>XLNR_ASPNG (O42804) Transcriptional activator xlnR|
          Length = 875

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 354 PAWVPLPAPWPCDWPS 307
           P W+PLP+P P ++PS
Sbjct: 268 PGWLPLPSPSPANFPS 283

>SHAN3_RAT (Q9JLU4) SH3 and multiple ankyrin repeat domains 3 (Shank3)|
            (Proline-rich synapse associated protein 2) (ProSAP2)
            (SPANK-2)
          Length = 1815

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 378  TPAGTRTRPAWVPLPAPWPCDWPSRLRRR 292
            +PA +   PAW+P+PA    + P+R  R+
Sbjct: 1235 SPAFSPRSPAWIPVPARREAEKPTREERK 1263

>PELB_COLGL (O59939) Pectate lyase B precursor (EC 4.2.2.2)|
          Length = 331

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 354 PAWVPLPAPWPCDWPSRLRRR 292
           P+W+PLPAP P   PS  RRR
Sbjct: 11  PSWLPLPAP-PPPLPSVTRRR 30

>RGMC_HUMAN (Q6ZVN8) Hemojuvelin precursor (Hemochromatosis type 2 protein)|
           (RGM domain family member C)
          Length = 426

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -1

Query: 375 PAGTRTRPAWVPLPAPWPCDWPSRLRRRH 289
           P G     A   LPAP PCD+  R  R H
Sbjct: 130 PRGPALPGAGSGLPAPDPCDYEGRFSRLH 158

>CFAH_BOVIN (Q28085) Complement factor H (H factor 1) (Fragments)|
          Length = 685

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = -1

Query: 384 RGTPAGTRTRPAWVPLP-APW-PCDWP 310
           RGT A T TR  WVP+P   W PC +P
Sbjct: 228 RGTDA-TCTRDGWVPVPRCAWKPCSYP 253

>LATS2_HUMAN (Q9NRM7) Serine/threonine-protein kinase LATS2 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 2) (Serine/threonine-protein
           kinase kpm) (Kinase phosphorylated during mitosis
           protein) (Warts-like kinase)
          Length = 1088

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 360 TRPAWVPLPAPWPCDWPS 307
           + PAWVP PAP P   P+
Sbjct: 461 SHPAWVPAPAPAPAPAPA 478

>Y2251_LISIN (Q929M4) Hypothetical UPF0324 membrane protein lin2251|
          Length = 335

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 393 VAGRGTPAGTRTRPAWVPLPAPW 325
           V  +   AGT+ R +W  LP PW
Sbjct: 231 VVAKMVNAGTKNRFSWAELPVPW 253

>Y2179_LISMF (Q71XL9) Hypothetical UPF0324 membrane protein LMOf2365_2179|
          Length = 335

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 393 VAGRGTPAGTRTRPAWVPLPAPW 325
           V  +   AGT+ R +W  LP PW
Sbjct: 231 VVAKMVNAGTKNRFSWAELPVPW 253

>Y2147_LISMO (Q8Y5B8) Hypothetical UPF0324 membrane protein lmo2147|
          Length = 335

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 393 VAGRGTPAGTRTRPAWVPLPAPW 325
           V  +   AGT+ R +W  LP PW
Sbjct: 231 VVAKMVNAGTKNRFSWAELPVPW 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.125    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,256,214
Number of Sequences: 219361
Number of extensions: 451493
Number of successful extensions: 1561
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)