ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 73 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 132 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 133 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 192 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 193 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 252 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 253 aacgacctcgacgac 267
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 155149 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 155208 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 155209 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 155268 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 155269 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 155328 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 155329 aacgacctcgacgac 155343
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 46576 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 46635 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 46636 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 46695 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 46696 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 46755 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 46756 aacgacctcgacgac 46770
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5283378 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5283437 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5283438 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5283497 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5283498 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5283557 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 5283558 aacgacctcgacgac 5283572
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 219 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 278 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 279 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 338 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 339 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 398 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 399 aacgacctcgacgac 413
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 252 bits (127), Expect = 8e-64 Identities = 178/195 (91%) Strand = Plus / Plus Query: 217 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 276 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5284165 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5284224 Query: 277 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 336 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5284225 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5284284 Query: 337 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 396 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5284285 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5284344 Query: 397 aacgacctcgacgac 411 ||||||||||||||| Sbjct: 5284345 aacgacctcgacgac 5284359
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 228 bits (115), Expect = 1e-56 Identities = 169/187 (90%) Strand = Plus / Plus Query: 225 gtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgccaacgccgg 284 |||||||||||| |||||||| ||| |||| ||||||||||| |||||||||||||| || Sbjct: 227 gtggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgg 286 Query: 285 tatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccgctcggccg 344 |||||||||| ||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 287 aatgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccg 346 Query: 345 cctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 347 cctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacct 406 Query: 405 cgacgac 411 ||||||| Sbjct: 407 cgacgac 413
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 410 ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacga 359 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 275 ccaacgccggtatgaaccagtacaagcc 302 ||||||| |||||||||||||||||||| Sbjct: 224 ccaacgctggtatgaaccagtacaagcc 251
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 247 cccttcgaggaccccacgctcctgttcgccaacgccggtatgaaccagtacaa 299 |||| ||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 148 ccctacgatgacccaacgcttctcttcgccaacgccggtatgaaccagtacaa 200 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 370 aagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 ||||||||||| || || || ||||| ||||||||||||||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgac 312
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 484 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 332 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 375
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 345 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 193 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 236
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 485 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 333 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 376
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 3356 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 3508 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 3465
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 24546 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 24394 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 24437
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| |||||||||||||| ||||| |||||||||||||| || |||||| Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgac 255 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 262 acgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcctcggc 315 ||||| ||||||||||| || || |||||||||| ||||||| |||| |||||| Sbjct: 106 acgctgctgttcgccaatgcgggcatgaaccagttcaagccgatctttctcggc 159
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 326 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 174 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 217
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 19518 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 19670 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 19627
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 411 |||||| ||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgac 1860 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 2012 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 1969
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 366 ccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||||| |||||||||| ||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 269 tgttcgccaacgccggtatgaaccagtacaagcc 302 |||| ||||||||||||||||||||||||||||| Sbjct: 131 tgtttgccaacgccggtatgaaccagtacaagcc 164 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 370 aagtgcatccgcgccggaggcaagcacaacga 401 |||||||| || |||||||| ||||||||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacga 263
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 6e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 410 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 302 ||||| || ||||| |||||||| || ||||||||||||| |||||| Sbjct: 115 gaccctaccctcctcttcgccaatgcgggtatgaaccagttcaagcc 161
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 367 cagaagtgcatccgcgccggaggcaagcacaacgacctcgac 408 ||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacctcgac 1704491
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 269 tgttcgccaacgccggtatgaaccagtacaagcc 302 |||| ||||||||||||||||||||||||||||| Sbjct: 553292 tgtttgccaacgccggtatgaaccagtacaagcc 553259 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 370 aagtgcatccgcgccggaggcaagcacaacga 401 |||||||| || |||||||| ||||||||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacga 553160
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 300 ||||| ||||||||||||||||| ||||| |||||||||| |||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||||| |||| ||||| ||||||||||||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacct 164035
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 367 cagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||| |||||||||| |||||||||||||||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacctcga 3553652
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 367 cagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||||||| | |||||||| |||||||||||||||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacctcga 4336085 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ccgctcggccgcctgcgccg 353 |||||||||||||||||||| Sbjct: 4161736 ccgctcggccgcctgcgccg 4161755
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 311 ||||||||||| |||| || |||||||| |||||||||| ||||||| ||||||| Sbjct: 1350851 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 1350796 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Minus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||| |||||||| ||||| || || ||||||||||||||||| Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacct 1350703
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgac 408 |||||||| || | |||||||| ||||||||||||||||||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacctcgac 25595
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 311 ||||||||||| |||| || |||||||| |||||||||| ||||||| ||||||| Sbjct: 118 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 173 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||| |||||||| ||||| || || ||||||||||||||||| Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacct 266
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 362 acacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||||||||||||||||| ||||||||||||||||| Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgacct 2171014
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 261 cacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 311 |||||| || |||||||| || |||||||||||||||||||| ||||||| Sbjct: 377 cacgcttcttttcgccaatgctggtatgaaccagtacaagcctctcttcct 427
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 366 ccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||||| | |||||||| ||||||||||||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacct 4160978 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtcttcctcggcgccgccga 323 |||||||||||||||||||| Sbjct: 2728320 gtcttcctcggcgccgccga 2728339
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaa 398 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacctcgac 1821430
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacctcgac 1947084
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgac 160208
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 373 tgcatccgcgccggaggcaagcacaacgac 402 ||||||||||| |||||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacctcgac 2422285
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacctcgac 4276005
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| ||||||||||||||||||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacctcgac 6318177
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 259 cccacgctcctgttcgccaacgccggtatgaaccagtacaag 300 ||||||||| | ||| ||||||||||||||||||||| |||| Sbjct: 3572273 cccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 410 ||||||||||| | || ||||| ||||||||||||||||| ||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacga 2140815
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacct 572 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacct 572 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacctcga 906223
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacct 637 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 489 gaccccactctgctcttcgccaacgctggcatgaaccagt 528
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacctcga 273263
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacctcga 289240
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacctcga 194253
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacct 366
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacct 366
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacct 646 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 498 gaccccactctgctcttcgccaacgctggcatgaaccagt 537
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacct 625 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 477 gaccccactctgctcttcgccaacgctggcatgaaccagt 516
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacct 306 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacct 306 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacct 448 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 300 gaccccactctgctcttcgccaacgctggcatgaaccagt 339
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacctcga 583656
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacct 638 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 490 gaccccactctgctcttcgccaacgctggcatgaaccagt 529
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 300 ||||| ||||| |||||| |||| |||||||||||||||| |||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagttcaag 172980
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacct 630
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacct 80735
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagt 295 |||||||| || || ||||||||||| || |||||||||| Sbjct: 70 gaccccaccctgctcttcgccaacgctggcatgaaccagt 109
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcga 841540
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacct 166551
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcctcggc 315 |||||||| || || ||| ||||||| || |||||||||| |||||| ||||||||||| Sbjct: 115 gaccccaccctgctcttcaccaacgctggcatgaaccagttcaagcccatcttcctcggc 174
>ref|XM_970534.1| PREDICTED: Tribolium castaneum similar to CG4633-PA (LOC664536), mRNA Length = 3135 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Plus Query: 367 cagaagtgcatccgcgccggaggcaagcacaacgac 402 |||||||||||||| | ||||||||| ||||||||| Sbjct: 412 cagaagtgcatccgagtcggaggcaaacacaacgac 447
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Minus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||||||||| | || |||||||||||||| |||||||| Sbjct: 1680298 cccagaagtgcgttcgggccggaggcaagcataacgacct 1680259
>gb|AY846866.1| Antheraea pernyi nucleopolyhedrovirus occlusion-derived virus envelope-56 protein (odv-e56) gene, complete cds Length = 1602 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 315 cgccgccgacccggactcgccgc 337 ||||||||||||||||||||||| Sbjct: 990 cgccgccgacccggactcgccgc 1012
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 315 cgccgccgacccggactcgccgc 337 ||||||||||||||||||||||| Sbjct: 7946 cgccgccgacccggactcgccgc 7968
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 354
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 354
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Minus Query: 370 aagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| | |||||||| ||||||||||||||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacct 9710
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 410 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaacca 296
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 351 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaacca 237
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 46.1 bits (23), Expect = 0.089 Identities = 35/39 (89%) Strand = Plus / Plus Query: 366 ccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| ||| | |||||||| ||||||||||||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 9248
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcga 243621 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 242002 gaccccacgctgctcttcgccaatgccggaatgaacca 242039 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 203829 gaccccacgctgctcttcgccaatgccggaatgaacca 203866 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 159527 gaccccacgctgctcttcgccaatgccggaatgaacca 159564
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 99764 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 99166 gaccccacgctgctcttcgccaatgccggaatgaacca 99203 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 34711 gaccccacgctgctcttcgccaatgccggaatgaacca 34748 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 12338 gaccccacgctgctcttcgccaatgccggaatgaacca 12375
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.089 Identities = 35/39 (89%) Strand = Plus / Minus Query: 366 ccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 46.1 bits (23), Expect = 0.089 Identities = 35/39 (89%) Strand = Plus / Plus Query: 366 ccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| ||| | |||||||| ||||||||||||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 12626
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 46.1 bits (23), Expect = 0.089 Identities = 41/47 (87%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcga 407 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcga 456 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaacca 342
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 367 cagaagtgcatccgcgccggaggcaagcacaacgacctcgac 408 ||||| ||| ||||||| || ||||||||||| ||||||||| Sbjct: 2184182 cagaaatgcgtccgcgcgggcggcaagcacaatgacctcgac 2184141
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| |||||||| |||||||||||| Sbjct: 166334 cgcgccggcggcaagcataacgacctcgac 166305
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| |||||||| |||||||||||| Sbjct: 2240 cgcgccggcggcaagcataacgacctcgac 2269
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||| ||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacctcgac 1472
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacct 3072317
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacct 3479180
>emb|AJ243674.3|SGR243674 Streptomyces griseus subsp. griseus (partial) ppk, mutT, pstS, pstC, pstA, pstB, pitH genes and ORF Length = 9302 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 303 ggtcttcctcggcgccgccgacccgg 328 |||| ||||||||||||||||||||| Sbjct: 3000 ggtcgtcctcggcgccgccgacccgg 3025
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| |||||||| |||||||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacctcgac 47225
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| |||||||||||||| |||||| Sbjct: 3880128 cgcgccggcggcaagcacaacgatctcgac 3880157
>ref|XM_694672.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC571112), partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 265 gaccccacgctgctcttcgccaatgccggaatgaacca 302
>ref|XM_685358.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561962), mRNA Length = 3195 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 2275 gaccccacgctgctcttcgccaatgccggaatgaacca 2312
>ref|XM_685225.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC561826), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_685155.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561748), mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 1525 gaccccacgctgctcttcgccaatgccggaatgaacca 1562
>ref|XM_683097.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559731), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682611.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC559282), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>ref|XM_702495.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 2 (LOC559189), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682457.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559142), mRNA Length = 2334 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 44.1 bits (22), Expect = 0.35 Identities = 28/30 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcgac 408 |||||||| |||||||||||||| |||||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgac 1319513
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgac 402 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 286 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ttcgccaacgccggtatgaaccagtacaagccggtcttcctcgg 314 ||||||||||| || |||||||| | ||||||| | |||||||| Sbjct: 155 ttcgccaacgcgggaatgaaccaattcaagccgttgttcctcgg 198
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgac 402 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 10552
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18, complete sequence Length = 184543 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 151021 gaccccacgctgctcttcgccaatgccggaatgaacca 151058 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaacca 293 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122916 gaccccacgctgctcttcgccaatgccggaatgaacca 122953
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacct 404 |||||||| ||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccgcgccggaggcaagcacaacgac 402 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 281 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 271 ttcgccaacgccggtatgaaccagtacaagccggtcttcctcgg 314 ||||||||||| || |||||||| | ||||||| | |||||||| Sbjct: 150 ttcgccaacgcgggaatgaaccaattcaagccgttgttcctcgg 193
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 ||||| || |||||||||||||||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacctcga 1524969
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 ggtatgaaccagtacaagccggtcttcct 311 |||||||||||||||||||| ||||||| Sbjct: 732024 ggtatgaaccagtacaagcctctcttcct 731996
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 360 caacacccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||| |||||||||||||| || || ||||| ||||| ||||| Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacct 289
>ref|XM_921089.2| PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgctcggccgcctgcgccgtg 355 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|XM_898698.2| PREDICTED: Mus musculus hypothetical LOC625276 (LOC625276), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgctcggccgcctgcgccgtg 355 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| |||||||||||||| ||||| Sbjct: 598444 cgcgccggcggcaagcacaacgatctcga 598416
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 cgcgccggaggcaagcacaacgacctcga 407 |||||||| ||||||||||| |||||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacctcga 3251663 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 gactcgccgctcggccgcctgcgc 351 ||||||||| |||||||||||||| Sbjct: 3882430 gactcgccggtcggccgcctgcgc 3882453
>dbj|AK183233.1| Mus musculus cDNA, clone:Y0G0125D01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 368 agaagtgcatccgcgccggaggcaagcacaacgacct 404 |||| |||||||| || || ||||||||||||||||| Sbjct: 182 agaaatgcatccgagctgggggcaagcacaacgacct 218
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 296 acaagccggtcttcctcggcgccgccgac 324 ||||| |||||||| |||||||||||||| Sbjct: 575415 acaagtcggtcttcgtcggcgccgccgac 575443
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cgctcggccgcctgcgccgtg 355 ||||||||||||||||||||| Sbjct: 23900 cgctcggccgcctgcgccgtg 23880
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 364 acccagaagtgcatccgcgccggaggcaagcacaacgacct 404 |||||||| |||||||| || || ||||| ||||||||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacct 254
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 256 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 300 |||||||||||| ||||| |||| ||||| ||||| |||| |||| Sbjct: 1322035 gaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ggcaagcacaacgacctcga 407 |||||||||||||||||||| Sbjct: 1322152 ggcaagcacaacgacctcga 1322171
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 150 ggcggcgccgggctggccgtccgccctgg 178 ||||||||||||||||||| ||||||||| Sbjct: 178173 ggcggcgccgggctggccg-ccgccctgg 178200
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgac 408 ||||||| ||| | ||||| || ||||||||||| ||||||||| Sbjct: 2161380 cccagaaatgcgtgcgcgcaggcggcaagcacaatgacctcgac 2161337
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 365 cccagaagtgcatccgcgccggaggcaagcacaacgacct 404 ||||||||||| | || ||||| || |||||||||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacct 232630
>ref|XM_467910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtcttcctcggcgccgccga 323 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>gb|BC008881.2| Homo sapiens kinesin 2, transcript variant 1, mRNA (cDNA clone MGC:15245 IMAGE:4301579), complete cds Length = 2595 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ccgctcggccgcctgcgccg 353 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 cgccgggctggccgtccgcc 174 |||||||||||||||||||| Sbjct: 3590345 cgccgggctggccgtccgcc 3590326
>ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (MG01370.4) partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 acacgccgtggccgtcgagc 237 |||||||||||||||||||| Sbjct: 943 acacgccgtggccgtcgagc 924
>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ctggccgtccgccctggtcc 181 |||||||||||||||||||| Sbjct: 2580 ctggccgtccgccctggtcc 2599
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcggccgcctgcgccgtgc 356 |||||||||||||||||||| Sbjct: 134136 ctcggccgcctgcgccgtgc 134155
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcggccgcctgcgccgtgc 356 |||||||||||||||||||| Sbjct: 133096 ctcggccgcctgcgccgtgc 133115
>ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 3 (LOC482962), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgcgccgcctgctcctcacc 42 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 2 (LOC482962), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgcgccgcctgctcctcacc 42 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 1 (LOC482962), mRNA Length = 2269 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgcgccgcctgctcctcacc 42 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 268 ctgttcgccaacgccggtatgaaccagtacaa 299 |||||| ||||||| ||||||||||| ||||| Sbjct: 130 ctgttcaccaacgcgggtatgaaccaatacaa 161
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ggcaagcacaacgacctcga 407 |||||||||||||||||||| Sbjct: 594218 ggcaagcacaacgacctcga 594199
>emb|Z49821.1|SCPDR10 S.cerevisiae PDR10, MYO2, PDR10, SCD5, MIP1, ALA1, KRE5 and TEA1 genes Length = 29445 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 271 ttcgccaacgccggtatgaaccagtacaagcc 302 ||||| || |||||||||||||| |||||||| Sbjct: 21231 ttcgctaatgccggtatgaaccaatacaagcc 21200
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 268 ctgttcgccaacgccggtatgaaccagtacaa 299 |||||| ||||||| ||||||||||| ||||| Sbjct: 527221 ctgttcaccaacgcgggtatgaaccaatacaa 527190
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 cggcgccgggctggccgtccgccc 175 ||||||||||| |||||||||||| Sbjct: 71029 cggcgccgggcgggccgtccgccc 71052
>gb|DQ417138.1| Ictalurus punctatus clone SBBD12B alanyl-tRNA synthetase-like mRNA, partial cds Length = 349 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 aacacccagaagtgcatccg 380 |||||||||||||||||||| Sbjct: 283 aacacccagaagtgcatccg 302
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcggccgcctgcgccgtgc 356 |||||||||||||||||||| Sbjct: 133375 ctcggccgcctgcgccgtgc 133394
>ref|NM_005552.3| Homo sapiens kinesin 2 (KNS2), transcript variant 1, mRNA Length = 2595 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ccgctcggccgcctgcgccg 353 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1), interleukin 10 (IL-10), ankyrin-repeat protein ANK-2 (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia virus F10L-like protein (F10L), vaccinia virus F9L-like protein (F9L), vascular endothelial growth factor-like protein (VEGF-E), and ORF3 genes, complete cds Length = 9979 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcggccgcctgcgccgtgc 356 |||||||||||||||||||| Sbjct: 7314 ctcggccgcctgcgccgtgc 7333
>gb|DQ066215.1| Ixodes scapularis isolate ISUFL14 ADP/ATP translocase mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 293 agtacaagccggtcttcctcggcg 316 ||||||||| |||||||||||||| Sbjct: 281 agtacaagcaggtcttcctcggcg 304
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtcttcctcggcgccgccga 323 |||||||||||||||||||| Sbjct: 32040633 gtcttcctcggcgccgccga 32040652
>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete sequence Length = 187610 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 caagtcaaagccaagagctaggga 68 |||||||||||| ||||||||||| Sbjct: 109716 caagtcaaagcctagagctaggga 109739
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtcttcctcggcgccgccga 323 |||||||||||||||||||| Sbjct: 61008 gtcttcctcggcgccgccga 61027
>dbj|AK069088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I17, full insert sequence Length = 1559 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 gtcttcctcggcgccgccga 323 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cgccgctcggccgcctgcgc 351 |||||||||||||||||||| Sbjct: 2089326 cgccgctcggccgcctgcgc 2089345
>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22, complete sequence Length = 76145 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 tcacagcgcgccgcctgctc 36 |||||||||||||||||||| Sbjct: 28184 tcacagcgcgccgcctgctc 28203
>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22, complete sequence Length = 183103 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tcacagcgcgccgcctgctc 36 |||||||||||||||||||| Sbjct: 18290 tcacagcgcgccgcctgctc 18271
>emb|Z75243.1|SCYOR335C S.cerevisiae chromosome XV reading frame ORF YOR335c Length = 3764 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 271 ttcgccaacgccggtatgaaccagtacaagcc 302 ||||| || |||||||||||||| |||||||| Sbjct: 2969 ttcgctaatgccggtatgaaccaatacaagcc 2938
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ccgctcggccgcctgcgccg 353 |||||||||||||||||||| Sbjct: 52087 ccgctcggccgcctgcgccg 52106
>gb|DQ332533.1| Synthetic construct Saccharomyces cerevisiae clone FLH202967.01X ALA1 gene, complete sequence Length = 2877 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 ttcgccaacgccggtatgaaccagtacaagcc 302 ||||| || |||||||||||||| |||||||| Sbjct: 133 ttcgctaatgccggtatgaaccaatacaagcc 164
>gb|U18672.1|SCU18672 Saccharomyces cerevisiae cytoplasmic alanyl-tRNA synthetase gene, complete cds Length = 2992 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 ttcgccaacgccggtatgaaccagtacaagcc 302 ||||| || |||||||||||||| |||||||| Sbjct: 196 ttcgctaatgccggtatgaaccaatacaagcc 227
>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctcggccgcctgcgccgtgc 356 |||||||||||||||||||| Sbjct: 1659 ctcggccgcctgcgccgtgc 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,403,643 Number of Sequences: 3902068 Number of extensions: 2403643 Number of successful extensions: 59216 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 55124 Number of HSP's gapped (non-prelim): 4093 length of query: 411 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 389 effective length of database: 17,147,199,772 effective search space: 6670260711308 effective search space used: 6670260711308 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
