	GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subu...	30	1.9
19	TUP1_CANAL (P56093) Transcriptional repressor TUP1	29	2.5
20	GBB1_DROME (P26308) Guanine nucleotide-binding protein beta subu...	29	2.5
21	Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409	29	3.3
22	WDR67_MOUSE (Q6NXY1) WD-repeat protein 67 (Protein 4-B-3)	29	3.3
23	PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkw...	29	3.3
24	WDR67_HUMAN (Q96DN5) WD-repeat protein 67	28	4.3
25	COFE_METAC (Q8TUD3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)	28	4.3
26	GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subu...	28	4.3
27	CR1JA_BACTU (Q45738) Pesticidal crystal protein cry1Ja (Insectic...	28	5.7
28	WDR67_XENLA (Q6DDI6) WD-repeat protein 67	28	5.7
29	YFMT_THETH (P43520) UPF0042 protein in fmt 3'region (Fragment)	28	5.7
30	Y1664_THET2 (Q72H31) UPF0042 protein TT_C1664	28	5.7
31	YQF1_SCHPO (O94394) Hypothetical WD-repeat protein C126.01c in c...	28	7.4
32	KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like pro...	28	7.4
33	WDR41_HUMAN (Q9HAD4) WD-repeat protein 41	28	7.4
34	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	28	7.4
35	MORG1_RAT (Q5BLX8) Mitogen-activated protein kinase organizer 1 ...	28	7.4
36	MORG1_MOUSE (Q9DAJ4) Mitogen-activated protein kinase organizer ...	28	7.4
37	WDFY1_HUMAN (Q8IWB7) WD repeat and FYVE domain-containing protei...	27	9.7
38	GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subu...	27	9.7
39	ATA1_SYNY3 (P37367) Cation-transporting ATPase pma1 (EC 3.6.3.-)	27	9.7

>WDR75_BRARE (Q7ZVR1) WD-repeat protein 75|
          Length = 832

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 23/55 (41%), Positives = 28/55 (50%)
 Frame = +3

Query: 132 GGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           GG      PP  S D RF+L  SG SV V+ST T   +  L+GH   VT +   P
Sbjct: 13  GGSKINFRPPIISHDSRFVLCVSGDSVKVYSTRTEEWLHNLQGHNNQVTGIAFNP 67

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>WDR75_XENLA (Q6DFC6) WD-repeat protein 75|
          Length = 832

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 129 TGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           +GG         FSADG++L+  SG  + V+STST   +  L+GH   VT + + P
Sbjct: 12  SGGSKLDYRRSVFSADGKYLICVSGDFIKVYSTSTEECIHALQGHRKLVTGIELNP 67

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>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 35.8 bits (81), Expect = 0.027
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
 Frame = +3

Query: 108 AAVAAMITGGQSYVSAPPAFSADGRFLLV-CSGRSVSVFSTSTGMLVSELEGHEGDVTAV 284
           A VA + TG   + +    F   G+ L V C    V  +ST+ G+L +EL GHE  V AV
Sbjct: 527 AEVATINTG--KHPANKSCFDRSGQVLAVACDDGKVKAYSTTDGVLQAELAGHEDAVQAV 584

Query: 285 VVVP 296
           +  P
Sbjct: 585 LFDP 588

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>WDR75_HUMAN (Q8IWA0) WD-repeat protein 75|
          Length = 830

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +3

Query: 132 GGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           GG         FSAD +++   SG  V V+ST T   V  L GH   VT + + P
Sbjct: 13  GGSELNFRRAVFSADSKYIFCVSGDFVKVYSTVTEECVHILHGHRNLVTGIQLNP 67

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>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 35.0 bits (79), Expect = 0.046
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
 Frame = +3

Query: 105 PAAVAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVS----ELEGHEGD 272
           P +V  + T   + V     FSADG+FL     R+  VF+  TG L++    E    EGD
Sbjct: 275 PISVQLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGD 334

Query: 273 V-TAVVVVPPQGNAAAT 320
           +    V   P G   AT
Sbjct: 335 LYVRSVAFSPDGKYLAT 351



 Score = 34.3 bits (77), Expect = 0.079
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = +3

Query: 165 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           FS DG+F+   S   V    TS+G LV +L GHE  V +V   P
Sbjct: 425 FSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSP 468

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>POP1_SCHPO (P87060) WD-repeat protein pop1|
          Length = 775

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 165 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDV 275
           F  D   +  CS R ++++ T TG+L+  LE HEGDV
Sbjct: 414 FDDDKIIVSTCSPR-INIYDTKTGVLIRSLEEHEGDV 449

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>CDC4_CANAL (P53699) Cell division control protein 4|
          Length = 684

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 14/27 (51%), Positives = 20/27 (74%)
 Frame = +3

Query: 204 RSVSVFSTSTGMLVSELEGHEGDVTAV 284
           + +S++ST TG L+  LEGHEG V A+
Sbjct: 345 KCISIYSTQTGQLMKVLEGHEGGVWAL 371

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +3

Query: 135  GQSYVSAPPAFSADGRFLLVCSG-RSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
            G S +S   AFS DG+ +   SG +++ ++ T++G     LEGH G V +V   P
Sbjct: 967  GSSVLSV--AFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP 1019



 Score = 33.5 bits (75), Expect = 0.13
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 135  GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 305
            G S +S   AFSADG+   V SG   +++ ++ T++G     LEGH G V +V   P + 
Sbjct: 841  GSSVLSV--AFSADGQ--RVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRE 896

Query: 306  NAAA 317
              A+
Sbjct: 897  RVAS 900



 Score = 31.6 bits (70), Expect = 0.51
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 162  AFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
            AFS DG+   V SG   +++ ++ T++G     LEGH G V +VV  P
Sbjct: 1016 AFSPDGQ--RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP 1061



 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 162  AFSADG-RFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
            AFS DG R     S +++ ++ T++G     LEGH G V +V   P
Sbjct: 1184 AFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSP 1229

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>WDR41_MOUSE (Q3UDP0) WD-repeat protein 41|
          Length = 460

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 174 DGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKL 329
           D RF        + V++  TG  + EL GH   +TAV+  PP  +  A+++L
Sbjct: 54  DFRFASAGDDGIIVVWNAQTGEKLLELRGHTQKITAVIAFPPLDSCEASSQL 105

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>WDR67_XENTR (Q6DEY8) WD-repeat protein 67|
          Length = 1088

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = +3

Query: 183 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATA 323
           FL+  +  SV  F T    LVS + GHE  VT++ V P    A  T+
Sbjct: 99  FLVALADNSVKCFDTGAKELVSWMRGHESAVTSISVHPSGRYAVTTS 145

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>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491|
          Length = 348

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 162 AFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           A SADG++L + +  +V V     GM V  L GH   V+ V   P
Sbjct: 110 AISADGQWLAIAADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSP 154

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>MORG1_BRARE (Q6DH44) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 165 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDV 275
           F+ADG +LL C S +S+ ++S S G L+    GH  +V
Sbjct: 33  FNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEV 70

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>GBLP_TRYBR (P69104) Guanine nucleotide-binding protein beta subunit-like|
           protein (Activated protein kinase C receptor homolog)
           (Track)
          Length = 318

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 210 VSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAK 326
           V V+  +TG LV++L+GH   VT+V V P     A++ K
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDK 216

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>GBLP_TRYBB (P69103) Guanine nucleotide-binding protein beta subunit-like|
           protein (Activated protein kinase C receptor homolog)
          Length = 318

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +3

Query: 210 VSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAK 326
           V V+  +TG LV++L+GH   VT+V V P     A++ K
Sbjct: 178 VKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDK 216

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>TUP1_KLULA (P56094) Transcriptional repressor TUP1|
          Length = 682

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = +3

Query: 165 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAKLAS 335
           FS+DG FL     ++  V+  STG LV+ L     D +A    P   N   TA+ ++
Sbjct: 329 FSSDGEFLATGCNKTTQVYKVSTGELVARL----SDDSASQPQPQPQNQTVTAETST 381

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>GBB_YEAST (P18851) Guanine nucleotide-binding protein beta subunit|
          Length = 423

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +3

Query: 165 FSADGRFLLVC-SGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAAT 320
           FSA GR +  C +     V+    G +V +LEGH G VT  V   P G A  T
Sbjct: 357 FSASGRLMYSCYTDIGCVVWDVLKGEIVGKLEGHGGRVTG-VRSSPDGLAVCT 408

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>APAF_HUMAN (O14727) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1248

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 162 AFSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDV 275
           AFS D RF+  CS  + V ++++ TG LV   + H   V
Sbjct: 664 AFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQV 702

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>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2|
          Length = 356

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 141 SYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVV 290
           SY+S      +D   L      + +++   +G L+    GH GDV A+ V
Sbjct: 157 SYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDV 206

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>TUP1_CANAL (P56093) Transcriptional repressor TUP1|
          Length = 514

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 165 FSADGRFLLVCSGRSVSVFSTSTGMLVSEL 254
           FS DG+F+     ++  VF+ +TG LV++L
Sbjct: 210 FSRDGKFIATGCNKTTQVFNVTTGELVAKL 239

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>GBB1_DROME (P26308) Guanine nucleotide-binding protein beta subunit 1|
          Length = 340

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
 Frame = +3

Query: 114 VAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVV 293
           V+  + G   Y+S    F  D + +      S  ++   TG+ V+   GH GDV A+ + 
Sbjct: 135 VSRELPGHGGYLSCC-RFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLA 193

Query: 294 PP-----QGNAAATAKL 329
           P       G   A+AKL
Sbjct: 194 PQCKTFVSGACDASAKL 210

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>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409|
          Length = 326

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 165 FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNA 311
           FS DG+FLL  +   V    T  G ++ +L+G +         PP  NA
Sbjct: 57  FSPDGQFLLTAAADGVGTLWTKEGEMLGQLQGQK---------PPMFNA 96

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>WDR67_MOUSE (Q6NXY1) WD-repeat protein 67 (Protein 4-B-3)|
          Length = 996

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVV 290
           FL+  +  S+  F T T  LVS + GHE  V ++ V
Sbjct: 99  FLVALADYSIKCFDTVTKELVSWMRGHESSVCSISV 134

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>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC|
           2.7.11.1)
          Length = 742

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 162 AFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           AFS DG  L+  S  +V ++  ++G  +   EGH   V AV   P
Sbjct: 634 AFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSP 678

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>WDR67_HUMAN (Q96DN5) WD-repeat protein 67|
          Length = 1066

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVV 290
           FL+  +  S+  F T T  LVS + GHE  V ++ V
Sbjct: 99  FLVALADYSIKCFDTVTKELVSWMRGHESSVFSISV 134

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>COFE_METAC (Q8TUD3) F420-0:gamma-glutamyl ligase (EC 6.3.2.-)|
          Length = 254

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 126 ITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTSTGMLVSELEGH 263
           IT G+  ++       D RF+     RS  VF  +  MLV+ L GH
Sbjct: 56  ITPGEEALAIASRTGKDARFIQAVLSRSREVFVEAPFMLVTTLAGH 101

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>GBLP_NEUCR (Q01369) Guanine nucleotide-binding protein beta subunit-like|
           protein (Cross-pathway control WD-repeat protein cpc-2)
          Length = 316

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 135 GQSYVSAPPAFSADGRFLLVCS-GRSVSVFSTSTGMLVSELEGHEGDVTAV 284
           G S++ +    S+DG + L  S  +++ ++  STG       GH  DV +V
Sbjct: 61  GHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVLSV 111

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>CR1JA_BACTU (Q45738) Pesticidal crystal protein cry1Ja (Insecticidal|
           delta-endotoxin CryIJ(a)) (Crystaline entomocidal
           protoxin) (133 kDa crystal protein)
          Length = 1167

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +3

Query: 99  AKPAAVAAMITGGQSYVSAPPAFSAD--GRFLLVCSGRSVSVFSTSTGMLVSELEGHEGD 272
           A P  V ++  G    +SAP  +SA   G  +L   G        +     S +  H G 
Sbjct: 347 APPLTVRSVNDGIYRILSAP-FYSAPFLGTIVLGSRGEKFDFALNNISPPPSTIYRHPGT 405

Query: 273 VTAVVVVPPQGNAAATAKLASH 338
           V ++V +PPQ N+    + +SH
Sbjct: 406 VDSLVSIPPQDNSVPPHRGSSH 427

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>WDR67_XENLA (Q6DDI6) WD-repeat protein 67|
          Length = 1089

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 183 FLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVV 290
           FL+  +  SV  F      LVS + GHE  VT++ +
Sbjct: 99  FLVALADNSVKCFDAGAKELVSWMRGHESAVTSISI 134

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>YFMT_THETH (P43520) UPF0042 protein in fmt 3'region (Fragment)|
          Length = 110

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 142 LWPPVIMAATAAGLARV 92
           LWPP++  A A GLARV
Sbjct: 36  LWPPLLQEAAARGLARV 52

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>Y1664_THET2 (Q72H31) UPF0042 protein TT_C1664|
          Length = 273

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 142 LWPPVIMAATAAGLARV 92
           LWPP++  A A GLARV
Sbjct: 36  LWPPLLQEAAARGLARV 52

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>YQF1_SCHPO (O94394) Hypothetical WD-repeat protein C126.01c in chromosome III|
          Length = 369

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 171 ADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVV 287
           ADG     C    + V+ T+TG +     GH   VT ++
Sbjct: 275 ADGNIATACRDEEIRVWDTTTGNVKDIYSGHYESVTKIL 313

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>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)|
            (NY-REN-62 antigen)
          Length = 1674

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 195  CSGRSVSVFSTSTGMLVSELEGHEGDVTAVVV 290
            C G  + V++  T M V E++GH+  + A+ V
Sbjct: 1603 CRGGILKVWNMDTFMPVGEMKGHDSPINAICV 1634

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>WDR41_HUMAN (Q9HAD4) WD-repeat protein 41|
          Length = 459

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 174 DGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDVTAVVVVP 296
           D RF        V V++  TG  + EL GH   +TA++  P
Sbjct: 54  DYRFASAGDDGIVVVWNAQTGEKLLELNGHTQKITAIITFP 94

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 165  FSADGRFLLVCSGRSVSVFSTSTGMLVSELEGHEGDV 275
            FSADG+F++  S  + +      G  V    GHEG V
Sbjct: 1473 FSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPV 1509

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>MORG1_RAT (Q5BLX8) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +3

Query: 135 GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 305
           G  Y     A S D   L  CSG   ++V ++  +TG +V +  GH G V  V     Q 
Sbjct: 65  GHGYEVLDAAGSFDNSHL--CSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTV-----QF 117

Query: 306 NAAATAKLA 332
           N  AT  L+
Sbjct: 118 NEEATVILS 126

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>MORG1_MOUSE (Q9DAJ4) Mitogen-activated protein kinase organizer 1 (MAPK|
           organizer 1)
          Length = 315

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +3

Query: 135 GQSYVSAPPAFSADGRFLLVCSG---RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQG 305
           G  Y     A S D   L  CSG   ++V ++  +TG +V +  GH G V  V     Q 
Sbjct: 65  GHGYEVLDAAGSFDNSHL--CSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTV-----QF 117

Query: 306 NAAATAKLA 332
           N  AT  L+
Sbjct: 118 NEEATVILS 126

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>WDFY1_HUMAN (Q8IWB7) WD repeat and FYVE domain-containing protein 1 (WD40- and|
           FYVE domain-containing protein 1)
           (Phosphoinositide-binding protein 1) (FENS-1) (Zinc
           finger FYVE domain-containing protein 17)
          Length = 410

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/26 (38%), Positives = 20/26 (76%)
 Frame = +3

Query: 225 TSTGMLVSELEGHEGDVTAVVVVPPQ 302
           +S  +L+S++EGH+  VTA +++P +
Sbjct: 11  SSRPVLLSKIEGHQDAVTAALLIPKE 36

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>GBLP_ORYSA (P49027) Guanine nucleotide-binding protein beta subunit-like|
           protein (GPB-LR) (RWD)
          Length = 334

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 204 RSVSVFSTSTGMLVSELEGHEGDVTAVVVVPPQGNAAATAK 326
           R+V V++ +   L   LEGH G V AV V P     A+  K
Sbjct: 189 RTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGK 229

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>ATA1_SYNY3 (P37367) Cation-transporting ATPase pma1 (EC 3.6.3.-)|
          Length = 905

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
 Frame = +3

Query: 114 VAAMITGGQSYVSAPPAFSADGRFLLVCSGRSVSVFSTS----------TGMLV--SELE 257
           V A+  GG+ Y  +   +S  G F  V      +V              TGML   S+LE
Sbjct: 345 VQAVYAGGKHYEVSGGGYSPKGEFWQVMGEEVDNVLLDGLPPVLEECLLTGMLCNDSQLE 404

Query: 258 GHEGDVTAVVVVPPQGNAAATAKLA 332
            H GD  AVV  P +G   A+A  A
Sbjct: 405 -HRGDDWAVVGDPTEGALLASAAKA 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,723,209
Number of Sequences: 219361
Number of extensions: 251567
Number of successful extensions: 1299
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result