ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl14f11 |
|---|---|
| Clone Library Name | barley_pub |
>APD73_APIME (Q06602) Apidaecins type 73 precursor [Contains: Apidaecin;| Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] (Fragment) Length = 283 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/85 (30%), Positives = 34/85 (40%) Frame = +3 Query: 105 PYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADP 284 P + R R++ K P P++ PRPPHP L RR+A+P Sbjct: 25 PTRPTRLRREAKPEAEPGNNRPVYIP--QPRPPHPRL-----------------RREAEP 65 Query: 285 GWWFAANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 66 EAEPGNNRPVYIPQ-PRPPHPRLRR 89 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 120 RERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFA 299 R R++ + P P++ PRPPHP L RR+A+P Sbjct: 142 RLRREAELEAEPGNNRPVYIS--QPRPPHPRL-----------------RREAEPEAEPG 182 Query: 300 ANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 183 NNRPVYIPQ-PRPPHPRLRR 201 Score = 28.1 bits (61), Expect = 5.4 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 120 RERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFA 299 R R++ + P P++ PRPPHP L RR+A+P Sbjct: 86 RLRREAELEAEPGNNRPVYIS--QPRPPHPRL-----------------RREAEPEAEPG 126 Query: 300 ANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 127 NNRPVYIPQ-PRPPHPRLRR 145 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 120 RERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFA 299 R R++ + P P++ PRPPHP L RR+A+P Sbjct: 198 RLRREAEPEAEPGNNRPVYIP--QPRPPHPRL-----------------RREAEPEAEPG 238 Query: 300 ANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 239 NNRPVYIPQ-PRPPHPRLRR 257 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 120 RERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFA 299 R R++ + P P++ PRPPHP L RR+A+P Sbjct: 170 RLRREAEPEAEPGNNRPVYIP--QPRPPHPRL-----------------RREAEPEAEPG 210 Query: 300 ANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 211 NNRPVYIPQ-PRPPHPRLRR 229
>APD14_APIME (Q06601) Apidaecins type 14 precursor [Contains: Apidaecin-2| (Apidaecin II); Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 168 Score = 30.4 bits (67), Expect = 1.1 Identities = 27/85 (31%), Positives = 34/85 (40%) Frame = +3 Query: 105 PYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADP 284 P + R R++ K P PI+ PRPPHP L RR+A+P Sbjct: 26 PTRPARLRREAKPEAEPGNNRPIYIP--QPRPPHPRL-----------------RREAEP 66 Query: 285 GWWFAANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 67 KAEPGNNRPIYIPQ-PRPPHPRLRR 90
>ENW1_PONPY (P61564) ERV-W1 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (ERVWE1 envelope protein) (Syncytin) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 538 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +3 Query: 198 PPHPVLFSPSGLFFVCGSA 254 PP V+ PSG+FFVCG++ Sbjct: 257 PPTQVVCLPSGIFFVCGTS 275
>TONB_PSEAE (Q51368) Protein tonB| Length = 342 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 95 IHPSIPKG*RKKERKKSPLPEPSKSNL*RGTDASPSPSSTVLP 223 + +IPK K E K P PEPS + PSPSS P Sbjct: 182 VENAIPKAKPKPEPKPKPEPEPSTE-----ASSQPSPSSAAPP 219
>GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1329 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +3 Query: 123 ERKKGKS--PHCPSRQNPIFDGGRTPRPPHPVLFSPSG 230 ER KG S H P+R+ + GG P PP P L P+G Sbjct: 42 ERPKGLSGGAHNPARRRVVCGGGDLPEPPDPGLL-PNG 78
>PDLI7_BRARE (Q6P7E4) PDZ and LIM domain protein 7| Length = 419 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +2 Query: 146 PLPEPSKSNL*RGTDASPSPSSTVLPLRFVFCLRLRDNYYSQAGR---PRLVVCC 301 P P ++S++ + SP+ SST PL +R Y GR P +CC Sbjct: 217 PTPMQNRSSILQAAQQSPAHSSTATPLCAACSKIIRGRYVVALGRSWHPEEFMCC 271
>ENW1_PANTR (P61563) ERV-W1 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (ERVWE1 envelope protein) (Syncytin) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 538 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +3 Query: 198 PPHPVLFSPSGLFFVCGSA 254 PP ++ PSG+FFVCG++ Sbjct: 257 PPTQIVCLPSGIFFVCGTS 275
>ENW1_HUMAN (Q9UQF0) HERV-W_7q21.2 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (HERV-7q Envelope protein) (HERV-W envelope protein) (Syncytin) (Syncytin-1) (Enverin) (Env-W) [Contains: Surface protein (SU); Transmembrane protein (T Length = 538 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +3 Query: 198 PPHPVLFSPSGLFFVCGSA 254 PP ++ PSG+FFVCG++ Sbjct: 257 PPTQIVCLPSGIFFVCGTS 275
>ENW1_GORGO (P61561) ERV-W1 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (ERVWE1 envelope protein) (Syncytin) (Syncytin-1) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 538 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = +3 Query: 198 PPHPVLFSPSGLFFVCGSA 254 PP ++ PSG+FFVCG++ Sbjct: 257 PPTQIVCLPSGIFFVCGTS 275
>APD22_APIME (P35581) Apidaecins type 22 precursor [Contains: Apidaecin-1B| (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 144 Score = 28.9 bits (63), Expect = 3.2 Identities = 25/85 (29%), Positives = 34/85 (40%) Frame = +3 Query: 105 PYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADP 284 P + R R++ + P P++ PRPPHP L RR+A+P Sbjct: 26 PTRPTRLRREAEPEAEPGNNRPVYIP--QPRPPHPRL-----------------RREAEP 66 Query: 285 GWWFAANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 67 EAEPGNNRPVYIPQ-PRPPHPRLRR 90 Score = 27.7 bits (60), Expect = 7.0 Identities = 24/80 (30%), Positives = 32/80 (40%) Frame = +3 Query: 120 RERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFA 299 R R++ + P P++ PRPPHP L RR+A+P Sbjct: 59 RLRREAEPEAEPGNNRPVYIP--QPRPPHPRL-----------------RREAEPEAEPG 99 Query: 300 ANRCCLIRESPRDSHPRFGR 359 NR I + PR HPR R Sbjct: 100 NNRPVYIPQ-PRPPHPRLRR 118
>HP20_TAMSI (Q06575) Hibernation-associated plasma protein HP-20 precursor| (Hibernator-specific blood complex, 20 kDa subunit) Length = 196 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Frame = +3 Query: 132 KGKSPHCPSRQNPIFD---GGRTPRPPHPVLFS 221 KG S CP R+ F GR P P PV+F+ Sbjct: 60 KGPSVKCPCRERSAFTVKFSGRLPPPSEPVVFT 92
>RPGR_CANFA (Q9N1T2) X-linked retinitis pigmentosa GTPase regulator| Length = 1003 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = +3 Query: 84 IIHPSIHPYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFF 239 ++H ++ R RER+K +R P DG P P PV FSPS + F Sbjct: 401 VLHQTLSARVRRREREKSPDSFQMTRTLPPIDG--IPMP--PVCFSPSPIPF 448
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +3 Query: 102 HPYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHP 209 HP R + P +Q P+ GG P PPHP Sbjct: 532 HPISRPASNQSSSGG--PMQQPPVGAGGPPPMPPHP 565
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 283 GSACLRIIIIAEPQTKNKPEGENSTGWGGRGVRP 182 GS ++ I P N P+ +N GW RG++P Sbjct: 552 GSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKP 585
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 250 EPQTKNKPEGENSTGWGGRGVRPPSKIGF 164 +PQ KP TG GG G P+++GF Sbjct: 33 KPQNTKKPPRGGGTGGGGGGGDQPARLGF 61
>YED3_YEAST (P32633) Hypothetical 16.1 kDa protein in HYP2-MCM3 intergenic| region Length = 139 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +3 Query: 189 TPRPPHPVLFSPSGLFFVCGSAIIIIRR-QADPGWWF 296 TP P H VLF+ G FF+C ++++ Q +P ++F Sbjct: 9 TPLPSHHVLFAEPG-FFLCNFFFVLLKHTQINPFFYF 44
>PHF6_MOUSE (Q9D4J7) PHD finger protein 6| Length = 364 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Frame = +2 Query: 83 NNPSIHPSIPKG*RKKERKKSP-------LPEPSKSNL*RGTDASPSPS 208 N + PS PK +KK RK P LPE S+S GTD S S Sbjct: 147 NEHELEPSSPKT-KKKSRKGRPRKTNLKGLPEDSRSTSSHGTDEMESSS 194
>ENW1_HYLPI (P61562) ERV-W1 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (ERVWE1 envelope protein) (Syncytin) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 538 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +3 Query: 198 PPHPVLFSPSGLFFVCGSA 254 PP + PSG+FFVCG++ Sbjct: 257 PPTRIFCLPSGIFFVCGTS 275
>PMG1_ARATH (O04499) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (BPG-independent PGAM 1) (PGAM-I 1) Length = 557 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = +1 Query: 103 IHTKGIEKERKEKVPTARAVKIQ---SLTGDGRLALPIQYCSPPP 228 +H K +E E +K R KI+ L DG L LP +Y PP Sbjct: 291 MHAKALEYEDFDKFDRVRYPKIRYAGMLQYDGELKLPSRYLVSPP 335
>AT10A_MOUSE (O54827) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)| (P-locus fat-associated ATPase) Length = 1508 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = +2 Query: 185 TDASPSPSSTVLPLRFVFCLR--LRDNYYSQAGRPRLVVCC 301 TDASPSPS + + L L D + A + R V+CC Sbjct: 978 TDASPSPSLVIDGRSLAYALEKSLEDKFLFLAKQCRSVLCC 1018
>PHLX_RABIT (Q05017) Phospholipase AdRab-B precursor (EC 3.1.-.-)| Length = 1458 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +3 Query: 216 FSPSGLFFVCGSAIIIIRRQADPGWWFAANRCCLIRESPRDSHPRFGRLLSFFLS 380 FSPS L +C ++ R A+ W A +RE+P+ +L++ F S Sbjct: 118 FSPSALMPLCPETRLVPRGGAEDLWMQATELVRSMRENPQLDFEHDWKLINVFFS 172
>UL17_HHV11 (P10201) Protein UL17| Length = 703 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -3 Query: 220 ENSTGWGGRGVRPP 179 ENS WGGR RPP Sbjct: 403 ENSVAWGGRRARPP 416
>ZN273_HUMAN (Q14593) Zinc finger protein 273 (Zinc finger protein HZF9)| Length = 504 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +3 Query: 75 KHKIIHPSIHPYQ 113 KHKIIHP ++PY+ Sbjct: 186 KHKIIHPEVNPYK 198
>PCX_DROME (P18490) Protein pecanex| Length = 3433 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 65 CASKAQNNPSIHPSIPKG*RKKERKKSPLPEPSKS 169 C + +N S HP+ + +++ ++PLP PSKS Sbjct: 622 CPQPSVSNLSPHPNSVEAISGQQQMRNPLPPPSKS 656
>IRK4_MOUSE (P52189) Inward rectifier potassium channel 4 (Potassium channel,| inwardly rectifying subfamily J member 4) (Inward rectifier K(+) channel Kir2.3) (IRK3) Length = 445 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/64 (26%), Positives = 27/64 (42%) Frame = +3 Query: 141 SPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSAIIIIRRQADPGWWFAANRCCLI 320 SP P+ P +GG +P P P + +G G+ + + Q G+ F C+ Sbjct: 90 SPSVPAVGGPGGNGGESPNAPKPCIMHVNGFL---GAFLFSVETQTTIGYGFR----CVT 142 Query: 321 RESP 332 E P Sbjct: 143 EECP 146
>CG1_HUMAN (Q13495) CG1 protein (F18)| Length = 701 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = +3 Query: 135 GKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSA 254 G SP PSR P P PP P FSP L C S+ Sbjct: 262 GLSP--PSRPVPSLQPPPLPLPPPPPPFSPQSLMVSCMSS 299
>ZN607_HUMAN (Q96SK3) Zinc finger protein 607| Length = 371 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +3 Query: 60 TDARAKHKIIHPSIHPYQRDRERKK-GKSPHCPS 158 T + A H IIH IH + E K+ GK+ HC S Sbjct: 272 TFSHASHLIIHERIHTSDKPYECKRCGKAFHCAS 305
>MMP15_MOUSE (O54732) Matrix metalloproteinase-15 precursor (EC 3.4.24.-)| (MMP-15) (Membrane-type matrix metalloproteinase 2) (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix metalloproteinase) (MT2-MMP) (MT2MMP) Length = 657 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = +3 Query: 105 PYQRDRERKKGKSPHCPSRQ-NPIFDGGRTPRPPHP 209 P R R+ G+ H P R P GG+ RPP P Sbjct: 311 PLPTVRPRRPGRPDHQPPRPPQPPHPGGKPERPPKP 346
>HXA3_HETFR (Q9IA21) Homeobox protein Hox-A3| Length = 410 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 59 DRCASKAQNNPSIHPSIPKG*RKKERKKSPLPEPSKSNL*RGTDASPSPSST 214 + C + + PS HP I + ++K+ P P P + + T ++ + SST Sbjct: 66 ESCMRTSASQPSHHPVIAEQQQQKQPPPPPPPPPPSVSPPQNTSSNSTQSST 117
>CMF_DICDI (P34090) Conditioned medium factor (CMF) (Density-sensing factor)| Length = 571 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +1 Query: 97 PSIHTKGIEKERKE-KVPTARAVKIQSLTGDGRLALPIQYCS 219 P +H I KE ++ K+P A +I TG+G+L L YCS Sbjct: 324 PPLHE--ITKEMRDGKMPKELADRIGKSTGNGKLILTHGYCS 363
>IF2_WOLSU (Q7M7X5) Translation initiation factor IF-2| Length = 939 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 122 RKKERKKSPLPEPSKSN 172 +KK+ KK PLP P+K N Sbjct: 254 KKKKEKKKPLPAPTKKN 270
>ZN429_HUMAN (Q86V71) Zinc finger protein 429| Length = 588 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = +3 Query: 75 KHKIIHPSIHPYQRDRERKKGKSPHCPSRQNPIFDGGRTPRPPHPVLFSPSGLFFVCGSA 254 KHKIIH +PY+ + K +R I G P F G F C S Sbjct: 330 KHKIIHTGENPYKCEECGKAFNQSSRLTRHKKIHTG------EEPYKFEKCGRVFTCSST 383 Query: 255 I 257 + Sbjct: 384 L 384 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,084,641 Number of Sequences: 219361 Number of extensions: 1239428 Number of successful extensions: 3987 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3730 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3975 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
