>gb|AC121983.3| Mus musculus BAC clone RP24-292F8 from chromosome 5, complete sequence
          Length = 161350

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 261    tctgaggttctgttacaaaataaat 285
              |||||||||||||| ||||||||||
Sbjct: 153635 tctgaggttctgtttcaaaataaat 153659

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 69       ctcctctcccctcaagcccaaggccgccgcctc 101
                ||||||||||||| | |||| ||||||||||||
Sbjct: 20424993 ctcctctcccctctatcccatggccgccgcctc 20425025

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 257      atgatctgaggttctgttacaaaataaat 285
                ||||||||||||| | |||||||||||||
Sbjct: 32173510 atgatctgaggttgttttacaaaataaat 32173482

>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0403C05
          Length = 151085

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 257   atgatctgaggttctgttacaaaataaat 285
             ||||||||||||| | |||||||||||||
Sbjct: 44263 atgatctgaggttgttttacaaaataaat 44235

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 69    ctcctctcccctcaagcccaaggccgccgcctc 101
             ||||||||||||| | |||| ||||||||||||
Sbjct: 53132 ctcctctcccctctatcccatggccgccgcctc 53164

>gb|AC172745.4| Mus musculus chromosome 5, clone wi1-1010L24, complete sequence
          Length = 38758

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 261   tctgaggttctgttacaaaataaat 285
             |||||||||||||| ||||||||||
Sbjct: 36156 tctgaggttctgtttcaaaataaat 36132

>emb|AL731717.11| Mouse DNA sequence from clone RP23-92C4 on chromosome X, complete
              sequence
          Length = 234900

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     tcctcctctcccctcaagccc 87
              |||||||||||||||||||||
Sbjct: 227369 tcctcctctcccctcaagccc 227389

>ref|XM_480307.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1927

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 257 atgatctgaggttctgttacaaaataaatccagtaa 292
           ||||||||||| | | ||||||||||||| ||||||
Sbjct: 494 atgatctgaggctgttttacaaaataaattcagtaa 529

>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     tcctcctctcccctcaagcc 86
              ||||||||||||||||||||
Sbjct: 120730 tcctcctctcccctcaagcc 120749

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       caacaccaacgcaaacccgt 22
               ||||||||||||||||||||
Sbjct: 3805409 caacaccaacgcaaacccgt 3805428

>gb|AC126556.4| Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence
          Length = 179685

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    aagctgcagatcagcttgtg 247
              ||||||||||||||||||||
Sbjct: 105220 aagctgcagatcagcttgtg 105239

>gb|AC140268.2| Mus musculus BAC clone RP23-321K4 from chromosome 7, complete sequence
          Length = 193572

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ctcctctcccctcaagccca 88
             ||||||||||||||||||||
Sbjct: 65567 ctcctctcccctcaagccca 65586

>gb|AC099394.6| Homo sapiens BAC clone RP13-530H6 from 7, complete sequence
          Length = 60024

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tcctcctctcccctcaagcc 86
             ||||||||||||||||||||
Sbjct: 53784 tcctcctctcccctcaagcc 53765

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 257     atgatctgaggttctgttacaaaataaatccagtaa 292
               ||||||||||| | | ||||||||||||| ||||||
Sbjct: 4233008 atgatctgaggctgttttacaaaataaattcagtaa 4233043

>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1590_E05
          Length = 148205

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 257    atgatctgaggttctgttacaaaataaatccagtaa 292
              ||||||||||| | | ||||||||||||| ||||||
Sbjct: 132631 atgatctgaggctgttttacaaaataaattcagtaa 132666


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,206,272
Number of Sequences: 3902068
Number of extensions: 3206272
Number of successful extensions: 69919
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69765
Number of HSP's gapped (non-prelim): 154
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)